mRNA_M-pyrifera_M_contig12366.4846.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12366.4846.1
Unique NamemRNA_M-pyrifera_M_contig12366.4846.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.610e-106
Identity = 184/337 (54.60%), Postives = 223/337 (66.17%), Query Frame = 1
Query:    1 MTSLDFQSLLKQEKALLRQAERAKQSATSATSVNRNGHPLSSTKGSLAENCTLEEPVNSERCPLRREPSPSFEELANRPSLDPWKMRVGTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARG----------------APVVNADAAGSPEGTVVQRQLRVSLTFRKVKV--RSGETG 957
            MTSLDFQSLLKQEKAL R  + A+ + T+A                        E     +    +EPSP   +LA RPSLD  KMRVG TP+I YVPDFIS  +E++LL R ++ A+S                + WVTL SRRLKCWGGQPGE F PEPLP W++ALC++LV R VF++E RPNHVLLNEY+PGQGIM HTDGPFY PRTATLS+GS+AVMHFSPR+  + IGR GV+ +P +SLVL+   LVVFAD+AYSRLLH IDAV EETVG  G                APV+N  AAG+PEGT+++R+LRVSLTFR+V+   R  ETG
Sbjct:    1 MTSLDFQSLLKQEKALQR-VQLAQSTRTTAVQXXXXXXXXXXXXXXXXXXXXXXE----SKVVGTKEPSPLLVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAQASS----------------NEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRAADRGEETG 316          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA)

HSP 1 Score: 182 bits (463), Expect = 8.970e-53
Identity = 112/249 (44.98%), Postives = 143/249 (57.43%), Query Frame = 1
Query:  235 PSLDPWKMRVGTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQ---PGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAA-ADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGA---PVVNADAAG-SPEGTVVQRQLRVSLTFRKVK--VRSGE 951
            P++D    R GT P++ Y PDF++ +  +E++ + Y         A  E      G   W  L +RRL+CWGGQ    G   +P  L  WL+ LC  LV   +F     PNHVL+NEY+PGQGIMPHTDGP Y PRTATLS+ S+AV   + R  +  DIG   VD  P  +L+L+ R LVVFAD AY+   HGID V EE VG        VVN   AG + E  VV+R LR+SLTFR V    R+G+
Sbjct:    6 PTVDLQSHRTGTIPSVYYNPDFVTASLADEIIKQVY---------AVPE------GHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGDGSGGTCSVVNGPEAGVAEEEVVVERALRISLTFRHVPDAARTGQ 237          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.050e-52
Identity = 91/177 (51.41%), Postives = 120/177 (67.80%), Query Frame = 1
Query:  412 WVTLSSRRLKCWGGQPGEG--FEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQ-LRVSLTFRKV 933
            W++LS RR++CWGGQP E   F PEPLP WL  +C ALV   VF  E RPNHVL+NEY  G+GI+PH+DGP Y P+TATLS+G  A+M F PR+++ DIG   V + P+  ++L+ R LVVF D AY   +H I +   + VG+R  P+ N   +G+  G +VQR  +RVSLTFR V
Sbjct:   16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGSRAVPI-NLALSGARHGEMVQRPAIRVSLTFRHV 189          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.200e-52
Identity = 109/244 (44.67%), Postives = 148/244 (60.66%), Query Frame = 1
Query:  208 PSFEELANRPSLDPWKMRVGTT-PTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQ-LRVSLTFRKV 933
            P F+   +RP +      V +   T+ Y+P++++E EE  ++A+TY+   S P+               WVTL  RRL+CWGG+P      EPLP WL+ L + LV   +F  E  PNHVLLNEYK G+GIM HTDG FY P+TATLS+G  AVM F+PRV    +G   VD +P++ +VL+ R LVVF +EAY   LH I A   + VGA  APV N ++AG+  G V+ R  +R+SLTFR +
