mRNA_M-pyrifera_M_contig124009.4901.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: F0ZYJ6_DICPU (acidPPc domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZYJ6_DICPU) HSP 1 Score: 120 bits (300), Expect = 5.630e-29 Identity = 58/138 (42.03%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPF 414
+AR+ LGVHYPSDCV G GA++C AG D++GC SC + +CYA + S IT +MS + + L+ ++ I+ +M P+ FW KC+R +G+L P FQL LCP+ GGSL+ P P W++Y F
Sbjct: 339 FARINLGVHYPSDCVGGVIQGAIVCIAGTAFRKVDIVGCRSCWDDSCYAAIDSAQEITFAHMSRLNFIMLVSLVLLFLVVPIVSVMKPVDFWSKCDRVYGMLFPAIAFQLLLLCPSSYHLGGSLSKPHNPH-WYSYIF 475
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: L8H555_ACACA (PAP2 superfamily domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H555_ACACA) HSP 1 Score: 118 bits (296), Expect = 8.110e-29 Identity = 59/137 (43.07%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREG-ACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAY 408
+AR+ LGVHYPSDCV G GA IC G LL DV+GCTSC CY+ T IT + WW + A + + P+ FW KC+R +G+L PC F++ FLCP SLAAP PP W++Y
Sbjct: 244 FARINLGVHYPSDCVGGLLQGAAICVVGTLLWELDVIGCTSCSSSDTCYS--TEDDAITWHTLGRANWWVFVCLFAVMAGIVGVCLAKPLDFWAKCDRVYGMLFPCVAFRVTFLCPVSLNDHASLAAPTWPPAWYSY 378
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: UPI000644A4B4 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A4B4) HSP 1 Score: 112 bits (279), Expect = 2.760e-26 Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLAT---ILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPFAV 420
+AR+ LGVHYPSDC++G G ++C G L D+LGC SC + CY+ TSPA T + S +G ++ S +L I+ +M P+ FW KC+R +G+L P FQL FLCP + SL P P W++Y FA+
Sbjct: 267 FARINLGVHYPSDCLLGVLQGTIVCLVGTGLRSLDILGCWSCWDNGCYS--TSPA--TTLEFSTLGRLNFIMLSCLIILCVLIPIVTVMKPVDFWSKCDRVYGMLFPSIFFQLLFLCPKAYSEHASLPKPPSPH-WYSYLFAI 404
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: D3BSK9_POLPP (acidPPc domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BSK9_POLPP) HSP 1 Score: 111 bits (278), Expect = 1.110e-25 Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPFAV 420
+AR+ LGVHYPSDCV G G ++C G L D+LGC SC +G CYA +S I+ + + + L + + ++ +M P+ FW KC+R +G+L P VFQL FLCP + GSL P P W+++ F +
Sbjct: 478 FARINLGVHYPSDCVGGVIQGTLVCLIGTGLRSLDILGCKSCWDGGCYA-TSSTCSISFGTLDRLNFIMLSILLLLCIFVPVITVMKPVDFWSKCDRVYGMLFPSMVFQLLFLCPRSYSLAGSLPVPPRPH-WYSFVFGI 615
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: Q54UH9_DICDI (acidPPc domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54UH9_DICDI) HSP 1 Score: 110 bits (276), Expect = 1.550e-25 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPF 414
+AR+ LGVHYPSDCV G G ++C G D+LGC SC + CYA + S IT +++ + + L+ ++ I+ +M P+ FW KC+R +G+L P FQL LCP+ GSL+ P P W+++ F
Sbjct: 389 FARINLGVHYPSDCVGGVIQGTLVCVIGTAFRKIDILGCRSCWDEMCYAPINSAQEITFSHLNRLNFIMLVALLLIFLIIPIVSVMKPVDFWSKCDRVYGMLFPAIAFQLLLLCPSSYRLNGSLSKPSTPH-WYSFVF 525
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: A0A8J4Q4A5_9MYCE (acidPPc domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q4A5_9MYCE) HSP 1 Score: 109 bits (272), Expect = 5.540e-25 Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVN-MSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPF 414
+AR+ LGVHYPSDCV G G V+C G AD++GC SC +G CYA + S R+ ++ + + + L + A ++ I+ +M P+ FW KC+R +G+L P FQL LCP + GSL P P W++Y F
Sbjct: 384 FARINLGVHYPSDCVGGVIQGVVVCLLGTGFRKADIVGCRSCWDGGCYAQIES--RVLSLHTLDRLNFIMLCVLLALFIVIPIVSVMRPVDFWSKCDRVYGMLFPAVAFQLLMLCPRSYSLNGSLPKPSYPE-WYSYLF 519
