prot_M-pyrifera_M_contig124388.4952.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124388.4952.1
Unique Nameprot_M-pyrifera_M_contig124388.4952.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length134
Homology
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: UPI00145ABF38 (LacI family transcriptional regulator n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI00145ABF38)

HSP 1 Score: 135 bits (339), Expect = 5.880e-36
Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    1 MVEAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASP 131
            M  AG       IVY    +E GR G  +L++ANP LTA+VCFNV+AA+GA++    R L +P D+S+VAIHD+  A+ L  PLTTVAMPLFE+G RAVE+  D T    GTS ID  +PEL++R+S A P
Sbjct:  204 MAAAGIDHGAGQIVYCSSDMESGRTGCAQLLDANPELTAVVCFNVMAAVGAMKEIWSRNLDIPGDISVVAIHDVSFAEFLKAPLTTVAMPLFELGKRAVEIAIDGTRP-KGTSTIDNAEPELIMRASTAGP 333          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: UPI001455E46A (LacI family transcriptional regulator n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI001455E46A)

HSP 1 Score: 114 bits (284), Expect = 7.060e-28
Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = 0
Query:    5 GEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASP 131
            G   +E+ +VY  P  + G  G + L++ +P+LTA+VCFNVV+A+GAL+  + RGL VPDDLSI+AIHD++ A  LS PL+ V+ PL EMG  AVE V         T+ + T+ P L++R+S + P
Sbjct:  205 GSHVNEDLVVYSAPHSDAGAEGTSELLDRHPDLTAIVCFNVVSAVGALREIRARGLNVPDDLSIIAIHDVKFAQDLSTPLSVVSTPLAEMGQLAVETVCSPPETSQSTTRVLTK-PTLLLRNSTSKP 330          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: UPI001491F187 (LacI family transcriptional regulator n=1 Tax=unclassified Roseobacter TaxID=196798 RepID=UPI001491F187)

HSP 1 Score: 111 bits (278), Expect = 5.440e-27
Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    3 EAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASPLR 133
            E G  ADE  ++Y  P+  +G      L+  +P+LT LVCFN VAA+GAL+AA+  G  VP DLS++AIHD++ A  L VPLT V MPL EMG  ++ ++     G   T    T  PELV+R SA  P+R
Sbjct:  203 EMGGDADEVCVIYSGPTAPEGEVATHDLLTRHPDLTGLVCFNAVAAVGALRAARAMGRNVPGDLSVIAIHDLKFAGDLRVPLTVVRMPLAEMGRVSIGMIC-APNGARATIHRITTPPELVIRESATPPVR 332          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A7Z0WSK2_9PSEU (HTH lacI-type domain-containing protein n=1 Tax=Actinophytocola xinjiangensis TaxID=485602 RepID=A0A7Z0WSK2_9PSEU)

HSP 1 Score: 107 bits (267), Expect = 2.270e-25
Identity = 61/133 (45.86%), Postives = 82/133 (61.65%), Query Frame = 0
Query:    1 MVEAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPE--LVVRSSAASP 131
            +  AG  AD   +V G  +++ G AG   L+   P  T +V  NV+AAIGAL AA++ GLRVP+DLS++A HD+  A HL   LT VAMP+ E+GA AV L+ ++  G D   ++  RDPE  LV R S A P
Sbjct:  203 LTRAGLSADPGWLVAGGHTVDSGLAGMRELLAVRPAPTGVVVGNVLAAIGALTAAREAGLRVPEDLSVIAFHDVTYAGHLVPSLTAVAMPMRELGAAAVALLLERLGGADPRHVV-VRDPEPMLVARGSTAPP 334          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A6L7KM42_9RHOB (LacI family transcriptional regulator n=2 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7KM42_9RHOB)

HSP 1 Score: 106 bits (265), Expect = 4.300e-25
Identity = 60/131 (45.80%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    3 EAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASPLR 133
            E G  AD + + +  P + +G A    L+   P++T LVCFNVVAAIGA +AA   GL VP DLS+V+IHDI+ A+ L VPLT V MPL E+G  A   V  +   +     I+T  PE V R S A P R
Sbjct:  203 EMGADADPSLVAHAGPFVTEGEAATRELLLLRPDITGLVCFNVVAAIGATRAASALGLDVPRDLSVVSIHDIKFAEDLKVPLTVVRMPLAELGQVATRTVCIEAPELPARIAIET-SPEFVQRQSTAEPGR 332          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A7J9XAH5_9ACTN (LacI family DNA-binding transcriptional regulator n=1 Tax=Streptosporangiales bacterium TaxID=2604148 RepID=A0A7J9XAH5_9ACTN)

HSP 1 Score: 102 bits (253), Expect = 2.460e-23
Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    6 EPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASP 131
            EP D    ++ +P  E G     RL++ +P+LTA+V  NV+AAIGAL AA DRG  VP D+S++AIHD+ LA  +   LTTV +PL E+G + V+L++D T   D + ++    P L+ R+S A P
Sbjct:  211 EPTDWLWGLWNEP--ESGARVMGRLLDRSPDLTAVVVCNVIAAIGALGAASDRGYEVPRDISVLAIHDLPLARFVRPALTTVQLPLAELGRQGVDLLADSTRAADASLVVSEPAPALIPRASTAPP 334          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A6L7KQV5_9RHOB (LacI family transcriptional regulator n=2 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7KQV5_9RHOB)

