prot_M-pyrifera_M_contig12382.4869.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12382.4869.1
Unique Nameprot_M-pyrifera_M_contig12382.4869.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
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BLAST of mRNA_M-pyrifera_M_contig12382.4869.1 vs. uniprot
Match: D7G8I9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 8.980e-12
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 0 
Query:    7 AIRARNFLLELLEYPGVEAAISEARGWGEVERLSSALRE 45
            AIRARNF+LELLE+PGVE A+S+ARGWGE+ERLS+ LR+
Sbjct: 1294 AIRARNFVLELLEFPGVELAVSQARGWGELERLSTELRK 1332
[Close]
BLAST of mRNA_M-pyrifera_M_contig12382.4869.1 vs. uniprot
Match: D7FV49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV49_ECTSI)

HSP 1 Score: 48.1 bits (113), Expect = 4.120e-5
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    7 AIRARNFLLELLEYPGVEAAISEARGWGEVERLSSALR 44
            A+RAR F+L LLE  GVE AI EA GWG VE  +S+L+
Sbjct: 1762 AVRARKFVLSLLELEGVEEAIVEAGGWGNVEMWASSLK 1799
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12382.4869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8I9_ECTSI8.980e-1276.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV49_ECTSI4.120e-560.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12382contigM-pyrifera_M_contig12382:8299..8436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12382.4869.1mRNA_M-pyrifera_M_contig12382.4869.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12382 8299..8436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12382.4869.1 ID=prot_M-pyrifera_M_contig12382.4869.1|Name=mRNA_M-pyrifera_M_contig12382.4869.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
MVPRNTAIRARNFLLELLEYPGVEAAISEARGWGEVERLSSALRE*
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