mRNA_M-pyrifera_M_contig120824.4285.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A5A8D508_CAFRO (T-complex protein 1 subunit epsilon n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D508_CAFRO) HSP 1 Score: 197 bits (500), Expect = 2.920e-58 Identity = 95/121 (78.51%), Postives = 114/121 (94.21%), Query Frame = 1
Query: 1 ANILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
ANI+AARTV+S+LRTSLGP+GMDKM+VSPDG+VTITNDGATIL +++VEH+VAKL+VEL+ SQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHP+R+++GFE AC AV+HL I+ER+E
Sbjct: 32 ANIMAARTVTSILRTSLGPRGMDKMMVSPDGEVTITNDGATILQRLQVEHEVAKLIVELATSQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPVRIADGFEEACSIAVDHLAKISERVE 152
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A8J2SYN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYN6_9STRA) HSP 1 Score: 190 bits (483), Expect = 3.420e-58 Identity = 95/119 (79.83%), Postives = 109/119 (91.60%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERI 360
NI+AAR+VS +LRTSLGPKGMDKM+VSPDGDVTITNDGATIL KM VEH+VA+L+VELS SQDDEIGDGTTGVVVLAGALLEQAE LLDRG+HP+RV+EGFE ACQ ++E LE IA+ +
Sbjct: 33 NIMAARSVSGLLRTSLGPKGMDKMMVSPDGDVTITNDGATILDKMAVEHQVARLLVELSQSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGLHPVRVAEGFEAACQVSLETLEKIADTV 151
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A7S0SVM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVM0_9STRA) HSP 1 Score: 186 bits (472), Expect = 7.940e-58 Identity = 91/120 (75.83%), Postives = 112/120 (93.33%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
NI+AAR+VS++LRTSLGPKGMDKMLVS DGDVTITNDGATIL KMEVEH+VAKL+V+LS SQD+EIGDGTTGV VLAGALLEQAE LLDRG+HP+R++EGFE+A + A++HL +I++++E
Sbjct: 33 NIMAARSVSNLLRTSLGPKGMDKMLVSSDGDVTITNDGATILQKMEVEHQVAKLLVDLSKSQDNEIGDGTTGVTVLAGALLEQAERLLDRGLHPVRIAEGFELASEVALKHLATISDKVE 152
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI) HSP 1 Score: 196 bits (497), Expect = 8.080e-58 Identity = 97/120 (80.83%), Postives = 112/120 (93.33%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
NILAAR+VS++LR+SLGPKGMDKMLVSPDGDVTI+NDGATIL KM+VEH+VA+L+VELS SQDDEIGDGTTGVVV+AGALLEQAE LLDRGIHP+R+ EGF+ ACQ AVEHLE IA+ +E
Sbjct: 33 NILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVE 152
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A7S3K1X2_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X2_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.620e-57 Identity = 99/120 (82.50%), Postives = 110/120 (91.67%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
NILAAR VS ++RTSLGPKGMDKMLVSPDGDVTITNDGATIL KM VEH+VA+LMVELSASQD+EIGDGTTGVVVLAGALLEQAE LLDRG+HP+R++EGFE AC A +HLE IAE+IE
Sbjct: 33 NILAARLVSGLVRTSLGPKGMDKMLVSPDGDVTITNDGATILDKMAVEHQVARLMVELSASQDEEIGDGTTGVVVLAGALLEQAEKLLDRGLHPVRIAEGFEKACAVASQHLEEIAEKIE 152
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A6V7IK30_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7IK30_9HYME) HSP 1 Score: 184 bits (468), Expect = 4.130e-57 Identity = 89/117 (76.07%), Postives = 109/117 (93.16%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAE 354
+ILAAR++++ LRTSLGP+G+DK++VSPDGDVT+TNDGATIL KM+V+H++AKLMV+LS SQDDEIGDGTTGVVVLAGALLEQAE LLD+GIHPIR+++GFE+A Q AVEHL IAE
Sbjct: 2 HILAARSIANTLRTSLGPRGLDKLMVSPDGDVTVTNDGATILKKMDVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAESLLDKGIHPIRIADGFELAAQCAVEHLNRIAE 118
