mRNA_M-pyrifera_M_contig122241.4587.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S0K1T0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K1T0_CAFRO) HSP 1 Score: 126 bits (317), Expect = 8.820e-31 Identity = 76/153 (49.67%), Postives = 98/153 (64.05%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELA 459
LGEAE FF A+A+V +P RA AL Q +RV E + +LL AC+Q+ S SL + LG +LR+ HQLNTAGK S+DL + ++SL +LS+TKAFDGKTT+L Y V Q +A D EAL +SKSL L +ASR + L ELA
Sbjct: 233 LGEAEAFFAAMADVKKPKARAMALHYQRQFRERVSELLERYKLLHQACSQVSESQSLKRALGWVLRVGHQLNTAGKGS----SADLGTRGLAVTSLAKLSSTKAFDGKTTVLLYTVGQARKAGDTEALMVSKSLPLASDASRIQLANLFSELA 381
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A5A8C7E2_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C7E2_CAFRO) HSP 1 Score: 123 bits (308), Expect = 1.720e-29 Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASR 426
LGEAE FF A+A+V +P RA AL Q +RV E + +LL AC+Q+ S SL + LG +LR+ HQLNTAGK S+DL + ++SL +LS+TKAFDGKTT+L Y V Q +A D EAL +SKSL L +ASR
Sbjct: 1380 LGEAEAFFAAMADVKKPKARAMALHYQRQFRERVSELLERYKLLHQACSQVSESQSLKRALGWVLRVGHQLNTAGKGS----SADLGTRGLAVTSLAKLSSTKAFDGKTTVLLYTVGQARKAGDTEALMVSKSLPLASDASR 1517
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S1G5T6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5T6_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.080e-19 Identity = 61/156 (39.10%), Postives = 88/156 (56.41%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELAAIR 468
LGEAE+FF AL EV R AL+ Q V + +LNAC+Q++ S L +V +L + ++LN AG + F+L SL RLS TKAF+ KTT+L +LV + R D D +L LS+ L LV A+R S++ +R EL+ ++
Sbjct: 689 LGEAERFFHALMEVPHLQRRVEALVYQRQFDGAVASLQLDAATMLNACSQVRESERLRRVFKAVLAVGNRLNAAGDEGGA-------ARGFKLQSLLRLSATKAFNNKTTVLHFLVSMIERGDRD-SLHLSEDLDLVHAAARLSLDIMRAELSTLK 836
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S2K972_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K972_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.990e-15 Identity = 50/160 (31.25%), Postives = 85/160 (53.12%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELAAIRGELS 480
LG E++ +A+ EV PD + + + +R+ E L L+AC +++ S L K++ ++LRI + +NT G + K F L++L +L KAFD KTT+LQYL++ + + D D + V EA R ++AL +L + G+L+
Sbjct: 328 LGLCEKYMIAMLEVTDPDLKFETMTFRSVYEERLSEIVKPIDLALSACREVRESIKLRKLMALVLRIGNHINTGGSGK--------LAKGFTLAALLKLQEAKAFDKKTTVLQYLIKIVKKNDKD-LCTFKNDIKSVQEAERVQMDALAGDLKILNGDLT 478
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S3HTK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTK0_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.780e-15 Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELAAIRGELSN 483
LG+AEQ+ + R RA++ + T R+ + + NAC +K S L KVL ILR+ +QLN K E F L SL +L + KAFD KT++LQY++ + R D D L + L + EASR +++A+ E +R E N
Sbjct: 175 LGQAEQYMKVMLGFKSAPKRIRAMIFKQTYRIRINDCATKLTKIENACDDVKLSGRLKKVLKTILRVGNQLNDGEKHE-----------GFTLDSLLKLQSAKAFDRKTSVLQYVITLISRNDAD-CLLFPEDLKHISEASRLTLDAVNTERKGLREEFDN 323
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S4MWB9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWB9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 4.820e-14 Identity = 51/155 (32.90%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 13 EQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELAAIRGEL 477
E++ +A+ EV+ + +L Q+ R+KE D +++ AC QI++S L K++ VIL + +Q+NT G F L +L +L KAFD KT++LQYLV+ L R +D+ L + LS EA I++L + + ++ EL
Sbjct: 376 ERYMVAMMEVNNASAKFDCMLFQIEFETRMKEIVDEITIMIEACDQIRSSQRLRKLMAVILTLGNQINTGGTGN--------LAAGFSLDALLKLDEAKAFDKKTSVLQYLVK-LIRTNDESLLKFKEDLSKSTEAEGVLIDSLLQNMKQMKEEL 521
