mRNA_P-canaliculata_contig10060.136.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: D7FP83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP83_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 4.100e-94
Identity = 151/166 (90.96%), Postives = 157/166 (94.58%), Query Frame = 1

Query:    1 DMFDPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPAIAKDIPKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQA 498
            DMFDPSVFDI+MVMGVL  V+L+AYA+FRLFVR+VVGEDDFFADLGISYKDFDMPDEVDDYYEAKENP IA D  KLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQ AETMISEEIESVQ EADEIE GWSQSIWPLAMQLRT+LVQRREQA
Sbjct:   33 DMFDPSVFDIRMVMGVLACVSLLAYAIFRLFVRKVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIEPGWSQSIWPLAMQLRTVLVQRREQA 198

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A835Z738_9STRA (Pre protein translocase subunit Sec66-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z738_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.810e-59
Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = 1

Query:    1 DMFDPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPAIAKDIPKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQA 498
            D+FDPSVFD++MV+G L +  L++Y  +RL++ +VV  DDF ADLGISY DF++PDE+++YYEAKE  A   D   LRN LLKRAIADIPII+R+Q EGPG+ N+YQQAMIG++EW A+Q AE +I EEIE VQ EA+EIE GW Q IW +A +LR  L+QR++QA
Sbjct:   42 DIFDPSVFDMRMVLGALTLFGLLSYFAYRLYMNKVVAGDDFIADLGISYADFELPDEIEEYYEAKE--AAGDDATALRNPLLKRAIADIPIIMRLQKEGPGMQNLYQQAMIGDREWQAYQAAEALIGEEIEQVQAEAEEIEPGWGQQIWRMASELRQALLQRQQQA 205

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A1Z5KHC6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHC6_FISSO)

HSP 1 Score: 114 bits (286), Expect = 2.810e-25
Identity = 74/185 (40.00%), Postives = 101/185 (54.59%), Query Frame = 1

Query:    1 DMFDPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPAIA--------KDIPK----------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAE 501
            D  DP+ + +     V+V+  L   A      +    EDDFFA+L     +  +P EVD+YYE K     A        KD PK          L  AL+KRAIADIP++  +Q E  G+  +Y Q+M   K+W ++Q AE+++S+E+E V+ EADEIE GWSQSIW  AMQ   +L QR E  E
Sbjct:   46 DGIDPAFYLLGAAFAVIVIYFLXXRA------KXXXSEDDFFAELDGDKFNLKLPSEVDEYYETKAKCEAAGWEPGQPIKD-PKDQQATQPQRLLAQALMKRAIADIPMVQHIQKESSGMNKLYSQSMCSVKQWRSYQQAESLVSQEVEEVRAEADEIEPGWSQSIWRQAMQYHQMLKQRHELEE 223

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A7S3L5D8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5D8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.120e-25
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 1

Query:  115 DDFFADLGISYKDFDMPDEVDDYYEAKEN-----------PAIAKDIPK-----LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQ 495
            DDFFA L     +  +P EVD+YY+ KE            PA  ++        +  AL+KRAIADIPI+  +Q E PG+  +Y Q+M  EK+W A+Q AE ++S E++ V+ E+D+IE GWSQ IW  AMQ   +L QR EQ
Sbjct:   88 DDFFASLDTEKFNLKLPSEVDEYYKIKEKCESAGWEPGSKPATPQEAANGPHRVMAQALMKRAIADIPILQHIQKESPGMNKLYSQSMCSEKQWRAYQKAEALVSAEVDEVRRESDQIEPGWSQMIWRQAMQYHQMLKQRHEQ 230

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: K0T2G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2G4_THAOC)

HSP 1 Score: 107 bits (266), Expect = 3.000e-22
Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 1

Query:  115 DDFFADLGISYKDFDMPDEVDDYYEAKEN---------PAIAKDIPK-----LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAEA 504
            DDFF++L     +  +P  VD+YYE K             +A   P      L  AL+KR IADIPI+  +Q E  G+  +Y Q+M   K+W ++Q AE M+S E+E V+ EADEIE GWSQ++W  AMQ   ++ Q+ EQA++
Sbjct:   77 DDFFSNLDGDKFNIKLPSAVDEYYEVKAKCESDGWEPGQPMANGQPTNHHRLLAQALMKRCIADIPIVTHIQKESQGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEIEPGWSQAVWRQAMQYHNMIKQKEEQAKS 220

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A7S2S0P4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.200e-21
Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 1

Query:   10 DPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGEDD---FFADLGISYKDFDMPDEVDDYYEAKE--------------NPAIAKDIPK--LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRRE 492
            DP+++   +V+GVL +V +  +    L+ RR   +DD   FF+DL     + ++P  VD+YYE K+              N   A   P   L  AL+KR IADIP++  +Q E  G+  +Y Q+M   K+W  +Q AE M+S E+E V+ EADEIE GWSQ IW  AMQ   +L  R E
Sbjct:   48 DPAIY---LVLGVLAMVLIWYF----LYSRRSKKDDDDFAFFSDLDGEKFNLNLPAAVDEYYEVKDKCEDNGWEPGKPPTNQQEAASGPHRVLAQALMKRCIADIPLVTHIQKESAGMNKLYSQSMCSVKQWKTYQAAEAMVSAEVEEVRAEADEIEPGWSQVIWRQAMQYHNMLKNRHE 220

