mRNA_M-pyrifera_M_contig123742.4853.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A1M7ZM72_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Pseudoxanthobacter soli DSM 19599 TaxID=1123029 RepID=A0A1M7ZM72_9HYPH) HSP 1 Score: 290 bits (742), Expect = 1.280e-93 Identity = 141/158 (89.24%), Postives = 151/158 (95.57%), Query Frame = 1
Query: 10 RANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
R N+ EF+VSEIAF+VKRTIEDAYG VRVRGEISGYRGPHSSGHAYFSLKDDKAR+EAVVWR FQRLRF+PEEGMEV+ATGKLTTFPGGSKYQIVIEALEPAGVGALMALLE+RR+ LAAEGLFDE RK+PLPFLPRV+GVVTSPTGAVIRDILHRL
Sbjct: 13 RGNIGEFTVSEIAFSVKRTIEDAYGHVRVRGEISGYRGPHSSGHAYFSLKDDKARIEAVVWRGVFQRLRFRPEEGMEVVATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEDRRRRLAAEGLFDEVRKKPLPFLPRVVGVVTSPTGAVIRDILHRL 170
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI00094979A9 (exodeoxyribonuclease VII large subunit n=1 Tax=Mongoliimonas terrestris TaxID=1709001 RepID=UPI00094979A9) HSP 1 Score: 286 bits (732), Expect = 8.570e-93 Identity = 140/161 (86.96%), Postives = 153/161 (95.03%), Query Frame = 1
Query: 1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
+ETR NVAE+SVSEI+FA+KRT+E+ +G VRVRGEISGYRGPHSSGHAYF+LKDD AR+EAVVWRT+F RLRFKPEEGMEVIATGKLTTFPG SKYQIVIEALEPAGVGALMALLEER+K LAAEGLFD ARKRPLPFLPRV+GVVTSPTGAVIRDILHR+
Sbjct: 2 SETRPNVAEYSVSEISFALKRTVEEQFGHVRVRGEISGYRGPHSSGHAYFALKDDGARLEAVVWRTAFSRLRFKPEEGMEVIATGKLTTFPGSSKYQIVIEALEPAGVGALMALLEERKKKLAAEGLFDAARKRPLPFLPRVVGVVTSPTGAVIRDILHRI 162
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI000845C9F1 (exodeoxyribonuclease VII large subunit n=1 Tax=Methylobrevis pamukkalensis TaxID=1439726 RepID=UPI000845C9F1) HSP 1 Score: 275 bits (702), Expect = 2.420e-90 Identity = 133/156 (85.26%), Postives = 148/156 (94.87%), Query Frame = 1
Query: 16 NVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
N AEF+VSEI+FA+KRT+EDA+G VRVRGEISGYRGPHSSGHAYF+LKDDKAR+EAVVWR + RLRF+PEEGMEVIATGKLTT+PG SKYQIVIEALEPAGVGALMA+LEER++ LAAEGLFD ARKRPLP+LPRVIGVVTSPTGAVIRDILHR+
Sbjct: 21 NAAEFTVSEISFALKRTVEDAFGNVRVRGEISGYRGPHSSGHAYFALKDDKARIEAVVWRPTMGRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMAMLEERKRRLAAEGLFDPARKRPLPYLPRVIGVVTSPTGAVIRDILHRV 176
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A6A7Y1Q0_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Segnochrobactrum spirostomi TaxID=2608987 RepID=A0A6A7Y1Q0_9HYPH) HSP 1 Score: 280 bits (715), Expect = 1.380e-89 Identity = 134/158 (84.81%), Postives = 149/158 (94.30%), Query Frame = 1
Query: 10 RANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
R N+ E++VSEIAF+VKRTIEDA+G VRVRGEISGYRGPHSSGHAYFSLKDDK+R+EAV+WR FQRLRF+PEEGMEV+A G+LTTFPGGSKYQIVI++LEPAGVGALMALLE+RR+ LAAEGLFDE RKRPLPFLP VIGVVTSPTGAVIRDILHRL
