prot_M-pyrifera_M_contig123742.4853.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig123742.4853.1
Unique Name	prot_M-pyrifera_M_contig123742.4853.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	161

Homology

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A1M7ZM72_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Pseudoxanthobacter soli DSM 19599 TaxID=1123029 RepID=A0A1M7ZM72_9HYPH)

HSP 1 Score: 290 bits (742), Expect = 1.280e-93
Identity = 141/158 (89.24%), Postives = 151/158 (95.57%), Query Frame = 0

Query:    4 RANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            R N+ EF+VSEIAF+VKRTIEDAYG VRVRGEISGYRGPHSSGHAYFSLKDDKAR+EAVVWR  FQRLRF+PEEGMEV+ATGKLTTFPGGSKYQIVIEALEPAGVGALMALLE+RR+ LAAEGLFDE RK+PLPFLPRV+GVVTSPTGAVIRDILHRL
Sbjct:   13 RGNIGEFTVSEIAFSVKRTIEDAYGHVRVRGEISGYRGPHSSGHAYFSLKDDKARIEAVVWRGVFQRLRFRPEEGMEVVATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEDRRRRLAAEGLFDEVRKKPLPFLPRVVGVVTSPTGAVIRDILHRL 170

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI00094979A9 (exodeoxyribonuclease VII large subunit n=1 Tax=Mongoliimonas terrestris TaxID=1709001 RepID=UPI00094979A9)

HSP 1 Score: 286 bits (732), Expect = 8.570e-93
Identity = 140/161 (86.96%), Postives = 153/161 (95.03%), Query Frame = 0

Query:    1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            +ETR NVAE+SVSEI+FA+KRT+E+ +G VRVRGEISGYRGPHSSGHAYF+LKDD AR+EAVVWRT+F RLRFKPEEGMEVIATGKLTTFPG SKYQIVIEALEPAGVGALMALLEER+K LAAEGLFD ARKRPLPFLPRV+GVVTSPTGAVIRDILHR+
Sbjct:    2 SETRPNVAEYSVSEISFALKRTVEEQFGHVRVRGEISGYRGPHSSGHAYFALKDDGARLEAVVWRTAFSRLRFKPEEGMEVIATGKLTTFPGSSKYQIVIEALEPAGVGALMALLEERKKKLAAEGLFDAARKRPLPFLPRVVGVVTSPTGAVIRDILHRI 162

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI000845C9F1 (exodeoxyribonuclease VII large subunit n=1 Tax=Methylobrevis pamukkalensis TaxID=1439726 RepID=UPI000845C9F1)

HSP 1 Score: 275 bits (702), Expect = 2.420e-90
Identity = 133/156 (85.26%), Postives = 148/156 (94.87%), Query Frame = 0

Query:    6 NVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            N AEF+VSEI+FA+KRT+EDA+G VRVRGEISGYRGPHSSGHAYF+LKDDKAR+EAVVWR +  RLRF+PEEGMEVIATGKLTT+PG SKYQIVIEALEPAGVGALMA+LEER++ LAAEGLFD ARKRPLP+LPRVIGVVTSPTGAVIRDILHR+
Sbjct:   21 NAAEFTVSEISFALKRTVEDAFGNVRVRGEISGYRGPHSSGHAYFALKDDKARIEAVVWRPTMGRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMAMLEERKRRLAAEGLFDPARKRPLPYLPRVIGVVTSPTGAVIRDILHRV 176

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A6A7Y1Q0_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Segnochrobactrum spirostomi TaxID=2608987 RepID=A0A6A7Y1Q0_9HYPH)

HSP 1 Score: 280 bits (715), Expect = 1.380e-89
Identity = 134/158 (84.81%), Postives = 149/158 (94.30%), Query Frame = 0

Query:    4 RANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            R N+ E++VSEIAF+VKRTIEDA+G VRVRGEISGYRGPHSSGHAYFSLKDDK+R+EAV+WR  FQRLRF+PEEGMEV+A G+LTTFPGGSKYQIVI++LEPAGVGALMALLE+RR+ LAAEGLFDE RKRPLPFLP VIGVVTSPTGAVIRDILHRL
Sbjct:   17 RPNIGEYTVSEIAFSVKRTIEDAFGHVRVRGEISGYRGPHSSGHAYFSLKDDKSRIEAVIWRGQFQRLRFRPEEGMEVVAVGRLTTFPGGSKYQIVIDSLEPAGVGALMALLEKRRRELAAEGLFDEGRKRPLPFLPTVIGVVTSPTGAVIRDILHRL 174

