prot_M-pyrifera_M_contig123108.4742.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123108.4742.1
Unique Nameprot_M-pyrifera_M_contig123108.4742.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length79
Homology
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BLAST of mRNA_M-pyrifera_M_contig123108.4742.1 vs. uniprot
Match: D7G788_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G788_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.120e-39
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 0 
Query:    1 MTSKSLNPYDTSAPTEMFGDPVVRVFDARMPSRPGPPLQFSMLGAPRLVRFLADESLLLASSSGQFLLSKEPFGGLVG 78
            MTSKSLNPYDTSAPTE+FGDPVVRVFDARMP+RPGPPLQFSMLGAPRLVRFLADESL LASSSGQFL+SKEPF G+ G
Sbjct:  204 MTSKSLNPYDTSAPTELFGDPVVRVFDARMPTRPGPPLQFSMLGAPRLVRFLADESLALASSSGQFLVSKEPFTGVGG 281
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BLAST of mRNA_M-pyrifera_M_contig123108.4742.1 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.950e-36
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0 
Query:    1 MTSKSLNPYDTSAPTEMFGDPVVRVFDARMPSRPGPPLQFSMLGAPRLVRFLADESLLLASSSGQFLLSKEPF 73
            MTSKSLNPYDTSAPTE+FGDPVVRVFDARMP+RPGPPLQFSMLGAPRLVRFLADESL LASSSGQFL+SKEPF
Sbjct:  169 MTSKSLNPYDTSAPTELFGDPVVRVFDARMPTRPGPPLQFSMLGAPRLVRFLADESLALASSSGQFLVSKEPF 241
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123108.4742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G788_ECTSI1.120e-3991.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX54_9PHAE1.950e-3694.52Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123108contigM-pyrifera_M_contig123108:269..505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123108.4742.1mRNA_M-pyrifera_M_contig123108.4742.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123108 239..505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123108.4742.1 ID=prot_M-pyrifera_M_contig123108.4742.1|Name=mRNA_M-pyrifera_M_contig123108.4742.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
MTSKSLNPYDTSAPTEMFGDPVVRVFDARMPSRPGPPLQFSMLGAPRLVR
FLADESLLLASSSGQFLLSKEPFGGLVGG
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