Sbjct:   77 PPFDRWTSRPRVKLTDYDVDSKLKTVSYLPEWVAEDEEAAIMAQTYAVPDSHPS---------------WVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA-APVANLESAGARLGEVIARPAVRLSLTFRHI 302          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.020e-41
Identity = 96/242 (39.67%), Postives = 132/242 (54.55%), Query Frame = 1
Query:  265 GTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPGEG---FEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGA--PVVNADAAGSPEGTV-----VQRQLRVSLTFRKVKVRSGETGD 960
            G    + YVP++IS+  E+E++   +S                    + WV L  RRL+C+GG+P E    F+ E LP W+  +C  L+   VF +E  PNHVLLNEY+PGQGIM H DGPFY  R A +S+G  A+  F  R+ A +I     ++ P  ++VL+ R L+VF  EAY   LH I AV EE VG      PV+N +     EG +     ++R LR+SLT R+VK   GE  D
Sbjct:  129 GPPDGVFYVPEYISKEMEQEIMEVAHSMPV-----------------NQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLERL---EGRINVGDRLKRALRLSLTCRRVK-EEGEVKD 349          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: UPI00074FE481 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE481)

HSP 1 Score: 154 bits (388), Expect = 1.230e-41
Identity = 102/241 (42.32%), Postives = 131/241 (54.36%), Query Frame = 1
Query:  238 SLDPWKMRVGTTP-TILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADI--GRQGV-----DAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQLRVSLTFRKV 933
            +L+P+  RVG  P T  Y+PDFI+E EE  LL + Y                 GA    W  LS RRL+ WGG P  +G  PE LP WL+A  D +    VF  +   NHVL+NEY+PG+GIMPH DGP Y P   T+++GS  ++ F   V       G QG      + + L SL+LK R L+V  ++ Y R LHGI  VTE+TV  +   V N DA GS  G  ++R  RVSLT R V
Sbjct:   10 ALEPF--RVGQCPPTACYIPDFITEAEEAYLLQQVY-----------------GAPKPKWTQLSGRRLQNWGGLPHPKGMVPEKLPTWLQAYTDKVSSLGVFGGKSA-NHVLVNEYRPGEGIMPHEDGPLYFPTVTTINLGSHVLLDFYHPVGRGQQTEGEQGPAPQSEEDRHLLSLLLKSRSLLVLREDMYLRYLHGIRFVTEDTVTEK---VANLDACGSELGDTLRRGTRVSLTIRHV 227          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: UPI0018F7746E (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 n=2 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F7746E)

HSP 1 Score: 153 bits (387), Expect = 1.780e-41
Identity = 101/245 (41.22%), Postives = 134/245 (54.69%), Query Frame = 1
Query:  235 PSLDPWKMRVGTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGR-PNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAA---------DIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPE-GTVVQRQLRVSLTFRKV 933
            P+L+P++++    PTI Y+PDF+SE EEE LL + Y+                 A    W  LS R+L+ WGG P   G  PE LP WL+   + +    VF   GR  NHVL+NEY+PGQGIMPH DGP Y PR +T+S+GS  ++       +A           G Q    + LSSL+L+RR L+V A  AY+RLLHGI  VT +T+     PV N  +  S + G  + R  RVSLT R V
Sbjct:    9 PALEPFRVKQAP-PTIYYMPDFVSEEEEEYLLRQVYN-----------------APKPKWTQLSGRKLQNWGGLPHPRGMVPEQLPAWLQRYTEKISSLGVFG--GRHANHVLINEYQPGQGIMPHEDGPLYYPRVSTISLGSHTLLDLYRPFRSALGPEAEEEEQKGPQTEQQRHLSSLLLERRSLLVLAGTAYTRLLHGIRPVTADTLT---GPVANLPSCPSAQPGATLPRGTRVSLTVRHV 230          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO)