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A840APH8_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Kaistia hirudinis TaxID=1293440 RepID=A0A840APH8_9HYPH)

HSP 1 Score: 279 bits (713), Expect = 1.490e-89
Identity = 134/161 (83.23%), Postives = 152/161 (94.41%), Query Frame = 0

Query:    1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            TET +N AE+SVSEI+ A+KRT+E+AYG+VRVRGEISGYRGPHSSGHAYF+LKDD+A++EAV+W+ +F RLRF+PEEGMEVIATGKLTTFPG SKYQIVIE LEPAGVGALMALLEERR+ LAAEGLFD ARKRP+P+LPRVIGVVTSPTGAVIRDILHRL
Sbjct:    2 TETASNAAEYSVSEISLALKRTVEEAYGYVRVRGEISGYRGPHSSGHAYFALKDDRAKLEAVIWKGNFGRLRFRPEEGMEVIATGKLTTFPGSSKYQIVIEQLEPAGVGALMALLEERRRRLAAEGLFDPARKRPIPYLPRVIGVVTSPTGAVIRDILHRL 162

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI0015EE3C6F (exodeoxyribonuclease VII large subunit n=1 Tax=Chthonobacter rhizosphaerae TaxID=2735553 RepID=UPI0015EE3C6F)

HSP 1 Score: 276 bits (707), Expect = 5.280e-89
Identity = 132/161 (81.99%), Postives = 152/161 (94.41%), Query Frame = 0

Query:    1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            ++T  NVAE++VSEI+FA+KRT+E+ +G VRVRGEISGYRGPHSSGHAYF+LKDD AR+EAVVWRT+F RLRFKPEEGMEVIATGKLTTFPG SKYQIVIE+LEPAG+GALMALL+ER++ LAAEGLFD ARKRPLPFLP+V+GVVTSPTGAVIRDILHR+
Sbjct:    2 SDTLPNVAEYTVSEISFALKRTVEEQFGHVRVRGEISGYRGPHSSGHAYFALKDDAARLEAVVWRTAFSRLRFKPEEGMEVIATGKLTTFPGSSKYQIVIESLEPAGIGALMALLDERKRKLAAEGLFDPARKRPLPFLPKVVGVVTSPTGAVIRDILHRI 162

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A1M4XQY6_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Kaistia soli DSM 19436 TaxID=1122133 RepID=A0A1M4XQY6_9HYPH)

HSP 1 Score: 277 bits (709), Expect = 6.290e-89
Identity = 135/157 (85.99%), Postives = 148/157 (94.27%), Query Frame = 0

Query:    5 ANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            +NVAE+SVSEI+ A+KRT+ED +G VRVRGEISGYRGPHSSGHAYF+LKDDKA++EAV+WRTS  RLRF+PEEGMEVIA GKLTTFPG SKYQIVIE LEPAGVGALMALLEERRK LAAEGLFD+ARKRPLP+LPRVIGVVTSPTGAVIRDILHRL
Sbjct:    6 SNVAEYSVSEISAALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDKAKLEAVIWRTSMARLRFRPEEGMEVIAVGKLTTFPGSSKYQIVIETLEPAGVGALMALLEERRKKLAAEGLFDQARKRPLPYLPRVIGVVTSPTGAVIRDILHRL 162

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A833G645_9HYPH (Exodeoxyribonuclease VII large subunit (Fragment) n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833G645_9HYPH)

HSP 1 Score: 267 bits (683), Expect = 8.880e-89
Identity = 130/156 (83.33%), Postives = 144/156 (92.31%), Query Frame = 0

Query:    6 NVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            NV EFSVSE++ A+K  +ED +G VRVRGEISG+RGPHSSGH YFSLKDDKAR+EAVVWRT+  RLRFKPEEG+EVIATGKLTTFPG SKYQIVIEALEPAG+GALMALL+ERRK LAAEGLF EARK+PLP+LPRVIGV+TSPTGAVIRDILHRL
Sbjct:    9 NVVEFSVSELSAALKNVVEDRFGHVRVRGEISGFRGPHSSGHCYFSLKDDKARLEAVVWRTTLPRLRFKPEEGIEVIATGKLTTFPGQSKYQIVIEALEPAGIGALMALLDERRKKLAAEGLFAEARKKPLPYLPRVIGVITSPTGAVIRDILHRL 164

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI000FD714E7 (exodeoxyribonuclease VII large subunit n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI000FD714E7)

