mRNA_M-pyrifera_M_contig123404.4790.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: A0A5A8C4U6_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4U6_CAFRO) HSP 1 Score: 72.8 bits (177), Expect = 1.490e-12 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 4 GSGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTKYSRTGSYQGTWRGNVPHGYGT 213
G+ PLWR+ D A+K+G RRT + VAP+ R + R++A GP++ + TGSYQG WR N HG+GT
Sbjct: 12 GTEPLWRSRDRAAQKNGPRRTAFSVAPAARKVVNPHRISAAGPDGPISSFKATGSYQGEWRNNERHGFGT 81
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: A0A1V9Z3Q1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Q1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.910e-12 Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
Query: 1 EGSGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTKYSRTGSYQGTWRGNVPHGYGTRENGRGERYEGGFVDGKRHGQGTLWVR 294
+GS PLW+T D K+ K+G ++Y+V S + P + Y+ Y G W + GYGT+ G +YEG +VDGKRHG+GT WV+
Sbjct: 11 KGSNPLWKTWDAKSTKAGPHHSVYWVKRSAAHAAED--KYGNPNSNPKSHYTLAAKYNGDWAHDQKAGYGTQVCSNGNKYEGEWVDGKRHGKGTFWVK 106
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: A0A7S1A669_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A669_NOCSC) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-9 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 7 SGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTKYSRTGSYQGTWRGNVPHGYGTRENGRGERYEGGFVDGKRHGQGTLWVR-GKGGVLERRYAG 330
S PLWR + KA+K G R T+Y+V + G G VT+R+ +YQG W N GYG + G+++EG + +G RHG+GTLW GK L + Y G
Sbjct: 30 SVPLWRANNAKAQKVGKRSTIYWVGKNLVGE--DGTVTSRQGT----------TYQGEWLDNKKTGYGVQVYPSGDKFEGQWQEGLRHGEGTLWAPVGKAQKLRKIYVG 126
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: A0A3R7X1T2_9STRA (EF-hand domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7X1T2_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.630e-7 Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 1 EGSGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTKYSRTGSYQGTWRGNVPHGYGTRENGRGERYEGGFVDGKRHGQ 276
E + PLW+T D K+ KSG ++Y+V ++G +VG T + + Y G W +V GYGT+ G +YEG + DG RHG+
Sbjct: 21 EATNPLWKTWDAKSVKSGAHHSVYWV---KQGSTSNEDKFGHVEVGKST-FVQAAKYTGDWHDDVKSGYGTQLCASGNKYEGEWKDGCRHGK 108
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: A0A267DZB3_9PLAT (Uncharacterized protein (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DZB3_9PLAT) HSP 1 Score: 53.1 bits (126), Expect = 9.020e-6 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 1
Query: 7 SGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTK-YSRTGS-YQGTWRGNVPHGYGTRE----NGRG--ERYEGGFVDGKRHGQGTLW 288
S PLW+ D KA+K+GLR T+Y V RG G A K G T+ + TG+ Y+G WR G+G NG G ++Y GG+ KRHG G W
Sbjct: 16 SEPLWKEWDRKADKAGLRNTIYSV----RGDEYTGEWEANKKQGRGTQVWKGTGAMYEGDWRDGRRCGFGVYSVPLPNGAGYKKQYSGGWKADKRHGYGENW 113
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: A0A1I8GT34_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GT34_9PLAT) HSP 1 Score: 53.1 bits (126), Expect = 1.260e-5 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 1
Query: 7 SGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTK-YSRTGS-YQGTWRGNVPHGYGTRE----NGRG--ERYEGGFVDGKRHGQGTLW 288
S PLW+ D KA+K+GLR T+Y V RG G A K G T+ + TG+ Y+G WR G+G NG G ++Y GG+ KRHG G W
Sbjct: 27 SEPLWKEWDRKADKAGLRNTIYSV----RGDEYTGEWEANKKQGRGTQVWKGTGAMYEGDWRDGRRCGFGVYSVPLPNGAGYKKQYSGGWKADKRHGYGENW 124
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Match: UPI001C4D7EDA (PEGA domain-containing protein n=1 Tax=Marinobacter sp. CAU 1620 TaxID=2856822 RepID=UPI001C4D7EDA) HSP 1 Score: 52.0 bits (123), Expect = 3.290e-5 Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 133 VGPVTKYSRTGSYQGTWRGNVPHGYGTRENGRGERYEGGFVDGKRHGQGTLW 288
VG + Y+ +G W G V G GT E+ G RYEG FVDGK HG+GT W
Sbjct: 210 VGKLEAYTTVNYQKGNWVGGVKTGDGTYEDAEGLRYEGQFVDGKFHGEGTAW 261 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123404.4790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123404.4790.1 >prot_M-pyrifera_M_contig123404.4790.1 ID=prot_M-pyrifera_M_contig123404.4790.1|Name=mRNA_M-pyrifera_M_contig123404.4790.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp EGSGPLWRTADLKAEKSGLRRTMYFVAPSERGGLGGGRVTARKDVGPVTKback to top mRNA from alignment at M-pyrifera_M_contig123404:2..376- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123404.4790.1 ID=mRNA_M-pyrifera_M_contig123404.4790.1|Name=mRNA_M-pyrifera_M_contig123404.4790.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig123404:2..376- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123404:2..376- >mRNA_M-pyrifera_M_contig123404.4790.1 ID=mRNA_M-pyrifera_M_contig123404.4790.1|Name=mRNA_M-pyrifera_M_contig123404.4790.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig123404:2..376- (Macrocystis pyrifera P11B4 male)back to top |