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A7S1XSM7_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM7_9STRA) HSP 1 Score: 193 bits (490), Expect = 9.730e-57 Identity = 97/118 (82.20%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 1 ANILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAE 354
ANILAAR+VSSVLRTSLGPKGMDKMLV+PDGDVT++NDGATIL KMEVEH+VA+L+VELS SQDDEIGDGTTGVVVLAGALLEQAE LLDRGIHP+RV+EGFE AC+ A HL I++
Sbjct: 39 ANILAARSVSSVLRTSLGPKGMDKMLVNPDGDVTVSNDGATILEKMEVEHQVARLLVELSRSQDDEIGDGTTGVVVLAGALLEQAERLLDRGIHPVRVAEGFEKACEVATRHLADISD 156
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A0C3PT43_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3PT43_9AGAM) HSP 1 Score: 188 bits (478), Expect = 1.010e-56 Identity = 89/120 (74.17%), Postives = 114/120 (95.00%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
+ILAARTV+++LRTSLGP+G+DK+L+SPDGD+T+TNDGATIL++MEVEH++AKLMV+LS SQDDEIGDGTTGVVVLAGALLEQ+E LLDRGIHPIR+++GFE AC AV+HL+ I++++E
Sbjct: 39 HILAARTVANILRTSLGPRGLDKILISPDGDITVTNDGATILSQMEVEHQIAKLMVQLSKSQDDEIGDGTTGVVVLAGALLEQSEALLDRGIHPIRIADGFERACGVAVDHLDGISDQVE 158
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A7S2XY11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY11_9STRA) HSP 1 Score: 186 bits (471), Expect = 3.760e-56 Identity = 92/121 (76.03%), Postives = 111/121 (91.74%), Query Frame = 1
Query: 1 ANILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
ANILAAR VS+VLR+SLGPKGMDKMLV+ DGDVTI+NDGATIL KMEV+H+VAKL+VELS SQD+EIGDGTTGVVVLAGALLEQA+ LLDRGIHP+R++EG+E AC A++HL IA++++
Sbjct: 30 ANILAARAVSNVLRSSLGPKGMDKMLVNSDGDVTISNDGATILEKMEVDHQVAKLLVELSQSQDNEIGDGTTGVVVLAGALLEQADKLLDRGIHPVRIAEGYERACTVALDHLNQIADKVD 150
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Match: A0A6U3ULQ3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ULQ3_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.770e-56 Identity = 96/120 (80.00%), Postives = 111/120 (92.50%), Query Frame = 1
Query: 4 NILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHKVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEHLLDRGIHPIRVSEGFEVACQAAVEHLESIAERIE 363
NILAAR++S++LRTSLGPKGMDKMLVSPDGDVTITNDGATIL +M V+H+VAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAE LL+RGIHP+RV+EGFE A + A+E L+ I +R+E
Sbjct: 33 NILAARSISNILRTSLGPKGMDKMLVSPDGDVTITNDGATILDRMHVDHQVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEKLLNRGIHPVRVAEGFEKAAEVAIETLDKIGDRVE 152 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120824.4285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120824.4285.1 >prot_M-pyrifera_M_contig120824.4285.1 ID=prot_M-pyrifera_M_contig120824.4285.1|Name=mRNA_M-pyrifera_M_contig120824.4285.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp ANILAARTVSSVLRTSLGPKGMDKMLVSPDGDVTITNDGATILAKMEVEHback to top mRNA from alignment at M-pyrifera_M_contig120824:153..515+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120824.4285.1 ID=mRNA_M-pyrifera_M_contig120824.4285.1|Name=mRNA_M-pyrifera_M_contig120824.4285.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig120824:153..515+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120824:153..515+ >mRNA_M-pyrifera_M_contig120824.4285.1 ID=mRNA_M-pyrifera_M_contig120824.4285.1|Name=mRNA_M-pyrifera_M_contig120824.4285.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig120824:153..515+ (Macrocystis pyrifera P11B4 male)back to top |