mRNA_M-pyrifera_M_contig121766.4473.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A381ZIS1_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381ZIS1_9ZZZZ) HSP 1 Score: 170 bits (430), Expect = 1.420e-48 Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARALKTQY 441
AMAGI AR NVAAMCCG++ SL +A++Y ERRAFG+ +FQGL W LA+VATDL AA ++ A+ + G T+ AAHAKKFATRAA +GVA CMQAMGA GY YPLARHLA A+MA ++DGTT+IQNVVI+R L Y
Sbjct: 254 AMAGIELARANVAAMCCGIMASSLEVALTYCTERRAFGQRIADFQGLQWQLADVATDLHAARLMSYAALEAIDAGSPATIPAAHAKKFATRAAQNGVANCMQAMGADGYKHDYPLARHLACARMANYIDGTTEIQNVVISRELLRPY 400
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A2E9Y2W4_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y2W4_9PROT) HSP 1 Score: 164 bits (416), Expect = 1.050e-46 Identity = 87/143 (60.84%), Postives = 109/143 (76.22%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARAL 429
AMAGI+ AR NVAAMC GM+ SL +A++YA ERRAFG+ L+FQG+ W LA+VATDL A+ + A+ + G + AAHAKKFATRAA G+A+CMQAMGA GY +PLARHLA AKMAQ++DG+T+IQNVVI+R L
Sbjct: 234 AMAGIDLARANVAAMCSGMMANSLEVALAYAAERRAFGQRILDFQGVQWQLADVATDLHASHLMAYAALAAIDAGQPAAIPAAHAKKFATRAALAGIAQCMQAMGADGYKHDFPLARHLACAKMAQYIDGSTEIQNVVISRDL 376
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A2E8YGJ6_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YGJ6_9GAMM) HSP 1 Score: 161 bits (407), Expect = 2.060e-45 Identity = 86/143 (60.14%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARAL 429
AM GI+ ARINVAAMC GML +L +A Y R AFG++ FQG+ W+LA+VATDL A L DA R + G+ T+AAAHAKKFATR A +A+CMQ MGA G +PLARHLAAAK AQ+LDG T+IQNVVI+RAL
Sbjct: 231 AMQGIDLARINVAAMCAGMLERALDVATEYVSSRTAFGKTVSAFQGVQWMLADVATDLVAVRLLAADAARLSXAGEAXTVAAAHAKKFATRVALSRIADCMQVMGATGLSREFPLARHLAAAKXAQYLDGATEIQNVVISRAL 373
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A0A3YPQ3_BRAJP (Uncharacterized protein n=5 Tax=Bradyrhizobium japonicum TaxID=375 RepID=A0A0A3YPQ3_BRAJP) HSP 1 Score: 157 bits (397), Expect = 7.660e-44 Identity = 87/146 (59.59%), Postives = 109/146 (74.66%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARALKTQ 438
AM+GI+ AR V+AMCCGML+ SL A+ ER AFG T+EFQGL W+LA+VATDL A+ L A +RG+ T+ AAHAKKFATRAAF+GVA+CMQ GA G A P++RHLA+AK AQ+LDGTT+IQNVVI+R L+ +
Sbjct: 238 AMSGIDVARTLVSAMCCGMLQSSLTHALKATAERSAFGSRTIEFQGLQWMLADVATDLSASELLFAAAAAKLDRGERATIEAAHAKKFATRAAFNGVAQCMQLSGARGLLADTPISRHLASAKAAQYLDGTTEIQNVVISRFLQVR 383
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: W4LDG3_9BACT (Uncharacterized protein n=3 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4LDG3_9BACT) HSP 1 Score: 155 bits (393), Expect = 2.760e-43 Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLA--AAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARAL 429
AM I+ ARI V+AMC GMLR L AV Y R+AFG E QGL W+LA+VATDLEA+ ALTR A + GD P++ AAHAKKFATR DG+++CMQA+GA G+ +PLARHLA AKMAQ+LDGTT+IQNVVIAR+L
Sbjct: 235 AMEAIDIARIVVSAMCAGMLRRGLETAVDYIKNRQAFGAPLSERQGLQWMLADVATDLEASIALTRAASAALDAGD-PSMGVRAAHAKKFATRVTMDGLSQCMQALGANGFRQDWPLARHLACAKMAQYLDGTTEIQNVVIARSL 378
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A2D6TAM2_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6TAM2_9PROT) HSP 1 Score: 155 bits (393), Expect = 2.940e-43 Identity = 88/145 (60.69%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPT-LAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARALK 432
A+ GI+ ARI VAA CCGMLR + A+ YA +RRAFG++T EFQGL W+LA+ TD AA LT +A R + GD LAAAHAKKF+ R +A+CMQ MGAAGY YPLARHLAAAKMAQ +DGTT+IQNVVI+RA++
Sbjct: 236 ALHGIDIARIVVAAACCGMLRTGIDTALEYATQRRAFGQATAEFQGLQWMLADAETDWWAARLLTVEAGRLHDAGDPGAPLAAAHAKKFSPRVCLARLADCMQVMGAAGYRHDYPLARHLAAAKMAQIVDGTTEIQNVVISRAMQ 380