HSP 1 Score: 154 bits (390), Expect = 4.550e-41
Identity = 91/188 (48.40%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  412 WVTLSSRRLKCWGGQPGEG---FEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQG---VDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQ-LRVSLTFRKVKVRSGET 954
            WV L  RRL  +GG P  G      EPLP WL A+ D LV    F ++ RPNHVL+N Y PG+GI+PHTDGP Y P TATLS+GS+AVM F+PRV +  +G      ++A       L RR LVVF+DEAY+  LH + AV E  V A+    +NA + G  EG+++ R  LRVSLT R V    G T
Sbjct:  128 WVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRVTAK---CLNAASLGWAEGSLIPRAPLRVSLTMRHVPAVKGAT 312          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A665W4V9_ECHNA (AlkB homolog 6 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665W4V9_ECHNA)

HSP 1 Score: 151 bits (382), Expect = 6.090e-41
Identity = 89/225 (39.56%), Postives = 122/225 (54.22%), Query Frame = 1
Query:  265 GTTPTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHF-SPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQLRVSLTFRKV 933
            G  PT+ Y+PDFISE EE  LL + Y +  +                  W  LS RRL+ WGG P  +G   E +P WL+  C+ +     F+ + + NHVL+NEYKPG+GIMPH DGP Y P   T+S+GS  ++ F +P         Q  + + L SL++K R L++  DE Y  LLHGI   T++T+  +   VVN   AG+  G  + R  RVSLT R V
Sbjct:    9 GALPTVYYIPDFISEDEESYLLQQVYKSPKTK-----------------WTQLSGRRLQNWGGLPHPKGMLVEKIPDWLQTYCEKISSLGAFSGK-KANHVLMNEYKPGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYTPVNTLEGDAPQTEENRYLFSLLVKPRSLLILQDEMYQHLLHGIRPCTQDTLTDK---VVNLSTAGALSGETLTRSTRVSLTVRHV 212          
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Match: A0A667ZZL8_9TELE (AlkB homolog 6 n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZZL8_9TELE)

HSP 1 Score: 151 bits (381), Expect = 1.110e-40
Identity = 90/222 (40.54%), Postives = 122/222 (54.95%), Query Frame = 1
Query:  274 PTILYVPDFISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWGGQPG-EGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIMPHTDGPFYAPRTATLSVGSEAVMHF-SPRVAAADIGRQGVDAKPLSSLVLKRRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQRQLRVSLTFRKV 933
            PT+ Y+PDFISE EE  LL + Y +  +                  W  LS RRL+ WGG P  +G   E +P WLE  C+ +     F+ +   NHVL+NEYK G+GIMPH DGP Y P   T+S+GS  ++ F  P  +    G Q  +++ L SL+LK R L++  DE Y  LLHGI   +++T+  R   VVN  +AG+  G  + R  RVSLT R V
Sbjct:   21 PTVFYIPDFISEEEEAYLLQQVYQSPRTK-----------------WTQLSGRRLQNWGGLPHPKGMLAEKIPDWLEKYCERISSLGAFSGK-TANHVLVNEYKQGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYRPISSQGAAGPQTEESRYLLSLLLKPRSLLILQDEMYQHLLHGIQPCSQDTLTDR---VVNLSSAGALPGETLPRGTRVSLTIRHV 221          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12366.4846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG9_ECTSI1.610e-10654.60Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835ZDT2_9STRA8.970e-5344.98Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2G3H8_9STRA2.050e-5251.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2G6U9_9STRA2.200e-5244.67Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A4D9DGD1_9STRA1.020e-4139.67Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
