prot_M-pyrifera_M_contig123808.4868.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123808.4868.1
Unique Nameprot_M-pyrifera_M_contig123808.4868.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
BLAST of mRNA_M-pyrifera_M_contig123808.4868.1 vs. uniprot
Match: A0A5A8E306_CAFRO (Histone acetyltransferase n=8 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E306_CAFRO)

HSP 1 Score: 69.3 bits (168), Expect = 3.060e-11
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 0
Query:    1 REVYPAAVFDRMREYGMAVWRCRHPGVCHAVHEMLSGVRELLYAGAVRSVSVVLLGASGEAIEQVVFEVDTLGLAADRESP-SKEDLNEMFASTLLKIVASESILG 105
            R VYPAA F+R +++G  V+  RHPGV   + + LS  RE +  G VR V +VLL A G A+EQ  F VD    A D   P + ++   +F   L KI    S+LG
Sbjct:   25 RSVYPAATFERRKQFGAPVYVSRHPGVTALIGDTLSSAREAIAKGGVREVHLVLLDAEGVAVEQYGFAVDA---ALDPAVPVTLDEATMLFGGALTKI----SLLG 123          
BLAST of mRNA_M-pyrifera_M_contig123808.4868.1 vs. uniprot
Match: A0A482RNC8_9ARCH (HORMA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNC8_9ARCH)

HSP 1 Score: 63.9 bits (154), Expect = 4.840e-10
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    6 AAVFDRMREYGMAVWRCRHPGVCHAVHEMLSGVRELLYAGAVRSVSVVLLGASGEAIEQVVFEVDTLGLAADRESPSK-EDLNEMFASTLLKIVASESILGPTSDKVELFDILIE 119
            A VF+R +EYG+AV+  RHPG+  ++HE+L   R  +  G V  + +V+L A+G AIEQ  F+++   + A  E P+   D+    AS LL++   E+   P   +   F I+++
Sbjct:    5 AEVFERRKEYGIAVFMSRHPGLNASIHEVLFHTRSAICDGLVECIVLVILDATGTAIEQYSFQIN---VRATPEVPATYADVEAALASALLRLGTLEAT-APELPRDATFTIMVQ 115          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123808.4868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5A8E306_CAFRO3.060e-1141.51Histone acetyltransferase n=8 Tax=Cafeteria roenbe... [more]
A0A482RNC8_9ARCH4.840e-1034.78HORMA domain-containing protein n=1 Tax=archaeon T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 1..123
e-value: 4.4E-25
score: 90.4
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 1..122
NoneNo IPR availablePANTHERPTHR11842:SF10MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Bcoord: 1..120
NoneNo IPR availablePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 1..120
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 1..123
score: 18.939

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123808contigM-pyrifera_M_contig123808:6..374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123808.4868.1mRNA_M-pyrifera_M_contig123808.4868.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123808 6..374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123808.4868.1 ID=prot_M-pyrifera_M_contig123808.4868.1|Name=mRNA_M-pyrifera_M_contig123808.4868.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
REVYPAAVFDRMREYGMAVWRCRHPGVCHAVHEMLSGVRELLYAGAVRSV
SVVLLGASGEAIEQVVFEVDTLGLAADRESPSKEDLNEMFASTLLKIVAS
ESILGPTSDKVELFDILIEADRD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036570HORMA_dom_sf
IPR003511HORMA_dom