mRNA_M-pyrifera_M_contig12412.4915.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A6H5JPM6_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPM6_9PHAE) HSP 1 Score: 149 bits (377), Expect = 5.070e-40 Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQK 247
PYSDATAEKMDLEAR+MVDSAYQRTLELVE KKEQIK+VAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQK
Sbjct: 824 PYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQIKLVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQK 905
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A835YSU3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU3_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.800e-24 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQKDAGAA 262
PYSD TAE MD EA+ MVD A+QRTL+LV K Q++ +AELLL+KETINHDD+++++G RPF +HKSY EF+ A K K+AG +
Sbjct: 600 PYSDHTAEVMDTEAKTMVDKAFQRTLDLVAKHKHQVEAIAELLLKKETINHDDMLAVLGPRPFASHKSYEEFVHATMHGKSKEAGGS 686
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A7S2IDC1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IDC1_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.480e-23 Identity = 51/84 (60.71%), Postives = 67/84 (79.76%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFIS---ANEDAKQ 244
PYSDATAE MD EARQ+VD+AYQRTL+L+ KKE+++ VA LLL+KETI HDD++ +IG RPFK +Y E++S AN+ AK+
Sbjct: 237 PYSDATAEAMDEEARQIVDAAYQRTLDLIREKKEEVEKVANLLLDKETITHDDIIDIIGPRPFKGDAAYNEYVSTRLANKKAKE 320
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A7S1DCK3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCK3_CYCTE) HSP 1 Score: 97.8 bits (242), Expect = 1.170e-22 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAK 241
PYSDATAE MD EAR +V AYQRTL+L+E K ++KMVA LLEKETI HDD+V L+G RPF+ Y EF+S E AK
Sbjct: 191 PYSDATAEAMDEEARSIVREAYQRTLDLIEEHKSEVKMVATTLLEKETITHDDIVDLVGPRPFEGDDQYKEFVSKREAAK 270
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A1E7F2E8_9STRA (AAA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2E8_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.770e-22 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFIS 223
PYSD+TAE MD EAR +VD+AYQRT+EL+++KKE+++ VAE+LLEKETI HDD++ LIG RPFK Y E+IS
Sbjct: 578 PYSDSTAEAMDEEARAIVDAAYQRTVELIQDKKEEVERVAEMLLEKETITHDDIIDLIGERPFKGDTQYNEYIS 651
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A7S3JS57_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS57_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.450e-22 Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANED 235
PYSDATA+ MD EA+ +VDSAYQRTL+L+ +KK+++ +A LL++KETINHDD+V+ +G RPF HK Y EFIS+ D
Sbjct: 700 PYSDATAQAMDEEAKSIVDSAYQRTLDLLASKKDEVTRLANLLIKKETINHDDIVACLGQRPFSPHKQYAEFISSRYD 777
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A7S2V9Y9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9Y9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.140e-22 Identity = 47/85 (55.29%), Postives = 68/85 (80.00%), Query Frame = 2
Query: 5 YSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISAN--EDAKQKDA 253
YSDATA+ MD EA+++VD AY+RT+EL++ KK+Q++++A+LLLEKETIN DD++ IG RPF H++Y EFI ++ E AK + A
Sbjct: 19 YSDATAQMMDEEAKKIVDEAYKRTVELIKEKKDQVELLAQLLLEKETINVDDVIKTIGPRPFNTHQTYEEFIHSDWKEPAKSESA 103
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A7S2WKY8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKY8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.200e-22 Identity = 47/75 (62.67%), Postives = 63/75 (84.00%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISA 226
PYSDATA+ MD EA+++VD+AYQRTL++V +KE+I+ +AELLLEKETINHDD++ LIG RPF + Y E+IS+
Sbjct: 629 PYSDATAQAMDEEAKKLVDTAYQRTLDIVRERKEEIEKMAELLLEKETINHDDIIHLIGHRPFDTNPQYAEYISS 703
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: A0A7S2FU06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU06_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 6.570e-22 Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 2
Query: 2 PYSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFIS 223
PYSDATA+ MD EA++MVD AY+RTL+L+ KK ++ VAE+LL+KETINHDD+V IG RPF+ +K Y EFIS
Sbjct: 208 PYSDATAQAMDEEAKKMVDVAYERTLQLMREKKPEVTAVAEMLLDKETINHDDIVGAIGHRPFEPNKQYAEFIS 281
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Match: B7GCH1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCH1_PHATC) HSP 1 Score: 97.4 bits (241), Expect = 1.140e-21 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 2
Query: 5 YSDATAEKMDLEARQMVDSAYQRTLELVENKKEQIKMVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQKD 250
YSD+TAE MD EAR +VD AYQRT++L+ KK Q++MVA LLLEKETI HDDLV LIGARPF+ +Y E++S K+K+
Sbjct: 548 YSDSTAEAMDDEARAIVDEAYQRTVDLMTEKKAQVEMVANLLLEKETITHDDLVDLIGARPFQGDSAYQEYVSGRGPMKKKE 629 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12412.4915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12412.4915.1 >prot_M-pyrifera_M_contig12412.4915.1 ID=prot_M-pyrifera_M_contig12412.4915.1|Name=mRNA_M-pyrifera_M_contig12412.4915.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp ALLRRDGGKNGLGGEADGGQRVPANARAGREQEGADQDGGRAPAGEGDHQback to top mRNA from alignment at M-pyrifera_M_contig12412:6812..7667- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12412.4915.1 ID=mRNA_M-pyrifera_M_contig12412.4915.1|Name=mRNA_M-pyrifera_M_contig12412.4915.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=856bp|location=Sequence derived from alignment at M-pyrifera_M_contig12412:6812..7667- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12412:6812..7667- >mRNA_M-pyrifera_M_contig12412.4915.1 ID=mRNA_M-pyrifera_M_contig12412.4915.1|Name=mRNA_M-pyrifera_M_contig12412.4915.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig12412:6812..7667- (Macrocystis pyrifera P11B4 male)back to top |