UPI00074FE4811.230e-4142.32alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
UPI0018F7746E1.780e-4141.22alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
A0A7S0PB53_CAFRO4.550e-4148.40Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
A0A665W4V9_ECHNA6.090e-4139.56AlkB homolog 6 n=1 Tax=Echeneis naucrates TaxID=17... [more]
A0A667ZZL8_9TELE1.110e-4040.54AlkB homolog 6 n=2 Tax=Myripristis murdjan TaxID=5... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12366contigM-pyrifera_M_contig12366:6457..9025 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue2.6e-87
Seed eggNOG ortholog2880.D7FNG9
KEGG koko:K10768
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ferrous iron binding
EggNOG OGsKOG3200@1,KOG3200@2759
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-01_005500.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons4
Model size966
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12366.4846.1prot_M-pyrifera_M_contig12366.4846.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12366 6457..9025 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815755.2138226-CDS-M-pyrifera_M_contig12366:6456..68481622815755.2138226-CDS-M-pyrifera_M_contig12366:6456..6848Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 6457..6848 -
1692277554.1394744-CDS-M-pyrifera_M_contig12366:6456..68481692277554.1394744-CDS-M-pyrifera_M_contig12366:6456..6848Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 6457..6848 -
1622815755.224441-CDS-M-pyrifera_M_contig12366:7485..78041622815755.224441-CDS-M-pyrifera_M_contig12366:7485..7804Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 7486..7804 -
1692277554.1518912-CDS-M-pyrifera_M_contig12366:7485..78041692277554.1518912-CDS-M-pyrifera_M_contig12366:7485..7804Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 7486..7804 -
1622815755.2398071-CDS-M-pyrifera_M_contig12366:8659..88201622815755.2398071-CDS-M-pyrifera_M_contig12366:8659..8820Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 8660..8820 -
1692277554.1605022-CDS-M-pyrifera_M_contig12366:8659..88201692277554.1605022-CDS-M-pyrifera_M_contig12366:8659..8820Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 8660..8820 -
1622815755.2522597-CDS-M-pyrifera_M_contig12366:8931..90251622815755.2522597-CDS-M-pyrifera_M_contig12366:8931..9025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 8932..9025 -
1692277554.1740406-CDS-M-pyrifera_M_contig12366:8931..90251692277554.1740406-CDS-M-pyrifera_M_contig12366:8931..9025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12366 8932..9025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12366.4846.1

