prot_M-pyrifera_M_contig102239.482.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102239.482.1
Unique Nameprot_M-pyrifera_M_contig102239.482.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length202
Homology
BLAST of mRNA_M-pyrifera_M_contig102239.482.1 vs. uniprot
Match: A0A8K1FMJ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ8_PYTOL)

HSP 1 Score: 68.9 bits (167), Expect = 2.450e-10
Identity = 49/163 (30.06%), Postives = 76/163 (46.63%), Query Frame = 0
Query:   29 IVVNCAAVARVS----EAKGCEGVNIPSVLILAVKKQPRCILVHFSTDLVYRGGEEGGXXXXXXGGVVLEPITAYGVQKAKADALIHTNLGSRGRVLRCSNIIGPPAPFTS--APKFLDWVKQNAERKVDDAEKRATVWSDEKRCFVHVEDVVEGVLRIVDDD 185
            ++VNC A+A  +    + +  + +N P  L+  ++ +    LVHFSTD VY G              +   +  Y   K   D  + T       VLR +N+IGP APF +   PKF++W+           E   T+WSDE R F++VED+   V  ++  D
Sbjct:   86 VIVNCVAMASPAACERDPERSKTLNEPRHLVEFLRGKG-IRLVHFSTDFVYEGSAPRPQSYYEEDASLRPSMCVYSSSKLSFDQFLMTQSDLDAVVLRIANVIGPRAPFFADQPPKFVEWLYTELFLSPTKQESPVTLWSDEIRSFLYVEDLARVVWSLIASD 247          
BLAST of mRNA_M-pyrifera_M_contig102239.482.1 vs. uniprot
Match: A0A7S1U2N4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2N4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.740e-9
Identity = 50/152 (32.89%), Postives = 67/152 (44.08%), Query Frame = 0
Query:   29 IVVNCAAVARVSEAKG----CEGVNIPSVLILAVKKQPRC--ILVHFSTDLVYRGGEEGGXXXXXXGGVVLEPITAYGVQKAKADALIHTNLGSRGRVLRCSNIIGPPAPFTSAPKFLDWVKQNAERKVDDAEKRATVWSDEKRCFVHVEDV 174
            +++N AA+  +++ +        VN P  L  A         +LV  STD VY G            G    P+  YG  K   +  +    G  G VLR SNI+GPPAPF+ A KFL W+   A           T+W DE R FV V D+
Sbjct:   75 VIINTAAMTSLADCEKNPDEASAVNAPEHLFAAAAAAAPAPPLLVQLSTDQVYDGAHA-----PYAEGDTAAPVNHYGATKLHCEQRMAA-AGVNGVVLRSSNILGPPAPFSGAGKFLQWL-DGALAAAAQGGDNVTLWDDEYRNFVWVYDI 219          
BLAST of mRNA_M-pyrifera_M_contig102239.482.1 vs. uniprot
Match: UPI001C770C41 (dTDP-4-dehydrorhamnose reductase n=1 Tax=Pseudoclavibacter triregionum TaxID=2820673 RepID=UPI001C770C41)

HSP 1 Score: 61.6 bits (148), Expect = 7.360e-8
Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 0
Query:    7 LSYTNLDIEDEEKVEEVVEGADIVVNCAAVARV----SEAKGCEGVNIPSVLILAVK-KQPRCILVHFSTDLVYRGGEEGGXXXXXXGGVVLEPITAYGVQKAKADALIHTNLGSRGRVLRCSNIIGPPAP 132
            LS   LDI D + V   +EGAD+V+NCAA   V    S+  G   VN     +LA    +    LVH+STD V++G                +PI  YG  KA+ +  I    G R  ++R + + G   P
Sbjct:   39 LSRKELDITDADAVRTAIEGADVVINCAAYTNVDGAESDEAGAYRVNAEGPAVLAEACAEAGATLVHYSTDYVFKGDATSPYPEDGP----YDPINVYGASKAEGEKAITAGNGERSYIIRTAWLYGNGGP 165          
BLAST of mRNA_M-pyrifera_M_contig102239.482.1 vs. uniprot
Match: A0A7S1U0Z1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0Z1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.050e-6
Identity = 40/121 (33.06%), Postives = 55/121 (45.45%), Query Frame = 0
Query:   29 IVVNCAAVARVSEAKG----CEGVNIPSVLILAVKKQPRC--ILVHFSTDLVYRGGEEGGXXXXXXGGVVLEPITAYGVQKAKADALIHTNLGSRGRVLRCSNIIGPPAPFTSAPKFLDWV 143
            +++N AA+  +++ +        VN P  L  A         +LV  STD VY G            G    P+  YG  K   +  +    G  G VLR SNI+GPPAPF+ A KFL W+
Sbjct:   75 VIINTAAMTSLADCEKNPDEASAVNAPEHLFAAAAAAAPAPPLLVQLSTDQVYDGAHA-----PYAEGDTAAPVNHYGATKLHCEQRMAA-AGVNGVVLRSSNILGPPAPFSGAGKFLQWL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102239.482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A8K1FMJ8_PYTOL2.450e-1030.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1U2N4_9STRA2.740e-932.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
UPI001C770C417.360e-832.82dTDP-4-dehydrorhamnose reductase n=1 Tax=Pseudocla... [more]
A0A7S1U0Z1_9STRA2.050e-633.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164
NoneNo IPR availableGENE3D3.40.50.720coord: 3..193
e-value: 2.0E-25
score: 91.7
NoneNo IPR availablePANTHERPTHR43242FAMILY NOT NAMEDcoord: 7..202
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 10..184
e-value: 1.3E-15
score: 57.5
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 8..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102239contigM-pyrifera_M_contig102239:12..617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102239.482.1mRNA_M-pyrifera_M_contig102239.482.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102239 12..617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102239.482.1 ID=prot_M-pyrifera_M_contig102239.482.1|Name=mRNA_M-pyrifera_M_contig102239.482.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
PPPSPILSYTNLDIEDEEKVEEVVEGADIVVNCAAVARVSEAKGCEGVNI
PSVLILAVKKQPRCILVHFSTDLVYRGGEEGGGEGDGEGGVVLEPITAYG
VQKAKADALIHTNLGSRGRVLRCSNIIGPPAPFTSAPKFLDWVKQNAERK
VDDAEKRATVWSDEKRCFVHVEDVVEGVLRIVDDDECCLVDAIGPELLSR
AE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf