mRNA_M-pyrifera_M_contig1208.4280.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1208.4280.1
Unique NamemRNA_M-pyrifera_M_contig1208.4280.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: D8LBD3_ECTSI (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD3_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 2.080e-127
Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDLL 540
            MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITE+TPKYGGAVVYSMSDVPLGFGVAAQPTE+CKDLDPTAVVVLHQADVGEYLRVEDDLL
Sbjct:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEFCKDLDPTAVVVLHQADVGEYLRVEDDLL 180
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A835ZB99_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB99_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.920e-105
Identity = 148/178 (83.15%), Postives = 162/178 (91.01%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDD 534
            MRPLTD+ET  LFEKLANYIGK+IE+LINRPDE  CFRLHKDRVYYVSERLMRQ+T+VSRD LLSLGTCFGKFTK+ KFRL IT LDYISQYAK+KVWVKP AEMSFLYGNHV KSGL RITE+TP+Y G VVYSM+D+P+GFGVAAQ TEYC+DLD  AVVVLHQAD+GEYLRVEDD
Sbjct:    1 MRPLTDEETATLFEKLANYIGKDIEKLINRPDEAYCFRLHKDRVYYVSERLMRQSTNVSRDNLLSLGTCFGKFTKTKKFRLGITCLDYISQYAKHKVWVKPGAEMSFLYGNHVAKSGLARITEATPQYAGVVVYSMNDIPMGFGVAAQATEYCRDLDAAAVVVLHQADIGEYLRVEDD 178
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A7S2S5A9_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5A9_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.560e-95
Identity = 136/180 (75.56%), Postives = 158/180 (87.78%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDL 537
            MRPLT+DETK+LF+KLA YIGK+IEQ+INR DE+ CFRL KDRVYYVSE  M+ + S+SRD +L  GTC GKF+KSGKFRLH+TALDY+SQYAKYKVWVKPSAEMSFLYGN++ KSGL RITESTP+Y G VVY+MSD+PLGFGV+AQ TE CKDL+P   VVLHQAD+GEYLR VEDD+
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGKSIEQMINRKDERHCFRLMKDRVYYVSESAMKYSASISRDNILHFGTCLGKFSKSGKFRLHVTALDYLSQYAKYKVWVKPSAEMSFLYGNNILKSGLARITESTPQYAGVVVYNMSDLPLGFGVSAQNTEACKDLEPMGNVVLHQADIGEYLRGVEDDM 180
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: B5Y3S4_PHATC (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3S4_PHATC)

HSP 1 Score: 281 bits (718), Expect = 1.820e-94
Identity = 134/180 (74.44%), Postives = 158/180 (87.78%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDL 537
            MRPLT++ETK LF KL+ YIGKNIE+LINR DE+ CFRL KDR YY+SE +M+ ATS+ R+ LL +GTC GKFTK+GKFRLHITAL+YISQYAKYKVWVKPSAEMSFLYGNHV K+GL R+TE+TP+Y G VVYSMSD+PLGFGVAAQ TE+C+ LDPT  VVLHQAD+GEYLR +E+D+
Sbjct:    1 MRPLTEEETKSLFLKLSEYIGKNIERLINRSDERHCFRLIKDRCYYISESIMKSATSIGREHLLHVGTCMGKFTKTGKFRLHITALEYISQYAKYKVWVKPSAEMSFLYGNHVSKNGLARMTENTPQYSGVVVYSMSDIPLGFGVAAQSTEHCQQLDPTGNVVLHQADIGEYLRGLEEDM 180
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A6I9Z2T1_9SAUR (60S ribosome subunit biogenesis protein NIP7 homolog n=21 Tax=Sauria TaxID=32561 RepID=A0A6I9Z2T1_9SAUR)

HSP 1 Score: 278 bits (710), Expect = 2.900e-93
Identity = 129/179 (72.07%), Postives = 157/179 (87.71%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 537
            MRPLT+DET+VLFEKLA Y+G+NI+ L++RPD   CFRLHKDRVYY+SERL++ AT++ RD+L+SLGTCFGKFTK+ KFRLHITALDY++ YAKYKVWVKP AE SFLYGNH+ KSGLGRITEST +Y G VVYSM+DVPLGFGVAA+ T+ C+ +DP A+VV HQAD+GEY+R E+ L
Sbjct:    1 MRPLTEDETRVLFEKLARYVGENIQLLVDRPDGTYCFRLHKDRVYYLSERLLKLATNIPRDSLVSLGTCFGKFTKTQKFRLHITALDYLAPYAKYKVWVKPGAEQSFLYGNHLLKSGLGRITESTAQYQGVVVYSMADVPLGFGVAAKTTQECRKVDPMAIVVFHQADIGEYIRHEETL 179
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A7S3PW11_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW11_9STRA)

HSP 1 Score: 277 bits (708), Expect = 6.270e-93
Identity = 136/181 (75.14%), Postives = 160/181 (88.40%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLH-KDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDL 537
            MRPLT+DETK+LF+KLA YIG++IE++INR DE+ CFRL  K+RVYYVSE +M+ + SV+RD LLS GTC GKFTKSGKFRLHITALDY+SQYA+YKVWVKPSAEMSFLYGN+V KSGL RITESTP+Y G VVYSMSD+PLGFGVA+Q T+ CKDL+P   VVLHQAD+GEYLR +EDD+
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGRSIEKMINRSDERHCFRLAAKNRVYYVSESVMKASNSVARDNLLSFGTCLGKFTKSGKFRLHITALDYLSQYAQYKVWVKPSAEMSFLYGNNVLKSGLARITESTPQYAGIVVYSMSDIPLGFGVASQGTDACKDLEPMGNVVLHQADIGEYLRGMEDDI 181
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: NIP7_XENTR (60S ribosome subunit biogenesis protein NIP7 homolog n=13 Tax=Sarcopterygii TaxID=8287 RepID=NIP7_XENTR)

HSP 1 Score: 276 bits (706), Expect = 1.180e-92
Identity = 128/179 (71.51%), Postives = 155/179 (86.59%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 537
            MRPLTD+ETK +FEKL+ YIG+NI+ L++RPD   CFRLH DRVYYVSER+++ AT+++RD L+SLGTCFGKFTK+ KFRLH+TALDY++ YAKYKVWVKP AE SFLYGNHV KSGLGRITE+T +Y G VVYSM+D+PLGFGVAA+ T+ C+ LDP A+VV HQADVGEY+R ED L
Sbjct:    1 MRPLTDEETKAMFEKLSKYIGENIKLLVDRPDGTYCFRLHNDRVYYVSERILKLATNIARDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEYIRHEDTL 179
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A8C4T854_ERPCA (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T854_ERPCA)

HSP 1 Score: 275 bits (704), Expect = 2.380e-92
Identity = 128/179 (71.51%), Postives = 156/179 (87.15%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 537
            MRPLTD+ETK LFEK++ YIG+NI+ L++RPD   CFRLHKDRVYY+SE+L++ +T++SRD L+S+GTCFGKFTK+ KFRLH+TALDY++ YAKYKVWVKP AE SFLYGNHV KSGLGRITE+T +Y G VVYSM+DVPLGFGVAA+ T+ C+ LDP A+VV HQAD+GEYLR ED L
Sbjct:    1 MRPLTDEETKALFEKVSKYIGENIKLLVDRPDGVYCFRLHKDRVYYLSEKLLKLSTNISRDKLISVGTCFGKFTKTMKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKLDPMAIVVFHQADIGEYLRSEDTL 179
[Close]
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A1Y1VL50_9FUNG (60S ribosome subunit biogenesis protein NIP7 n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VL50_9FUNG)

HSP 1 Score: 275 bits (703), Expect = 3.380e-92
Identity = 125/180 (69.44%), Postives = 154/180 (85.56%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDLL 540
            MRPLT++ETKV F+KLA YIG+NI  LINRPD+  CFRLH +RVYYVSE++M++AT + RD LLSLG CFGKFTK+GKFRLHIT+LDY++QYAKYK+WVKP+ EM F+YGNHV K+ LGRITE TP++ GA++YSM+DVPLGFGV A+ T  C+ LDPT +VV HQAD+GEYLR E+ LL
Sbjct:    1 MRPLTEEETKVFFQKLAQYIGRNIVHLINRPDDTYCFRLHNNRVYYVSEKIMKKATCIGRDQLLSLGVCFGKFTKTGKFRLHITSLDYLAQYAKYKIWVKPNGEMPFMYGNHVLKAHLGRITEDTPEHQGAIIYSMNDVPLGFGVTARSTSDCRKLDPTGIVVFHQADIGEYLRGEETLL 180
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BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A401NXV3_SCYTO (60S ribosome subunit biogenesis protein NIP7 homolog n=8 Tax=Gnathostomata TaxID=7776 RepID=A0A401NXV3_SCYTO)

HSP 1 Score: 275 bits (702), Expect = 4.800e-92
Identity = 129/179 (72.07%), Postives = 155/179 (86.59%), Query Frame = 1 
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 537
            MRPLT++ET++LFEKLA YIG+NI+ L+ RPD   CFRLHKDRVYYVSE++++ AT++SRD L+SLGTCFGKFTK+ KFRLHITALDY++ YAKYKVWVKP  E SFLYGNHV KSGLGRITEST +Y G VVYSM+D+PLGFGVAA+ T+ C+ +DP A+VV HQADVGEY+R ED L
Sbjct:    1 MRPLTEEETRLLFEKLAKYIGENIKLLVERPDGTYCFRLHKDRVYYVSEKILKLATNISRDKLVSLGTCFGKFTKTLKFRLHITALDYLAPYAKYKVWVKPGTEQSFLYGNHVLKSGLGRITESTAQYQGVVVYSMADIPLGFGVAAKSTQDCRRVDPMAIVVFHQADVGEYIRNEDTL 179
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD3_ECTSI2.080e-12798.8960S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A835ZB99_9STRA3.920e-10583.1560S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A7S2S5A9_9STRA1.560e-9575.5660S ribosome subunit biogenesis protein NIP7 homol... [more]
B5Y3S4_PHATC1.820e-9474.4460S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A6I9Z2T1_9SAUR2.900e-9372.0760S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A7S3PW11_9STRA6.270e-9375.1460S ribosome subunit biogenesis protein NIP7 homol... [more]