>prot_M-pyrifera_M_contig12366.4846.1 ID=prot_M-pyrifera_M_contig12366.4846.1|Name=mRNA_M-pyrifera_M_contig12366.4846.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=322bp
MTSLDFQSLLKQEKALLRQAERAKQSATSATSVNRNGHPLSSTKGSLAEN
CTLEEPVNSERCPLRREPSPSFEELANRPSLDPWKMRVGTTPTILYVPDF
ISETEEEELLARTYSNAASAPTAATTETQQSGAGADTWVTLSSRRLKCWG
GQPGEGFEPEPLPGWLEALCDALVRRKVFTQEGRPNHVLLNEYKPGQGIM
PHTDGPFYAPRTATLSVGSEAVMHFSPRVAAADIGRQGVDAKPLSSLVLK
RRCLVVFADEAYSRLLHGIDAVTEETVGARGAPVVNADAAGSPEGTVVQR
QLRVSLTFRKVKVRSGETGDL*
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mRNA from alignment at M-pyrifera_M_contig12366:6457..9025-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12366.4846.1 ID=mRNA_M-pyrifera_M_contig12366.4846.1|Name=mRNA_M-pyrifera_M_contig12366.4846.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2569bp|location=Sequence derived from alignment at M-pyrifera_M_contig12366:6457..9025- (Macrocystis pyrifera P11B4 male)
ATGACGAGCCTCGACTTTCAAAGTTTGCTGAAGCAAGAAAAGGCACTGCT GCGTCAGGCCGAGCGAGCAAAGCAAAGTGCCACAAGTGCTACGAGTGCCA CGAGTGCTATGAGTACCAGGGCTGACAATGCGGCGCAACCTGAAGCAAGC TTGAAAATCAGACTCCAAAACGACCAAAATGCCGATGGATCTGTCTCCGA CGCAGGCGTGAACAGAAATGGTCATCCGTTGTCGTCGACGAAGGGCAGCC TCGCCGAGAATTGTACATTGGAGGAGCCGGTGAATTCCGAGAGGTGTCCG CTGCGAAGGGAGCCGTCGCCGAGCTTTGAAGAACTAGCGAACCGACCGTC GCTGGACCCATGGAAGGTATCACAGCACGAGCACGTACTGAAGTACTGCT GAACGTGCATCAGTACAGCGGAAGTATCATACTCGTGGCAGCAGCGCTCG AGCACTGAGCACCGTACTTTGTACTCGTAGTCTTTGTTGACTGCTGCTGC TGCAGCCCACCCTTGTACTCGAGCTGTACCGGTACACATTCACCCTATCC TGCAGGTAGCTGAGCAAGGTGTACGGTGTGCTGTGTCTCGCATCAGATGT GCTGGCAAAGTTTCGAAACAAACTTCTGCCCCCAAGTCCATCCGGCCACG CACTAATCCAGGTACCTGGTACACATTTTGCTGTATTATTAATATAAAAT GCAAGTCTGTCCTCGCTGAACGCTGACTCTTGTTGGCATGCTTGCTCGAG ATATGTTATTATCGTGTTCCGCTCCGTGTGCGAGGCACGCGTCGCCGCCT GAACGGAAAGAAAATGCTCCATAGAGCAGGCTGTTCCGAGCTTGCATGAC ATGAGATGTTTCCATTCTGACGGTGCCGCTTGCCTTCCACAAGGAGAGGA ACAAGCAGAGAGAACGTCTTGTCTTGTTCATGGAGTCGGTCAGGGTGCCA CACTACGGATAAAATCGTCCTGTTGACACTCGGGTGCTATCACCCAAGAG AGTCGCCGACCTGTACATCCTTTCACGAGGTTCATGCATATACTGTAGCC TCACGCGCGACCGAAGCATCACACGCAGCTTTAGAAATGATCAACTTCAT CAACTCACAGCTGTCGTTTTGTTTTATTTAGCTGGTATAAATAGTAAACA AAAAATCCCTTCCCTCCACGACGTCCCGCCACCCAACGCTAATCGTAATG TATTCAAATAACTTCCCGCAGATGCGAGTCGGCACCACCCCCACAATTTT ATACGTCCCGGACTTCATCTCAGAGACGGAAGAGGAAGAACTTTTGGCGA GAACTTACTCAAACGCAGCGTCGGCGCCGACGGCGGCGACGACAGAGACA CAGCAGTCAGGCGCGGGCGCGGATACATGGGTGACGCTGAGTTCGAGGAG GTTGAAGTGCTGGGGCGGTCAACCCGGAGAAGGGTTCGAACCCGAGCCGC TGCCGGGGTGGTTGGAGGCGTTGTGCGACGCCCTGGTGCGGAGGAAAGTG TTCACCCAGGAGGGCAGACCCAACCACGTTTTGCTCAACGGTGAGGAACA AACAGTAGACCAAGCAGTAGGTCAAGCATTAGTAAAACCAGTAGGGGTAG AGAAATAATATACATACATGCATAGATAAGGTGAGTTTATATAGCTGTGC TCTGGCCGAAGGGCGTCATCCTCCATAGATTTCGAAAACAAATTGAATAC CAGGTACCCGGTACGCTACAATTTATCACTTTTTTGGTCGACTTGGTGAG CGTGCTCCTGTAAGCTTCCCCGTCGAGTGTTACCGTGCCGGAGTGGTGGT AGTGTGTTGGGTTCAGTAGTACGAGCTTTTGTAAACTTGAAAAGCGATTT AACAGTAAGAGCTCAGCTCCGCCAAAGCCGCGGAAGGGTGGGAAAATCCT TAACGTGACCCGACCCCGCCGAAGCCGATCGATTTCGTTGACCATGGAAG CAATGTCGGACCTCTCACAATGACGAAAACATCGTAAGCACATAGCGTAC