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: UPI0006451B53 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451B53) HSP 1 Score: 107 bits (266), Expect = 3.340e-24 Identity = 54/143 (37.76%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLATIL---FMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPFAV 420
+AR+ LGVHYPSDC G GA++C G L D+ GC SC +GACYA ++P+ + ++ S +G ++ + V+ ++ +M P+ FW KC+R +G+L P FQL FLCP ++ SL P +P W+++ F +
Sbjct: 364 FARINLGVHYPSDCAAGVLQGALVCLIGTGLRSLDISGCRSCWDGACYA--STPSCV--LSFSTLGRLNFVMMAVLIVICIVIPIVSVMKPVDFWSKCDRVYGMLFPSVCFQLLFLCPRSYSTNASLPKPPVPH-WYSFIFGI 501
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: A0A152A6H8_9MYCE (acidPPc domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6H8_9MYCE) HSP 1 Score: 103 bits (256), Expect = 3.290e-23 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 1 WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGVTSPARITPVNMSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPFAVFAPAVAVV 444
+AR+ LGVHYPSDCV G G ++C G DV+GC SC +CYA T ++ N+ + + + A ++ I+ M P+ FW KC+R +G+L P FQL FLCP SL P P W+++ F++ +A++
Sbjct: 223 FARINLGVHYPSDCVGGVIQGTMVCLIGTSFRAIDVVGCRSCWNDSCYA-TTLSQTLSFSNLGRLNYVMFAILLALCIIIPIVSTMKPVDFWSKCDRVYGMLFPAVCFQLLFLCPKSYDISASLPHPPSPS-WYSFMFSLSIALIAII 368
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: A0A6B2L6R0_9EUKA (acidPPc domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L6R0_9EUKA) HSP 1 Score: 100 bits (248), Expect = 3.760e-22 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 4 ARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCRE-GACYAGVTSPARITPVNMSA---IGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSGGSLAAPLLPPVWWAYPFAV 420
+R+YLGVHYPSDC+ G LG V+C + + AD GC + G CY + + P+ + I WW L + +L ++ PI+FW K FG+L P F+ FLCP GS S++A LLPP W++ F++
Sbjct: 194 SRIYLGVHYPSDCLGGMILGYVVCSISMFIYRADQAGCECAQTAGFCYYSNATMDILQPITLQTLTHINWWVLGGVVFGQFVFAVLCVIRPIKFWIKFGTIFGILFPALTFRFVFLCPTGSHPA-SISANLLPPSGWSFIFSI 335
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Match: UPI001D042E72 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D042E72) HSP 1 Score: 99.4 bits (246), Expect = 2.100e-21 Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 1
Query: 4 ARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGA-----------CYAGVTSPAR-ITPV---NMSAIGWWPLLLSSAASVLATILFMMPPIQFWEKCERAFGLLAPCFVFQLAFLCPNGSTSG-GSLAAPLLPPVWWAYPFA 417
AR+YLGVHYPSDC+ GA G + G + + CT+C + CYA + IT V N+S + W+ + S S+L ILF++ PIQF+ K F +LAPC FQ FLCP S +G ++ P L P W++Y +A
Sbjct: 492 ARIYLGVHYPSDCLFGALQGLLSIILGTICYMIHLSICTTCAGNSDSTIYWNGLMPCYASLEESVNLITEVGRSNLSHVNWYLFCILSIGSLLVGILFVIKPIQFYTKFHHVFSMLAPCLTFQYCFLCPTLSLNGVATIPKPSLFPPWFSYLYA 645 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124009.4901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124009.4901.1 >prot_M-pyrifera_M_contig124009.4901.1 ID=prot_M-pyrifera_M_contig124009.4901.1|Name=mRNA_M-pyrifera_M_contig124009.4901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp WARVYLGVHYPSDCVVGAALGAVICGAGLLLLFADVLGCTSCREGACYAGback to top mRNA from alignment at M-pyrifera_M_contig124009:77..520- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124009.4901.1 ID=mRNA_M-pyrifera_M_contig124009.4901.1|Name=mRNA_M-pyrifera_M_contig124009.4901.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig124009:77..520- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124009:77..520- >mRNA_M-pyrifera_M_contig124009.4901.1 ID=mRNA_M-pyrifera_M_contig124009.4901.1|Name=mRNA_M-pyrifera_M_contig124009.4901.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig124009:77..520- (Macrocystis pyrifera P11B4 male)back to top |