NIP7_XENTR1.180e-9271.5160S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A8C4T854_ERPCA2.380e-9271.5160S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A1Y1VL50_9FUNG3.380e-9269.4460S ribosome subunit biogenesis protein NIP7 n=3 T... [more]
A0A401NXV3_SCYTO4.800e-9272.0760S ribosome subunit biogenesis protein NIP7 homol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1208contigM-pyrifera_M_contig1208:8749..14460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.5
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D8LBD3
Preferred nameNIP7
KEGG koko:K07565
Hectar predicted targeting categoryother localisation
GOsGO:0000463,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902626,GO:1990904
EggNOG free text desc.ribosome assembly
EggNOG OGsCOG1374@1,KOG3492@2759
Ec32 ortholog descriptionRibosome biogenesis factor, NIP7
Ec32 orthologEc-27_004360.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons3
Model size543
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1208.4280.1prot_M-pyrifera_M_contig1208.4280.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1208 8749..14460 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.4067163-CDS-M-pyrifera_M_contig1208:8748..90091622815727.4067163-CDS-M-pyrifera_M_contig1208:8748..9009Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1208 8749..9009 -
1692277541.0690587-CDS-M-pyrifera_M_contig1208:8748..90091692277541.0690587-CDS-M-pyrifera_M_contig1208:8748..9009Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1208 8749..9009 -
1622815727.4227865-CDS-M-pyrifera_M_contig1208:9905..100441622815727.4227865-CDS-M-pyrifera_M_contig1208:9905..10044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1208 9906..10044 -
1692277541.081658-CDS-M-pyrifera_M_contig1208:9905..100441692277541.081658-CDS-M-pyrifera_M_contig1208:9905..10044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1208 9906..10044 -
1622815727.4368947-CDS-M-pyrifera_M_contig1208:14317..144601622815727.4368947-CDS-M-pyrifera_M_contig1208:14317..14460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1208 14318..14460 -
1692277541.0975194-CDS-M-pyrifera_M_contig1208:14317..144601692277541.0975194-CDS-M-pyrifera_M_contig1208:14317..14460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1208 14318..14460 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1208.4280.1

>prot_M-pyrifera_M_contig1208.4280.1 ID=prot_M-pyrifera_M_contig1208.4280.1|Name=mRNA_M-pyrifera_M_contig1208.4280.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSER
LMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVK
PSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPT
EYCKDLDPTAVVVLHQADVGEYLRVEDDLL*
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mRNA from alignment at M-pyrifera_M_contig1208:8749..14460-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1208.4280.1 ID=mRNA_M-pyrifera_M_contig1208.4280.1|Name=mRNA_M-pyrifera_M_contig1208.4280.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5712bp|location=Sequence derived from alignment at M-pyrifera_M_contig1208:8749..14460- (Macrocystis pyrifera P11B4 male)
ATGAGACCGCTCACAGACGATGAGACAAAGGTGCTGTTCGAGAAGTTGGC
CAACTACATCGGGAAGAACATTGAGCAGCTCATCAACCGCCCGGACGAGA
AGTGTTGCTTTCGATTGCACAAGGACCGGGTCTACTACGTCAGGTTCGTC
TGCCAGTTTTTGCCGCTGCCGCATCATGCGAACTCGTCTTGTCTGGCTCG
TATAGCAAGAGGCCACCTATACGTAAATCGCCTTCTATGTTTTGTTAGCC
ACTCGCTCGGGCCACGAGAGAGCAGTCATCAAGCCTGCGATTTGAGCTCC
AGGATTACTGATGTACCACATACAGCAGTGGGAGCCCTAAACCCCTTTGG
AGTCAAGGCTTGCATTTGTGTAACTCGAGGTCGAGCTATTTGAGCTGTAT
GCCATGTAGACGACAGCACAAACGTCAAATTCTAGTCCGATTCCGGAGGA
AACAATGCTGGCCACCGATGCTCCTCTGGTTTGGACGCTCTGTACGAAGT
ATGTGTGTCCCATCCGCGGGGTGGCTCTACATCTATCTGGTTGCCGGGAC
CTCCTTGACAACGGTACAACGGTCCGCGTGCATTCGTCAACCGTTTTGTC
TACGTCTGTCCAAAGGGTGACTACTTAACTCTGCTGGGCTAGTCTATACC
GGGTATAACCTGATAGGTGCCTCTGGACCTGGTAACCTGTTATTAATGCC
TCTGGTACATTGTTTTTCCATACTTTCGTTGAACCGAGGACAAACGTATT
TCTCACGTATTCGCACCGCCAATATCTGACTCGTCGTACCTGTAAGGAAA
CCTGTATGAGAAACCTTTTTCATGATAGTCGAATAAGACAAAATGAAATT
GATTTGGTTTGAATAGAATTTCGTGAAAAAATTGCCTTTGGGTCCTATCG
GGGAATAGCGTATTTTAAAAAATTCGAAATCCTCACAAGGGTCAATGAAC
ACCCGAGGGCAACCAACGAGGCGAGCGGCGGCCCGGGTCCTCCCCGAGGC
ACCGCGGTCAGTGGCCGATTGTTTCTGCCGGCACCGCCGAAGAGGCTACC
GCTCTTGGGACGTCTCGGGTGGCTAGCGCCGCCCCAAAGCCCCACGCAGG
CAGCAGCGATGGGGATACAGCGATCGAACTTCTGAGCGAAGTCGTGACCT
GGTCGGTGCTCGTGTTGTTTGCGAGTCAAAGTTGGATGAAAAACTGGGTT
TGCGACGGCCTTGTAATTTTTTGAGGCGCCGCAGATGATCTACTCTGTGA
TAGGGACCGTCGGACCTCGCGCTGCGGGTGCTCCGGTGGCCCTGCCTCTC
GGGAATAGTGGATCTCACCTGTGAGCAGTCGACGACACGGCTCAAGTTTG
CGTGGCTTGCTTCGGTTTCAGGAATAGGCCACGTGGAGTTGGACAAACTC
CCCAAATTGAATAACACGAAGAGCAAAAGAAGTCCCAAAAGACTTTTGTC
GAATTCGTTTTCTTTGTCTTAGGGCCGTCCGTTCCTAACGAACCGAAAAG
AAAACACGATTCGTGACATTTTGGCATGCCAAAATATCACGATCCGTGAC
ATGTCAGTTCTACCGAAAAAAGCCGATAAACGTGACACGTTTCGTGATGT
TTTAAAATTGTAAAAAATCCGATATTTCAAAATCCAACGATTTTTGGGGG
TGGAACCAACTCTCGCGAGTGGGGCACGGCAAGGCCGGGCCGGGCCGACC
GCGCCTGGCCCAGCCCGTGATATATTCGAATCACGGGCCGAAACCTGACC
CAGCCTGCGAGATTCCAATTTCACCGACCGTCGGCCAAGCCCGGTTCGCG
AGTTCGCGAGATTCCATCTCGCAGGGCGTCTGCCCGGCCTGGCCTGTGAC
ATCCTCAAGTCATTTTCGCGTTTGTCTTCGAGCTGTGGCTCCTTCTCCTC
GAAATGTCGCGGCCACAACCTCCTCGTTAGCCCGCCCGCGCCCAGCGGTG