HSP 1 Score: 263 bits (672), Expect = 1.380e-87
Identity = 122/161 (75.78%), Postives = 150/161 (93.17%), Query Frame = 0

Query:    1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            +E+ +NVAE+SVSE++ ++KRT+E A+  VRVRGEISGYRGPHSSGHAYF+LKDD+AR++AVVW+T+F RL+F+PEEGMEVIATG++TTFPG SKYQIVI++LEPAG GALMAL+EER++ LAAEGLFD  RKRPLPF+PRV+GVVTSPTGAVIRDILHR+
Sbjct:    7 SESPSNVAEYSVSELSGSIKRTVEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRARIDAVVWKTTFARLKFRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALIEERKRKLAAEGLFDAGRKRPLPFMPRVVGVVTSPTGAVIRDILHRI 167

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BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A2C9D2V2_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Hartmannibacter diazotrophicus TaxID=1482074 RepID=A0A2C9D2V2_9HYPH)

HSP 1 Score: 272 bits (695), Expect = 3.560e-87
Identity = 133/156 (85.26%), Postives = 146/156 (93.59%), Query Frame = 0

Query:    6 NVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 161
            N AEF+VSEI+FA+KRT+ED YG VRVRGEISGYRGPHSSGHAYF+LKDDKAR+EAVVWR +  RLRF+PEEGMEVIATGKLTTFPG SKYQIVIEALEPAGVGALMA+LEER+K LAAEGLFD ARK+ LP+LPRVIGVVTSPTGAVIRDILHR+
Sbjct:    6 NAAEFTVSEISFALKRTVEDVYGHVRVRGEISGYRGPHSSGHAYFALKDDKARLEAVVWRPTMGRLRFRPEEGMEVIATGKLTTFPGSSKYQIVIEALEPAGVGALMAMLEERKKRLAAEGLFDPARKQLLPYLPRVIGVVTSPTGAVIRDILHRI 161

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1M7ZM72_9HYPH	1.280e-93	89.24	Exodeoxyribonuclease 7 large subunit n=1 Tax=Pseud...	[more]
UPI00094979A9	8.570e-93	86.96	exodeoxyribonuclease VII large subunit n=1 Tax=Mon...	[more]
UPI000845C9F1	2.420e-90	85.26	exodeoxyribonuclease VII large subunit n=1 Tax=Met...	[more]
A0A6A7Y1Q0_9HYPH	1.380e-89	84.81	Exodeoxyribonuclease 7 large subunit n=1 Tax=Segno...	[more]
A0A840APH8_9HYPH	1.490e-89	83.23	Exodeoxyribonuclease 7 large subunit n=1 Tax=Kaist...	[more]
UPI0015EE3C6F	5.280e-89	81.99	exodeoxyribonuclease VII large subunit n=1 Tax=Cht...	[more]
A0A1M4XQY6_9HYPH	6.290e-89	85.99	Exodeoxyribonuclease 7 large subunit n=1 Tax=Kaist...	[more]
A0A833G645_9HYPH	8.880e-89	83.33	Exodeoxyribonuclease VII large subunit (Fragment) ...	[more]
UPI000FD714E7	1.380e-87	75.78	exodeoxyribonuclease VII large subunit n=1 Tax=Rhi...	[more]
A0A2C9D2V2_9HYPH	3.560e-87	85.26	Exodeoxyribonuclease 7 large subunit n=1 Tax=Hartm...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003753	Exonuclease VII, large subunit	TIGRFAM	TIGR00237	TIGR00237	coord: 11..160 e-value: 1.3E-53 score: 180.5
IPR003753	Exonuclease VII, large subunit	PANTHER	PTHR30008	EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT	coord: 6..161
IPR020579	Exonuclease VII, large subunit, C-terminal	PFAM	PF02601	Exonuc_VII_L	coord: 127..160 e-value: 1.2E-10 score: 41.4
IPR025824	OB-fold nucleic acid binding domain	PFAM	PF13742	tRNA_anti_2	coord: 10..103 e-value: 1.7E-26 score: 92.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig123742	contig	M-pyrifera_M_contig123742:38..520 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig123742.4853.1	mRNA_M-pyrifera_M_contig123742.4853.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig123742 38..520 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig123742.4853.1 ID=prot_M-pyrifera_M_contig123742.4853.1|Name=mRNA_M-pyrifera_M_contig123742.4853.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYF
SLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVI
EALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPT
GAVIRDILHRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003753	Exonuc_VII_L
IPR020579	Exonuc_VII_lsu_C
IPR025824	OB-fold_nuc-bd_dom