mRNA_M-pyrifera_M_contig123347.4780.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A4Q2XG03_9BACT (Zinc metalloprotease n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2XG03_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 3.180e-6 Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 7 LIPRVFPFGAAAKAGFLAGDRIVTINGHRP---ASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
++ VF G AAKAG LAGD+IV INGH A +D++ + +S G I+ VER G A L ++
Sbjct: 140 IVGEVFENGPAAKAGILAGDKIVAINGHTVNGFAGTLDSITESIVLSKGKEIEFMVERAGSAAPLKLI 207
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A2N3IAZ4_9BACT (Alpha/beta hydrolase family n=1 Tax=Raineya orbicola TaxID=2016530 RepID=A0A2N3IAZ4_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 4.330e-6 Identity = 28/67 (41.79%), Postives = 39/67 (58.21%), Query Frame = 1
Query: 1 KLLIPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
KLLI R+ P AAAKAG GD I+T+ G +PA+ +D +RS SP I + V R+ + L +
Sbjct: 40 KLLITRILPQTAAAKAGLQVGDEILTLEGIKPANQMDLAKIVRSKSPREEISVVVRRNQQIFTLKPI 106
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A7W0ACN1_9GAMM (Zinc metalloprotease n=1 Tax=Halomonas kenyensis TaxID=321266 RepID=A0A7W0ACN1_9GAMM) HSP 1 Score: 51.2 bits (121), Expect = 8.120e-6 Identity = 26/64 (40.62%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 7 LIPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSV 198
++ ++ P AAA+AG AGDR++ +NG +D V+ +R+ SPG T++++VERDGE +L++
Sbjct: 225 VLGQILPGEAAAEAGLEAGDRVLAVNGTPIDEWMDFVSVVRA-SPGETLELEVERDGERRQLTL 287
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A533RPD7_9ACTN (Site-2 protease family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A533RPD7_9ACTN) HSP 1 Score: 50.1 bits (118), Expect = 1.900e-5 Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 10 IPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
I RV P AAAKAG + GDRIV+I G + ++ D V + +PG T+ ++ DG A +VV
Sbjct: 61 ISRVSPSSAAAKAGLVPGDRIVSIGGVKASNFQDLVMVIARYAPGDTVVVKWTHDGSARSATVV 124
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A2W4RR07_9PROT (Zinc metalloprotease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RR07_9PROT) HSP 1 Score: 50.1 bits (118), Expect = 2.060e-5 Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 10 IPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
+ V P AA AGF+ GD I+ I+G R S + V ++ S SPG + ++V+RDG+AL L+VV
Sbjct: 152 VDEVVPNSPAATAGFMPGDVILEIDGKRIDS-FNEVLRIVSTSPGRELTVKVDRDGQALTLTVV 214
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: UPI001E29D0CE (PDZ domain-containing protein n=1 Tax=Catenulispora rubra TaxID=280293 RepID=UPI001E29D0CE) HSP 1 Score: 50.1 bits (118), Expect = 2.120e-5 Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 7 LIPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELS 195
L+ V P GAAA+AG L GD ++++ + + DA++KL + G T+ + VER G+ L L+
Sbjct: 596 LVETVLPGGAAAEAGLLHGDVLLSVGNAKIQTADDAISKLSGYTKGATVHLVVERSGQTLNLT 658
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: X5MEK1_9HYPH (Zinc metalloprotease n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MEK1_9HYPH) HSP 1 Score: 48.9 bits (115), Expect = 5.280e-5 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 10 IPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
+ V P GAAA AGFL GD +V+I+G AS D + ++ S SP + VERDG ++L VV
Sbjct: 145 VDEVQPDGAAADAGFLPGDLVVSIDGSAIASFND-MQRIVSTSPERVLAFTVERDGSLVDLEVV 207
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A3N5KK35_9PROT (Zinc metalloprotease n=2 Tax=Bacteria TaxID=2 RepID=A0A3N5KK35_9PROT) HSP 1 Score: 48.9 bits (115), Expect = 5.320e-5 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 10 IPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
I +V P A +AG +GDRIV +NG+ P D +AK+ SPG ++ + +ERDG+ ++ VV
Sbjct: 221 IGQVLPSQVAQQAGIRSGDRIVAVNGN-PVGEWDQLAKIIHRSPGTSLALTIERDGQRQDVQVV 283
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A081G0R6_9GAMM (Zinc metalloprotease n=1 Tax=Marinobacterium sp. AK27 TaxID=1232683 RepID=A0A081G0R6_9GAMM) HSP 1 Score: 48.9 bits (115), Expect = 5.320e-5 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 31 GAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
GAA AG +AGD++++INGH + + V ++R SPG T+ + V+R + LEL VV
Sbjct: 233 GAAQAAGLMAGDKVLSINGHPVSGWMALVEEIRQ-SPGQTLSLGVQRGAQRLELEVV 288
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Match: A0A7L5YDF2_9PROT (Zinc metalloprotease n=7 Tax=Proteobacteria TaxID=1224 RepID=A0A7L5YDF2_9PROT) HSP 1 Score: 48.5 bits (114), Expect = 7.280e-5 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 7 LIPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTIDIQVERDGEALELSVV 201
+I V P GAAA+AGF +GDR+V NG + D V +R P ++ I+ ER+G+ EL+VV
Sbjct: 221 VIGEVLPGGAAARAGFQSGDRLVAANGKAVTNWQDWVKLIRQ-HPSQSLRIEYEREGQMRELTVV 284 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123347.4780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123347.4780.1 >prot_M-pyrifera_M_contig123347.4780.1 ID=prot_M-pyrifera_M_contig123347.4780.1|Name=mRNA_M-pyrifera_M_contig123347.4780.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp KLLIPRVFPFGAAAKAGFLAGDRIVTINGHRPASVIDAVAKLRSVSPGGTback to top mRNA from alignment at M-pyrifera_M_contig123347:281..481- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123347.4780.1 ID=mRNA_M-pyrifera_M_contig123347.4780.1|Name=mRNA_M-pyrifera_M_contig123347.4780.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=201bp|location=Sequence derived from alignment at M-pyrifera_M_contig123347:281..481- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123347:281..481- >mRNA_M-pyrifera_M_contig123347.4780.1 ID=mRNA_M-pyrifera_M_contig123347.4780.1|Name=mRNA_M-pyrifera_M_contig123347.4780.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig123347:281..481- (Macrocystis pyrifera P11B4 male)back to top |