HSP 1 Score: 101 bits (251), Expect = 4.670e-23
Identity = 59/131 (45.04%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    3 EAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASPLR 133
            E G  AD + + +  P   +G A    L+  +  +T LVCFNV+AAIGA +AA   GL VP DLSI +IHD++ A+ L VPLT V MPL EMG  A   V  K   +     I T  PE V R S A+P R
Sbjct:  203 EMGADADPSLVAHAAPVAAEGEAATRELLLRHTEITGLVCFNVIAAIGATRAAGALGLDVPRDLSIASIHDVKFAEDLKVPLTVVRMPLAEMGQVAARTVCIKGAELPARMAIAT-SPEFVQRQSTAAPGR 332          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A5C8UTM8_9MICO (LacI family transcriptional regulator n=1 Tax=Lacisediminihabitans profunda TaxID=2594790 RepID=A0A5C8UTM8_9MICO)

HSP 1 Score: 100 bits (250), Expect = 6.800e-23
Identity = 61/131 (46.56%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    1 MVEAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASP 131
            M EAG   +E  +     +  DGRA A RL+E+    TALV  N+ AA+G L    DR LRVP D+SIVA+HD+  AD    P+TTV MPL E+GA AV  ++D  +G+  T ++D+  P+LVVR S A+P
Sbjct:  204 MAEAGLSPEEAWMTRLGYAGTDGRAAAVRLLESATLPTALVVANLNAALGVLAEIHDRDLRVPGDISIVAMHDVWYADATWPPITTVRMPLSELGAAAVVALADSGSGVIHT-VLDSPAPQLVVRRSTAAP 333          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A1Q8CKB8_9PSEU (HTH lacI-type domain-containing protein n=2 Tax=Actinophytocola xanthii TaxID=1912961 RepID=A0A1Q8CKB8_9PSEU)

HSP 1 Score: 99.8 bits (247), Expect = 1.680e-22
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 0
Query:    4 AGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRD---PELVVRSSAASP 131
            AGEP  E  +V    S E GRA A +L++ +P +TA+   N V A+GAL+A  +RGLR+PD+ S+V   D+  A++L  PLTTV +P  E G RA  L+ D+  G      I  RD    ELVVR+S +SP
Sbjct:  204 AGEPLPEQRVVEADWSFESGRAAAHQLLDTDPTVTAVFAHNDVIAVGALKALHERGLRLPDNCSVVGCDDLSFAEYLVPPLTTVRIPFQETGERAATLLLDRIGGRQ----IRARDLLPVELVVRASTSSP 330          
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Match: A0A0D8HMW0_RHOSX (Ribose operon repressor n=1 Tax=Rhodococcus sp. (strain AD45) TaxID=103808 RepID=A0A0D8HMW0_RHOSX)

HSP 1 Score: 99.0 bits (245), Expect = 3.640e-22
Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 0
Query:    5 GEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIGALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVELVSDKTTGIDGTSIIDTRDPELVVRSSAASPL 132
            G  A    + +   S  DG A  +RL++     TA+V  N +AA+G + AAQD G+ +P DLSIVAIHD+ELAD L   LTTV MPL  +G RAVELV     G  G  II++  PELV+R S    L
Sbjct:  211 GLEAPNGRLGWAGSSPADGYAAFSRLLKKGERPTAVVVSNAMAAVGVMAAAQDAGIVIPRDLSIVAIHDLELADFLRPALTTVRMPLEALGQRAVELVLGGDVG--GEVIINSPAPELVIRGSTGPAL 336          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124388.4952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00145ABF385.880e-3651.91LacI family transcriptional regulator n=1 Tax=Nitr... [more]
UPI001455E46A7.060e-2845.67LacI family transcriptional regulator n=1 Tax=Prim... [more]
UPI001491F1875.440e-2745.80LacI family transcriptional regulator n=1 Tax=uncl... [more]
A0A7Z0WSK2_9PSEU2.270e-2545.86HTH lacI-type domain-containing protein n=1 Tax=Ac... [more]
A0A6L7KM42_9RHOB4.300e-2545.80LacI family transcriptional regulator n=2 Tax=uncl... [more]
A0A7J9XAH5_9ACTN2.460e-2343.65LacI family DNA-binding transcriptional regulator ... [more]
A0A6L7KQV5_9RHOB4.670e-2345.04LacI family transcriptional regulator n=2 Tax=uncl... [more]
A0A5C8UTM8_9MICO6.800e-2346.56LacI family transcriptional regulator n=1 Tax=Laci... [more]
A0A1Q8CKB8_9PSEU1.680e-2244.27HTH lacI-type domain-containing protein n=2 Tax=Ac... [more]
A0A0D8HMW0_RHOSX3.640e-2246.88Ribose operon repressor n=1 Tax=Rhodococcus sp. (s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 2..88
e-value: 2.8E-31
score: 111.0
NoneNo IPR availableGENE3D3.40.50.2300coord: 89..106
e-value: 2.8E-31
score: 111.0
NoneNo IPR availablePFAMPF13377Peripla_BP_3coord: 19..127
e-value: 2.6E-22
score: 79.9
NoneNo IPR availablePANTHERPTHR30146:SF101coord: 3..131
NoneNo IPR availablePANTHERPTHR30146LACI-RELATED TRANSCRIPTIONAL REPRESSORcoord: 3..131
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 1..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124388contigM-pyrifera_M_contig124388:31..432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124388.4952.1mRNA_M-pyrifera_M_contig124388.4952.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124388 1..432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124388.4952.1 ID=prot_M-pyrifera_M_contig124388.4952.1|Name=mRNA_M-pyrifera_M_contig124388.4952.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
MVEAGEPADENSIVYGQPSIEDGRAGATRLIEANPNLTALVCFNVVAAIG
ALQAAQDRGLRVPDDLSIVAIHDIELADHLSVPLTTVAMPLFEMGARAVE
LVSDKTTGIDGTSIIDTRDPELVVRSSAASPLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028082Peripla_BP_I