TCTTTGGGTAGCCGCCCGTTGTCCACAAGCGGCGTACGAAGCAGAGTCCG
CCATGCCCCTACACCGACCTTCGGATACCATTGGTGCGCGTGGGTTGCGT
GTAGTGCCTCGATCAGGCGTATTTCGAGACACGACACATGTCACGAATCG
TGATTTTTTTTTTTAGTAGCGTCATGAATCGTGATTTTTTTGTCGTGATT
CACGACAACGATTCACGCCAGAAATCTCACGCATCGTGATTTTTTTTGTT
CGTTAGGAATGGCCCTTATTTGAATCGAAAGTCAAAATGCCTGCTTGGTG
ATTCACTTTTCGACCAATCAGATGCGAACCAAACCAAACGAAAAAAAGAT
TGGTGGGGTATCATGAAAAAAAGTTTCTCGTCAAGATGGGTCCTAAGGGC
CTTTATTAACGAGCTTTTTTTTCTATGATTGGATTTTTTTTTTTTAAATG
ATTTGATTTGAATAATTTCGTGAAAATAGAGTGCGCATAATGTATTTGTT
TATCAAGGAAATTCGAAGGAAAACGATAATCATAATCGAAAACCGTCCGG
CATGCGCATAATCATGGACGAAAAAAAGCTAAATATTGGATTCTTATGTT
GGAAAAAATAATACTTGCGGCAGCGGCAGCACTTGCAGGACCAAAGAGCT
GAACTGAAGTCGTGAAATCAGCAGTACCTTCCTGCAGCGGCAAGCAGTAG
CAGCAGCAGCAGCAAGCTGCAGAAACAGTAAGCAGCAGCAAGCACCAACA
GGCAGAAGTGCGGTCTGTCTCGCGCTCCTCGACACTCGCTGTGCAAGCAA
CGCCGCCGCCACATCGAGAAGATCGCCCTCCTTCGTTGCCCTCTCTGCCC
GAAAAGGGGTGGTAGCGGCGAAGGTCGGGAGCGTGGCGGCAAGGGTGCAC
GCGCTTGCAGCAGCAGCAGCACCAGCCGCAAGCAGCAGCGCTTGCTTACC
GCATTGCTCGCTTGCCGCAGCGCTTGCAGCAACAGCACTGCAGCAAGCAG
CACACTTACTTGCAGTAGCAGCAGCAGCAGCAGCACCTATGTGCTGCAGC
AGCAGGCAGTAGAGACATGCAGCAGCAGCAGCAGCACTTCTTCTCGCAAA
ACCCCGCTAGTTTCGGACGTGGCCCGAGGCCACTCTCCGGGTAAGCTTGG
TCAGTCCGAAGCATCCGGAGAGTTTTCGGCGAACAGAATGCAGCGGTCAA
ATCTCATATCACACAAATATGGCTCTAGTATAATATGCTATCCAAAAATG
CATAAGTTCGTCATATGTGTGCAAATTTGATCATGTTTTTTTATTAGTCG
TCGGTAACGGGAGAGTAGATGAGCAAAGATCGTATTGTATTTTATTTTGC
GCAGACACTCTAGTATGACTTTGGGTCCTATCGAGGAATCGCCTGCTTGA
TTCACTTTTTGACCACTCAGATGCAAATGAAATCAAACGACGAAAATGTT
TTCGACATAAAAAAAATGTTCGCCCTAAGGCTGTTTCCTATGCGGTTCAG
ATTTTGAGCTTCAAATTTTGACCCGATCGCGTTTTTCAACTGTGCAGTTC
GCAAATCGAAACAGTCTTCCTATGCGGAAAAATTGGACTTACTGTGCGTG
CAGAGATTCGAGCAAACGCCGACCAAAGTTGTATCATAGTCCGCGCGGTA
CGTATCCACGGAGAGGTGCGCGCCGAGAGCCTCTTAAGGTCTCTAGGCCC
GAGCCCGCGCCAGCCGACTGTAGTATGGCCACAGAGACACGCACCGCCCG
CCGACCGCGCGTCGGGCGCGAAGCAACGTCGCTATACAGCTGTCACCATC
CAACTCATCGATCGTTCTGCCTGCTGTTTGCTGTCGTGGATAACATCTTG
AATATAGATTCCATGCCATTTTCGATAAGAAAGCGTAATGACCGAAGGCG
TCGGATTTTGGGCCAAAATCTGACGACTTGGGCGATCGGATTCTCCAAAT
CGATATTTTGCCGGTCAGATTTTGCATATTCGGACTGCATTGCAGATGCT
TTCATTTTCGGGATCGAAAAATACAAATCTGAAGCTCGAAACCGAACCGC
ATAGGAAAAAAACAGCCTAAGCTCTGTTCATACTTGACGTTCGGTTTATG
CATGTTTGCGCACGACCCAAGTTCCATCTGCAGTAATAGCATCGAACAGC
GCCCACGTACATCCAACAGACAGTCAATATCCATAGCACTGCTGTAGTTC
GTACCTACTGTACTGTAGTATAATAGTACCCGGTAGTTTTTTTCACAGAT
AAGCTATGATATGATAGGAAGTACCGTGCGCACATTTTTGGGGCCATACG
CGTGGAACTAGAGTTGGATCATTTTCGCTGCAGCAGCTGATTTGACGTGA
ATTTTAAAGAGCGGCTTTTCCCTGAGGTTTTCTTCGTGTTGATCAACTTG
CATCGAGCACAAATTCCAACAAACTCACCTCGCCAAACGATGCTCGGGTG