TATACATGAGCGCATAACGTCCCTCTCCACCTGAAACATCGTATGTGTAT GCAGTATTATCCCAACTCGCCGCCTCAATTCAATTCAAACAGCTAACGCT ACCACCCCATTTCTCCTGCTGGTGCCGCCCCCCCCTGTTATGCCCCCGCC AACGCCCCCCGATCGTATTATCTCCAGAATACAAACCTGGCCAAGGCATA ATGCCGCACACGGACGGGCCGTTCTACGCGCCGCGCACCGCCACCCTCAG CGTTGGCAGCGAGGCAGTCATGCACTTCTCCCCGCGCGTCGCGGCCGCGG ATATCGGTCGACAGGGGGTAGACGCCAAACCGCTGTCGTCTCTAGTGCTG AAGAGACGGTGCCTCGTAGTGTTCGCCGACGAAGCGTACTCTCGCTTATT GCACGGCATAGACGCGGTGACGGAGGAGACCGTCGGCGCACGCGGAGCCC CCGTCGTCAACGCCGATGCAGCCGGCTCGCCGGAGGGTACGGTTGTGCAG CGACAGCTGAGGGTGTCGCTCACGTTCAGAAAGGTCAAGGTTCGCTCTGG TGAAACCGGCGACTTGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12366:6457..9025-

>mRNA_M-pyrifera_M_contig12366.4846.1 ID=mRNA_M-pyrifera_M_contig12366.4846.1|Name=mRNA_M-pyrifera_M_contig12366.4846.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1932bp|location=Sequence derived from alignment at M-pyrifera_M_contig12366:6457..9025- (Macrocystis pyrifera P11B4 male)
ATGACGAGCCTCGACTTTCAAAGTTTGCTGAAGCAAGAAAAGGCACTGCT
GCGTCAGGCCGAGCGAGCAAAGCAAAGTGCCACAAGTGCTACGAATGACG
AGCCTCGACTTTCAAAGTTTGCTGAAGCAAGAAAAGGCACTGCTGCGTCA
GGCCGAGCGAGCAAAGCAAAGTGCCACAAGTGCTACGAGCGTGAACAGAA
ATGGTCATCCGTTGTCGTCGACGAAGGGCAGCCTCGCCGAGAATTGTACA
TTGGAGGAGCCGGTGAATTCCGAGAGGTGTCCGCTGCGAAGGGAGCCGTC
GCCGAGCTTTGAAGAACTAGCGAACCGACCGTCGCTGGACCCATGGAAGG
CGTGAACAGAAATGGTCATCCGTTGTCGTCGACGAAGGGCAGCCTCGCCG
AGAATTGTACATTGGAGGAGCCGGTGAATTCCGAGAGGTGTCCGCTGCGA
AGGGAGCCGTCGCCGAGCTTTGAAGAACTAGCGAACCGACCGTCGCTGGA
CCCATGGAAGATGCGAGTCGGCACCACCCCCACAATTTTATACGTCCCGG
ACTTCATCTCAGAGACGGAAGAGGAAGAACTTTTGGCGAGAACTTACTCA
AACGCAGCGTCGGCGCCGACGGCGGCGACGACAGAGACACAGCAGTCAGG
CGCGGGCGCGGATACATGGGTGACGCTGAGTTCGAGGAGGTTGAAGTGCT
GGGGCGGTCAACCCGGAGAAGGGTTCGAACCCGAGCCGCTGCCGGGGTGG
TTGGAGGCGTTGTGCGACGCCCTGGTGCGGAGGAAAGTGTTCACCCAGGA
GGGCAGACCCAACCACGTTTTGCTCAACGATGCGAGTCGGCACCACCCCC
ACAATTTTATACGTCCCGGACTTCATCTCAGAGACGGAAGAGGAAGAACT
TTTGGCGAGAACTTACTCAAACGCAGCGTCGGCGCCGACGGCGGCGACGA
CAGAGACACAGCAGTCAGGCGCGGGCGCGGATACATGGGTGACGCTGAGT
TCGAGGAGGTTGAAGTGCTGGGGCGGTCAACCCGGAGAAGGGTTCGAACC
CGAGCCGCTGCCGGGGTGGTTGGAGGCGTTGTGCGACGCCCTGGTGCGGA
GGAAAGTGTTCACCCAGGAGGGCAGACCCAACCACGTTTTGCTCAACGAA
TACAAACCTGGCCAAGGCATAATGCCGCACACGGACGGGCCGTTCTACGC
GCCGCGCACCGCCACCCTCAGCGTTGGCAGCGAGGCAGTCATGCACTTCT
CCCCGCGCGTCGCGGCCGCGGATATCGGTCGACAGGGGGTAGACGCCAAA
CCGCTGTCGTCTCTAGTGCTGAAGAGACGGTGCCTCGTAGTGTTCGCCGA
CGAAGCGTACTCTCGCTTATTGCACGGCATAGACGCGGTGACGGAGGAGA
CCGTCGGCGCACGCGGAGCCCCCGTCGTCAACGCCGATGCAGCCGGCTCG
CCGGAGGGTACGGTTGTGCAGCGACAGCTGAGGGTGTCGCTCACGTTCAG
AAAGGTCAAGGTTCGCTCTGGTGAAACCGGCGACTTGTGAAATACAAACC
TGGCCAAGGCATAATGCCGCACACGGACGGGCCGTTCTACGCGCCGCGCA
CCGCCACCCTCAGCGTTGGCAGCGAGGCAGTCATGCACTTCTCCCCGCGC
GTCGCGGCCGCGGATATCGGTCGACAGGGGGTAGACGCCAAACCGCTGTC
GTCTCTAGTGCTGAAGAGACGGTGCCTCGTAGTGTTCGCCGACGAAGCGT
ACTCTCGCTTATTGCACGGCATAGACGCGGTGACGGAGGAGACCGTCGGC
GCACGCGGAGCCCCCGTCGTCAACGCCGATGCAGCCGGCTCGCCGGAGGG
TACGGTTGTGCAGCGACAGCTGAGGGTGTCGCTCACGTTCAGAAAGGTCA
AGGTTCGCTCTGGTGAAACCGGCGACTTGTGA
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