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A2E3P4L2_9PROT (Acyl-CoA dehydrogenase n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3P4L2_9PROT) HSP 1 Score: 156 bits (394), Expect = 3.100e-43 Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARALKTQY 441
AMAGIN AR+ VAA+CCGML E L A++Y +R AFGR L QGL W LA+VATDLEA LT A R + G+ AHAKKFATRAA G++ CMQAMGAAG A P RH AAAKM +FLDGTT+IQN+VI+R+L Y
Sbjct: 252 AMAGINMARMFVAALCCGMLAECLDRALAYGAQRMAFGRPILANQGLQWELADVATDLEACRRLTEHAARTLDAGEAGIAECAHAKKFATRAAVRGISACMQAMGAAGLRAEEPFGRHFAAAKMCEFLDGTTEIQNMVISRSLLRPY 398
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A352GQ37_9PROT (Acyl-CoA dehydrogenase n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A352GQ37_9PROT) HSP 1 Score: 155 bits (391), Expect = 5.940e-43 Identity = 87/143 (60.84%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARAL 429
AMAGIN AR+ VAA+CCGML E L A++Y +R AFGR L QGL W LA+VATDLEA LT A R + G+ AHAKKF+TRAA G++ CMQAMGAAG A P RH AAAKM +FLDGTT+IQNVVI+R+L
Sbjct: 234 AMAGINMARMFVAALCCGMLAECLDRALAYGAQRMAFGRPILANQGLQWELADVATDLEACRRLTEHAARTLDAGEAGITECAHAKKFSTRAAVRGISACMQAMGAAGLRAEEPFGRHFAAAKMCEFLDGTTEIQNVVISRSL 376
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A1H0BA32_9BRAD (Acyl-CoA dehydrogenase n=1 Tax=Afipia sp. GAS231 TaxID=1882747 RepID=A0A1H0BA32_9BRAD) HSP 1 Score: 154 bits (390), Expect = 6.340e-43 Identity = 82/146 (56.16%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARALKTQ 438
AM+GI+ AR V+AMCCGML SL A+ ER AFG T++FQGL W+LA++ATDL A+ L A +RG+ T+ AAHAKKF T+AAF+G+A+CMQ GA G A P++RHLA+AK AQ+LDGTT+IQNVVI+R L+ +
Sbjct: 225 AMSGIDVARTLVSAMCCGMLESSLAYALKSTSERSAFGSKTIDFQGLQWMLADIATDLSASELLFTAAASKLDRGERATIEAAHAKKFTTKAAFNGIAQCMQLAGARGLLAETPISRHLASAKAAQYLDGTTEIQNVVISRFLQAR 370
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Match: A0A848YFI2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A848YFI2_9HYPH) HSP 1 Score: 152 bits (384), Expect = 6.210e-42 Identity = 89/149 (59.73%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 1 AMAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLAEVATDLEAAAALTRDAIRCAERGDDPTLAAAHAKKFATRAAFDGVAECMQAMGAAGYDAAYPLARHLAAAKMAQFLDGTTQIQNVVIARALKTQYAD 447
AMAGI+ AR VAAMC G+LR L A+ R AFGR E QGL W +A+V+T L A + L DA R ER AAAHAKKFAT AAF G+ CMQA+GA G +PLARHLAAAKMAQ+LDGTT+IQNVVI+RAL+ YAD
Sbjct: 235 AMAGIDIARACVAAMCVGLLRAGLDTAMPRLMSRSAFGRPLAEQQGLQWQMADVSTSLRACSLLAYDAARLIERDGAAPEAAAHAKKFATEAAFAGLQACMQAVGADGLKQEFPLARHLAAAKMAQYLDGTTEIQNVVISRALQKAYAD 383 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121766.4473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121766.4473.1 >prot_M-pyrifera_M_contig121766.4473.1 ID=prot_M-pyrifera_M_contig121766.4473.1|Name=mRNA_M-pyrifera_M_contig121766.4473.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp MAGINTARINVAAMCCGMLRESLRIAVSYADERRAFGRSTLEFQGLNWLLback to top mRNA from alignment at M-pyrifera_M_contig121766:78..530- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121766.4473.1 ID=mRNA_M-pyrifera_M_contig121766.4473.1|Name=mRNA_M-pyrifera_M_contig121766.4473.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig121766:78..530- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121766:78..530- >mRNA_M-pyrifera_M_contig121766.4473.1 ID=mRNA_M-pyrifera_M_contig121766.4473.1|Name=mRNA_M-pyrifera_M_contig121766.4473.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig121766:78..530- (Macrocystis pyrifera P11B4 male)back to top |