Sbjct: 17 RPNIGEYTVSEIAFSVKRTIEDAFGHVRVRGEISGYRGPHSSGHAYFSLKDDKSRIEAVIWRGQFQRLRFRPEEGMEVVAVGRLTTFPGGSKYQIVIDSLEPAGVGALMALLEKRRRELAAEGLFDEGRKRPLPFLPTVIGVVTSPTGAVIRDILHRL 174
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A840APH8_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Kaistia hirudinis TaxID=1293440 RepID=A0A840APH8_9HYPH) HSP 1 Score: 279 bits (713), Expect = 1.490e-89 Identity = 134/161 (83.23%), Postives = 152/161 (94.41%), Query Frame = 1
Query: 1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
TET +N AE+SVSEI+ A+KRT+E+AYG+VRVRGEISGYRGPHSSGHAYF+LKDD+A++EAV+W+ +F RLRF+PEEGMEVIATGKLTTFPG SKYQIVIE LEPAGVGALMALLEERR+ LAAEGLFD ARKRP+P+LPRVIGVVTSPTGAVIRDILHRL
Sbjct: 2 TETASNAAEYSVSEISLALKRTVEEAYGYVRVRGEISGYRGPHSSGHAYFALKDDRAKLEAVIWKGNFGRLRFRPEEGMEVIATGKLTTFPGSSKYQIVIEQLEPAGVGALMALLEERRRRLAAEGLFDPARKRPIPYLPRVIGVVTSPTGAVIRDILHRL 162
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI0015EE3C6F (exodeoxyribonuclease VII large subunit n=1 Tax=Chthonobacter rhizosphaerae TaxID=2735553 RepID=UPI0015EE3C6F) HSP 1 Score: 276 bits (707), Expect = 5.280e-89 Identity = 132/161 (81.99%), Postives = 152/161 (94.41%), Query Frame = 1
Query: 1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
++T NVAE++VSEI+FA+KRT+E+ +G VRVRGEISGYRGPHSSGHAYF+LKDD AR+EAVVWRT+F RLRFKPEEGMEVIATGKLTTFPG SKYQIVIE+LEPAG+GALMALL+ER++ LAAEGLFD ARKRPLPFLP+V+GVVTSPTGAVIRDILHR+
Sbjct: 2 SDTLPNVAEYTVSEISFALKRTVEEQFGHVRVRGEISGYRGPHSSGHAYFALKDDAARLEAVVWRTAFSRLRFKPEEGMEVIATGKLTTFPGSSKYQIVIESLEPAGIGALMALLDERKRKLAAEGLFDPARKRPLPFLPKVVGVVTSPTGAVIRDILHRI 162
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A1M4XQY6_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Kaistia soli DSM 19436 TaxID=1122133 RepID=A0A1M4XQY6_9HYPH) HSP 1 Score: 277 bits (709), Expect = 6.290e-89 Identity = 135/157 (85.99%), Postives = 148/157 (94.27%), Query Frame = 1
Query: 13 ANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
+NVAE+SVSEI+ A+KRT+ED +G VRVRGEISGYRGPHSSGHAYF+LKDDKA++EAV+WRTS RLRF+PEEGMEVIA GKLTTFPG SKYQIVIE LEPAGVGALMALLEERRK LAAEGLFD+ARKRPLP+LPRVIGVVTSPTGAVIRDILHRL
Sbjct: 6 SNVAEYSVSEISAALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDKAKLEAVIWRTSMARLRFRPEEGMEVIAVGKLTTFPGSSKYQIVIETLEPAGVGALMALLEERRKKLAAEGLFDQARKRPLPYLPRVIGVVTSPTGAVIRDILHRL 162
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A833G645_9HYPH (Exodeoxyribonuclease VII large subunit (Fragment) n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833G645_9HYPH) HSP 1 Score: 267 bits (683), Expect = 8.880e-89 Identity = 130/156 (83.33%), Postives = 144/156 (92.31%), Query Frame = 1
Query: 16 NVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
NV EFSVSE++ A+K +ED +G VRVRGEISG+RGPHSSGH YFSLKDDKAR+EAVVWRT+ RLRFKPEEG+EVIATGKLTTFPG SKYQIVIEALEPAG+GALMALL+ERRK LAAEGLF EARK+PLP+LPRVIGV+TSPTGAVIRDILHRL