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S3PZM8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZM8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 6.110e-14 Identity = 47/155 (30.32%), Postives = 86/155 (55.48%), Query Frame = 1
Query: 13 EQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELAAIRGEL 477
E++ +A+ +V ++ ++ Q+ R+ ++ED L+NAC +K S L K++ +IL I +Q+NT G S +L+ F L +L +L+ KAFD KT++LQYL+R + + +D E + K + + +A ++ L +L + EL
Sbjct: 308 EKYMVAMMDVSDASSKFNCMMFQIQFKSRIDDSEDAISTLMNACDDVKNSIRLRKLMAIILTIVNQINTGG-------SGNLAA-GFTLDALLKLNEAKAFDKKTSVLQYLIRVIKK-NDPEVIEFRKDIVSIEKAKGVMLDGLLGDLKQLTSEL 453
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S1XVY3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVY3_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 6.960e-13 Identity = 47/156 (30.13%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEALREELAAIR 468
L EAE+F + + ++D+ R A++ + +R+++ + Q + AC +K S +L IL+I +Q+N + KAF L +L++LS++KAFD +TT+L YLV + R +D+ L +++ L+ V ASR ++ LR + ++
Sbjct: 267 LNEAEKFMMEMLKLDKGSKRLEAMIYKSQFVERIQQIREDIQTIAKACDDLKMSGKFRTILRYILQIGNQMN------------EHEHKAFSLDALKKLSSSKAFDNRTTVLDYLVMVVKR-NDETLLDIAEELTGVQAASRVMMDTLRADFGQMK 409
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A2R5G1I3_9STRA (Formin-like protein 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1I3_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.390e-12 Identity = 52/149 (34.90%), Postives = 80/149 (53.69%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLN-TAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLVRQLHRADDDEALALSKSLSLVGEASRHSIEAL 444
LG+ E F L + R +A QL Q+V EA++ TQ++L AC +I+ S++L + L VIL + + LN T+ + F+L L ++ KA D KTT+LQ++VR++ L L+K L V +ASR S+ AL
Sbjct: 893 LGKIELLFRELGTISSLPQRIKAWTIQLRYKQQVAEAQEQTQMVLKACEEIEHSSALRQTLRVILALGNYLNGTSARG---------GAYGFKLDLLTKIENLKAADHKTTLLQFIVREIASKKHPVMLKLTKDLQHVADASRISVNAL 1032
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Match: A0A7S4W5J3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W5J3_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.880e-12 Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 1 LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQIKTSASLAKVLGVILRITHQLNTAGKSEDTSDSSDLSVKAFRLSSLQRLSTTKAFDGKTTILQYLV 348
L E E+F +A+ V P + RALL +L +++ E L+ AC ++ S K+LG++L I ++LNTAG+S AF + SL +L+ KAFD KTT LQY+V
Sbjct: 763 LCEIEKFMVAMMTVKYPKQKMRALLFKLQFASGIEDLEKDASLVEKACDELSQSVRFRKLLGIVLNIGNRLNTAGQSHKGK------AGAFTIDSLLKLNQAKAFDKKTTFLQYIV 872 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122241.4587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122241.4587.1 >prot_M-pyrifera_M_contig122241.4587.1 ID=prot_M-pyrifera_M_contig122241.4587.1|Name=mRNA_M-pyrifera_M_contig122241.4587.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp LGEAEQFFLALAEVDRPDTRARALLTQLTAPQRVKEAEDITQLLLNACTQback to top mRNA from alignment at M-pyrifera_M_contig122241:6..491+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122241.4587.1 ID=mRNA_M-pyrifera_M_contig122241.4587.1|Name=mRNA_M-pyrifera_M_contig122241.4587.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig122241:6..491+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122241:6..491+ >mRNA_M-pyrifera_M_contig122241.4587.1 ID=mRNA_M-pyrifera_M_contig122241.4587.1|Name=mRNA_M-pyrifera_M_contig122241.4587.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig122241:6..491+ (Macrocystis pyrifera P11B4 male)back to top |