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A448YU82_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU82_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.330e-21
Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 1

Query:  109 GEDDFFADLGISYKDFD--MPDEVDDYYEAKENPAIAKDIPK--------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAE 501
             EDD+F+    SY+ F+  +P EVD+YY  KE    A   P               +  AL+KRAI DIPI+  +Q E  G+  +Y Q+M    +W A+Q AETM+S E++ V+ EADEIE GWSQ IW  AMQ   +L Q+ EQ +
Sbjct:   69 NEDDYFS----SYEKFNIKLPAEVDEYYSVKEKCMKAGWEPGKPPTDKNPNGPHRVMAQALMKRAIGDIPIVTFIQKESAGMNKLYSQSMCSVSQWRAYQNAETMVSTEVDEVRAEADEIEPGWSQVIWRQAMQYHGMLKQKHEQEQ 211

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: B8C1S0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1S0_THAPS)

HSP 1 Score: 103 bits (258), Expect = 2.590e-21
Identity = 68/179 (37.99%), Postives = 99/179 (55.31%), Query Frame = 1

Query:   10 DPSVFDIKMVMGVLVVVALVAYAVFRLFVRRVVGE-DDFFADLGISYKDFDMPDEVDDYYEAKEN-------PAIAKDIPK-------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQAE 501
            DP++F +  V+   VV     + V R+  +R   + DDFF++L     +  +P  VD+YY+ K         P  A    +       L  AL+KR IADIPI+  +Q E  G+  +Y Q+M   K+W ++Q AE M+S E+E V+ EADE+E GWSQ IW  AMQ   +L Q+ EQA+
Sbjct:   56 DPALFLLLAVVAFAVV-----FIVLRIRRKRASADVDDFFSNLDGDKFNLRLPAAVDEYYDVKAKAEEEGWEPGQAAQGKQPSAQHRALAQALMKRCIADIPIVTFIQRESAGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEVEPGWSQVIWRQAMQYHNMLKQKEEQAK 229

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: A0A6U3U3N1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U3N1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.890e-21
Identity = 63/158 (39.87%), Postives = 85/158 (53.80%), Query Frame = 1

Query:   82 FRLFVRRVVGEDD---FFADLGISYKDFDMPDEVDDYYEAKENPAIAKDIPK------------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRRE 492
            F ++ RR   +DD   FF++L     +  +P  VD+YYE K     A   P                   L  AL+KR IADIPI+  +Q E PG+  +Y Q+M   K+W ++Q AE M+S E++ V+ EADEIE GWSQ IW  AMQ   +L QR E
Sbjct:   63 FFIWYRRKKAQDDSNNFFSELDGEKFNLKLPAAVDEYYEVKAKCEEAGWEPGQGAGQGAAAANANGPHRVLAQALMKRCIADIPIVTHIQKESPGMNKLYSQSMCSVKQWRSYQAAEAMVSAEVDEVRAEADEIEPGWSQVIWRQAMQYHNMLKQRHE 220

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BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Match: B7FT11_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FT11_PHATC)

HSP 1 Score: 102 bits (255), Expect = 1.050e-20
Identity = 57/127 (44.88%), Postives = 75/127 (59.06%), Query Frame = 1

Query:  160 MPDEVDDYYEAKE--------------NPAIAKDIPK-LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQMAETMISEEIESVQTEADEIESGWSQSIWPLAMQLRTLLVQRREQ 495
            +P EVD+YY  KE              NPA A    + L  AL+KRAIADIPI+  +Q E  G+  +Y Q+M    +W ++Q AE ++S E+E V+ EADEIE GWSQ IW  AMQ   +L Q+ EQ
Sbjct:  131 LPGEVDEYYAVKEKCESMGWEPGQTAQNPAQASPAHRALAQALMKRAIADIPIVTHIQKESSGMNKLYSQSMCSVNQWRSYQAAEQLVSTEVEEVRAEADEIEPGWSQVIWRQAMQYHQMLKQKHEQ 257

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig10060.136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D7FP83_ECTSI	4.100e-94	90.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z738_9STRA	1.810e-59	60.84	Pre protein translocase subunit Sec66-domain-conta...	[more]
A0A1Z5KHC6_FISSO	2.810e-25	40.00	Uncharacterized protein n=2 Tax=Fistulifera solari...	[more]
A0A7S3L5D8_9STRA	5.120e-25	43.36	Hypothetical protein (Fragment) n=1 Tax=Amphora co...	[more]
K0T2G4_THAOC	3.000e-22	40.97	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2S0P4_9STRA	1.200e-21	38.89	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A448YU82_9STRA	2.330e-21	42.18	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
B8C1S0_THAPS	2.590e-21	37.99	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A6U3U3N1_9STRA	5.890e-21	39.87	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
B7FT11_PHATC	1.050e-20	44.88	Predicted protein n=1 Tax=Phaeodactylum tricornutu...	[more]

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