mRNA_M-pyrifera_M_contig12366.4846.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.610e-106 Identity = 184/337 (54.60%), Postives = 223/337 (66.17%), Query Frame = 1
Query: 1 MTSLDFQSLLKQEKALLRQAERAKQSATSATSVNRNGHPLSSTKGSLAENCTLEEPVNSERCPLRREPSPSFEELANRPSLDPWKMRVGTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARG----------------APVVNADAAGSPEGTVVQRQLRVSLTFRKVKV--RSGETG 957
MTSLDFQSLLKQEKAL R + A+ + T+A E + +EPSP +LA RPSLD KMRVG TP+I YVPDFIS +E++LL R ++ A+S + WVTL SRRLKCWGGQPGE F PEPLP W++ALC++LV R VF++E RPNHVLLNEY+PGQGIM HTDGPFY PRTATLS+GS+AVMHFSPR+ + IGR GV+ +P +SLVL+ LVVFAD+AYSRLLH IDAV EETVG G APV+N AAG+PEGT+++R+LRVSLTFR+V+ R ETG
Sbjct: 1 MTSLDFQSLLKQEKALQR-VQLAQSTRTTAVQXXXXXXXXXXXXXXXXXXXXXXE----SKVVGTKEPSPLLVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAQASS----------------NEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRAADRGEETG 316
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA) HSP 1 Score: 182 bits (463), Expect = 8.970e-53 Identity = 112/249 (44.98%), Postives = 143/249 (57.43%), Query Frame = 1
Query: 235 PSLDPWKMRVGTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQ---PGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAA-ADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGA---PVVNADAAG-SPEGTVVQRQLRVSLTFRKVK--VRSGE 951
P++D R GT P++ Y PDF++ + +E++ + Y A E G W L +RRL+CWGGQ G +P L WL+ LC LV +F PNHVL+NEY+PGQGIMPHTDGP Y PRTATLS+ S+AV + R + DIG VD P +L+L+ R LVVFAD AY+ HGID V EE VG VVN AG + E VV+R LR+SLTFR V R+G+
Sbjct: 6 PTVDLQSHRTGTIPSVYYNPDFVTASLADEIIKQVY---------AVPE------GHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGDGSGGTCSVVNGPEAGVAEEEVVVERALRISLTFRHVPDAARTGQ 237
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.050e-52 Identity = 91/177 (51.41%), Postives = 120/177 (67.80%), Query Frame = 1
Query: 412 WVTLSSRRLKCWGGQPGEG--FEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQ-LRVSLTFRKV 933
W++LS RR++CWGGQP E F PEPLP WL +C ALV VF E RPNHVL+NEY G+GI+PH+DGP Y P+TATLS+G A+M F PR+++ DIG V + P+ ++L+ R LVVF D AY +H I + + VG+R P+ N +G+ G +VQR +RVSLTFR V
Sbjct: 16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGSRAVPI-NLALSGARHGEMVQRPAIRVSLTFRHV 189
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA) HSP 1 Score: 189 bits (480), Expect = 2.200e-52 Identity = 109/244 (44.67%), Postives = 148/244 (60.66%), Query Frame = 1
Query: 208 PSFEELANRPSLDPWKMRVGTT-PTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQ-LRVSLTFRKV 933
P F+ +RP + V + T+ Y+P++++E EE ++A+TY+ S P+ WVTL RRL+CWGG+P EPLP WL+ L + LV +F E PNHVLLNEYK G+GIM HTDG FY P+TATLS+G AVM F+PRV +G VD +P++ +VL+ R LVVF +EAY LH I A + VGA APV N ++AG+ G V+ R +R+SLTFR +
Sbjct: 77 PPFDRWTSRPRVKLTDYDVDSKLKTVSYLPEWVAEDEEAAIMAQTYAVPDSHPS---------------WVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA-APVANLESAGARLGEVIARPAVRLSLTFRHI 302
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.020e-41 Identity = 96/242 (39.67%), Postives = 132/242 (54.55%), Query Frame = 1
Query: 265 GTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPGEG---FEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGA--PVVNADAAGSPEGTV-----VQRQLRVSLTFRKVKVRSGETGD 960
G + YVP++IS+ E+E++ +S + WV L RRL+C+GG+P E F+ E LP W+ +C L+ VF +E PNHVLLNEY+PGQGIM H DGPFY R A +S+G A+ F R+ A +I ++ P ++VL+ R L+VF EAY LH I AV EE VG PV+N + EG + ++R LR+SLT R+VK GE D
Sbjct: 129 GPPDGVFYVPEYISKEMEQEIMEVAHSMPV-----------------NQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLERL---EGRINVGDRLKRALRLSLTCRRVK-EEGEVKD 349
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: UPI00074FE481 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE481) HSP 1 Score: 154 bits (388), Expect = 1.230e-41 Identity = 102/241 (42.32%), Postives = 131/241 (54.36%), Query Frame = 1
Query: 238 SLDPWKMRVGTTP-TILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADI--GRQGV-----DAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQLRVSLTFRKV 933
+L+P+ RVG P T Y+PDFI+E EE LL + Y GA W LS RRL+ WGG P +G PE LP WL+A D + VF + NHVL+NEY+PG+GIMPH DGP Y P T+++GS ++ F V G QG + + L SL+LK R L+V ++ Y R LHGI VTE+TV + V N DA GS G ++R RVSLT R V
Sbjct: 10 ALEPF--RVGQCPPTACYIPDFITEAEEAYLLQQVY-----------------GAPKPKWTQLSGRRLQNWGGLPHPKGMVPEKLPTWLQAYTDKVSSLGVFGGKSA-NHVLVNEYRPGEGIMPHEDGPLYFPTVTTINLGSHVLLDFYHPVGRGQQTEGEQGPAPQSEEDRHLLSLLLKSRSLLVLREDMYLRYLHGIRFVTEDTVTEK---VANLDACGSELGDTLRRGTRVSLTIRHV 227