Sbjct: 9 NVVEFSVSELSAALKNVVEDRFGHVRVRGEISGFRGPHSSGHCYFSLKDDKARLEAVVWRTTLPRLRFKPEEGIEVIATGKLTTFPGQSKYQIVIEALEPAGIGALMALLDERRKKLAAEGLFAEARKKPLPYLPRVIGVITSPTGAVIRDILHRL 164
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: UPI000FD714E7 (exodeoxyribonuclease VII large subunit n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI000FD714E7) HSP 1 Score: 263 bits (672), Expect = 1.380e-87 Identity = 122/161 (75.78%), Postives = 150/161 (93.17%), Query Frame = 1
Query: 1 TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
+E+ +NVAE+SVSE++ ++KRT+E A+ VRVRGEISGYRGPHSSGHAYF+LKDD+AR++AVVW+T+F RL+F+PEEGMEVIATG++TTFPG SKYQIVI++LEPAG GALMAL+EER++ LAAEGLFD RKRPLPF+PRV+GVVTSPTGAVIRDILHR+
Sbjct: 7 SESPSNVAEYSVSELSGSIKRTVEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRARIDAVVWKTTFARLKFRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALIEERKRKLAAEGLFDAGRKRPLPFMPRVVGVVTSPTGAVIRDILHRI 167
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Match: A0A2C9D2V2_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Hartmannibacter diazotrophicus TaxID=1482074 RepID=A0A2C9D2V2_9HYPH) HSP 1 Score: 272 bits (695), Expect = 3.560e-87 Identity = 133/156 (85.26%), Postives = 146/156 (93.59%), Query Frame = 1
Query: 16 NVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFSLKDDKARVEAVVWRTSFQRLRFKPEEGMEVIATGKLTTFPGGSKYQIVIEALEPAGVGALMALLEERRKALAAEGLFDEARKRPLPFLPRVIGVVTSPTGAVIRDILHRL 483
N AEF+VSEI+FA+KRT+ED YG VRVRGEISGYRGPHSSGHAYF+LKDDKAR+EAVVWR + RLRF+PEEGMEVIATGKLTTFPG SKYQIVIEALEPAGVGALMA+LEER+K LAAEGLFD ARK+ LP+LPRVIGVVTSPTGAVIRDILHR+
Sbjct: 6 NAAEFTVSEISFALKRTVEDVYGHVRVRGEISGYRGPHSSGHAYFALKDDKARLEAVVWRPTMGRLRFRPEEGMEVIATGKLTTFPGSSKYQIVIEALEPAGVGALMAMLEERKKRLAAEGLFDPARKQLLPYLPRVIGVVTSPTGAVIRDILHRI 161 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123742.4853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123742.4853.1 >prot_M-pyrifera_M_contig123742.4853.1 ID=prot_M-pyrifera_M_contig123742.4853.1|Name=mRNA_M-pyrifera_M_contig123742.4853.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp TETRANVAEFSVSEIAFAVKRTIEDAYGFVRVRGEISGYRGPHSSGHAYFback to top mRNA from alignment at M-pyrifera_M_contig123742:38..520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123742.4853.1 ID=mRNA_M-pyrifera_M_contig123742.4853.1|Name=mRNA_M-pyrifera_M_contig123742.4853.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=483bp|location=Sequence derived from alignment at M-pyrifera_M_contig123742:38..520+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123742:38..520+ >mRNA_M-pyrifera_M_contig123742.4853.1 ID=mRNA_M-pyrifera_M_contig123742.4853.1|Name=mRNA_M-pyrifera_M_contig123742.4853.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig123742:38..520+ (Macrocystis pyrifera P11B4 male)back to top |