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: UPI0018F7746E (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 n=2 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F7746E) HSP 1 Score: 153 bits (387), Expect = 1.780e-41 Identity = 101/245 (41.22%), Postives = 134/245 (54.69%), Query Frame = 1
Query: 235 PSLDPWKMRVGTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGR-PNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAA---------DIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPE-GTVVQRQLRVSLTFRKV 933
P+L+P++++ PTI Y+PDF+SE EEE LL + Y+ A W LS R+L+ WGG P G PE LP WL+ + + VF GR NHVL+NEY+PGQGIMPH DGP Y PR +T+S+GS ++ +A G Q + LSSL+L+RR L+V A AY+RLLHGI VT +T+ PV N + S + G + R RVSLT R V
Sbjct: 9 PALEPFRVKQAP-PTIYYMPDFVSEEEEEYLLRQVYN-----------------APKPKWTQLSGRKLQNWGGLPHPRGMVPEQLPAWLQRYTEKISSLGVFG--GRHANHVLINEYQPGQGIMPHEDGPLYYPRVSTISLGSHTLLDLYRPFRSALGPEAEEEEQKGPQTEQQRHLSSLLLERRSLLVLAGTAYTRLLHGIRPVTADTLT---GPVANLPSCPSAQPGATLPRGTRVSLTVRHV 230
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO) HSP 1 Score: 154 bits (390), Expect = 4.550e-41 Identity = 91/188 (48.40%), Postives = 114/188 (60.64%), Query Frame = 1
Query: 412 WVTLSSRRLKCWGGQPGEG---FEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQG---VDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQ-LRVSLTFRKVKVRSGET 954
WV L RRL +GG P G EPLP WL A+ D LV F ++ RPNHVL+N Y PG+GI+PHTDGP Y P TATLS+GS+AVM F+PRV + +G ++A L RR LVVF+DEAY+ LH + AV E V A+ +NA + G EG+++ R LRVSLT R V G T
Sbjct: 128 WVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRVTAK---CLNAASLGWAEGSLIPRAPLRVSLTMRHVPAVKGAT 312
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A665W4V9_ECHNA (AlkB homolog 6 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665W4V9_ECHNA) HSP 1 Score: 151 bits (382), Expect = 6.090e-41 Identity = 89/225 (39.56%), Postives = 122/225 (54.22%), Query Frame = 1
Query: 265 GTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHF-SPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQLRVSLTFRKV 933
G PT+ Y+PDFISE EE LL + Y + + W LS RRL+ WGG P +G E +P WL+ C+ + F+ + + NHVL+NEYKPG+GIMPH DGP Y P T+S+GS ++ F +P Q + + L SL++K R L++ DE Y LLHGI T++T+ + VVN AG+ G + R RVSLT R V
Sbjct: 9 GALPTVYYIPDFISEDEESYLLQQVYKSPKTK-----------------WTQLSGRRLQNWGGLPHPKGMLVEKIPDWLQTYCEKISSLGAFSGK-KANHVLMNEYKPGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYTPVNTLEGDAPQTEENRYLFSLLVKPRSLLILQDEMYQHLLHGIRPCTQDTLTDK---VVNLSTAGALSGETLTRSTRVSLTVRHV 212
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A667ZZL8_9TELE (AlkB homolog 6 n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZZL8_9TELE) HSP 1 Score: 151 bits (381), Expect = 1.110e-40 Identity = 90/222 (40.54%), Postives = 122/222 (54.95%), Query Frame = 1
Query: 274 PTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHF-SPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQLRVSLTFRKV 933
PT+ Y+PDFISE EE LL + Y + + W LS RRL+ WGG P +G E +P WLE C+ + F+ + NHVL+NEYK G+GIMPH DGP Y P T+S+GS ++ F P + G Q +++ L SL+LK R L++ DE Y LLHGI +++T+ R VVN +AG+ G + R RVSLT R V
Sbjct: 21 PTVFYIPDFISEEEEAYLLQQVYQSPRTK-----------------WTQLSGRRLQNWGGLPHPKGMLAEKIPDWLEKYCERISSLGAFSGK-TANHVLVNEYKQGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYRPISSQGAAGPQTEESRYLLSLLLKPRSLLILQDEMYQHLLHGIQPCSQDTLTDR---VVNLSSAGALPGETLPRGTRVSLTIRHV 221 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12366.4846.1 >prot_M-pyrifera_M_contig12366.4846.1 ID=prot_M-pyrifera_M_contig12366.4846.1|Name=mRNA_M-pyrifera_M_contig12366.4846.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=322bp MTSLDFQSLLKQEKALLRQAERAKQSATSATSVNRNGHPLSSTKGSLAENback to top mRNA from alignment at M-pyrifera_M_contig12366:6457..9025- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12366.4846.1 ID=mRNA_M-pyrifera_M_contig12366.4846.1|Name=mRNA_M-pyrifera_M_contig12366.4846.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2569bp|location=Sequence derived from alignment at M-pyrifera_M_contig12366:6457..9025- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12366:6457..9025- >mRNA_M-pyrifera_M_contig12366.4846.1 ID=mRNA_M-pyrifera_M_contig12366.4846.1|Name=mRNA_M-pyrifera_M_contig12366.4846.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1932bp|location=Sequence derived from alignment at M-pyrifera_M_contig12366:6457..9025- (Macrocystis pyrifera P11B4 male)back to top |