CTCTCTTGTCTCGCAGTGAACGATTAATGCGACAGGCAACGAGTGTCAGC
CGAGACACTTTGCTCTCGCTGGGCACCTGCTTCGGAAAGTTCACGAAATC
GGGCAAGTTTCGACTGCACATCACGGCCCTCGACTACATTTCGCAGTATG
CCAAGGTGATTGTAGTTGATTCTACTGCTGTACTAGTAGCTCTCCACAAA
ACCAACGGCGCCCACGAAACTTTTTCTTTAGTAAAAGTAGAAAAGTAAAA
TAAAACGTCAGATGTGTTTTTTACTTGGTTAGCCTCACGACGTTTCAAAG
GCTGATATGGTACAGGCGCAATGGAATGGTCGCTTTTGTTCACGTTGCGC
CTCGCAGCAGGATACTCTGAGCCGAAGTTGTGTTACCTGGTACGTAGTAC
CTGCTGTTCATCCCAATCCGCTGTCCCCTTCTGTGAACGCTCTGAACTCT
GGAACACAACAATCCTGGTGCGCTTAACAAGCGTTGGTGGTTGTTCGTTG
TGTTTGTTTCTTAGTTCGGTCACGATGGCGCATTATTACTTGTAAGCAGC
ATAGCAGACTTGACTGCAGCCGCCAACAATGACATGCGACAGTAAAAGCT
AGTATGCGCTCGCCTTGCAAGTGTCTCTGGTCGCATTCAAATTGACCGTT
GCGTTATCTTTATTCGTACGTTTTCTTCTAGACCGCTTTGTCGTAGACCT
TTCACATGTATAGCACTAAACTTGAGATTTTCATTAGAACGGAACTGCAC
GCAACCTGAGCCGTACGCTTAGTTTTTTCACGGCGCATGGTACGTACGTG
GCGTCAACCGCCGTGCGTTGGCCCAACCGCCATGAAGGTGGCACCGCCCT
TCCCCTTCCTATTCCAAACCCAATATTTCTACGACGGCGCTGTCCACCCT
CCCAGCACGCCAAAATAGGTCGCCTTCTCTCTCTCTTTTCTTTCCCCCTT
TCTGTCTCTACTGCAGCACTTACCCCCGAGTCTTTTGCCCCTCCACCCAC
ACGGTTTATTTTCCCTCCTCCTCGCCCCCCTCGCCTGCCGCGAAAACGCA
GTACAAGGTGTGGGTAAAACCCAGCGCGGAGATGTCCTTTTTGTACGGCA
ACCACGTGCAGAAGTCCGGCCTGGGGCGAATAACGGAGAGCACTCCCAAG
TACGGGGGCGCCGTTGTATATAGCATGAGCGACGTGCCGCTCGGCTTCGG
CGTGGCGGCGCAGCCGACCGAGTACTGCAAAGATCTCGACCCCACCGCGG
TGGTCGTGCTTCACCAAGCGGACGTTGGCGAATACTTGCGGGTGGAGGAC
GACCTTCTGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1208:8749..14460-

>mRNA_M-pyrifera_M_contig1208.4280.1 ID=mRNA_M-pyrifera_M_contig1208.4280.1|Name=mRNA_M-pyrifera_M_contig1208.4280.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig1208:8749..14460- (Macrocystis pyrifera P11B4 male)
ATGAGACCGCTCACAGACGATGAGACAAAGGTGCTGTTCGAGAAGTTGGC
CAACTACATCGGGAAGAACATTGAGCAGCTCATCAACCGCCCGGACGAGA
AGTGTTGCTTTCGATTGCACAAGGACCGGGTCTACTACGTCAGATGAGAC
CGCTCACAGACGATGAGACAAAGGTGCTGTTCGAGAAGTTGGCCAACTAC
ATCGGGAAGAACATTGAGCAGCTCATCAACCGCCCGGACGAGAAGTGTTG
CTTTCGATTGCACAAGGACCGGGTCTACTACGTCAGTGAACGATTAATGC
GACAGGCAACGAGTGTCAGCCGAGACACTTTGCTCTCGCTGGGCACCTGC
TTCGGAAAGTTCACGAAATCGGGCAAGTTTCGACTGCACATCACGGCCCT
CGACTACATTTCGCAGTATGCCAAGTGAACGATTAATGCGACAGGCAACG
AGTGTCAGCCGAGACACTTTGCTCTCGCTGGGCACCTGCTTCGGAAAGTT
CACGAAATCGGGCAAGTTTCGACTGCACATCACGGCCCTCGACTACATTT
CGCAGTATGCCAAGTACAAGGTGTGGGTAAAACCCAGCGCGGAGATGTCC
TTTTTGTACGGCAACCACGTGCAGAAGTCCGGCCTGGGGCGAATAACGGA
GAGCACTCCCAAGTACGGGGGCGCCGTTGTATATAGCATGAGCGACGTGC
CGCTCGGCTTCGGCGTGGCGGCGCAGCCGACCGAGTACTGCAAAGATCTC
GACCCCACCGCGGTGGTCGTGCTTCACCAAGCGGACGTTGGCGAATACTT
GCGGGTGGAGGACGACCTTCTGTAGTACAAGGTGTGGGTAAAACCCAGCG
CGGAGATGTCCTTTTTGTACGGCAACCACGTGCAGAAGTCCGGCCTGGGG
CGAATAACGGAGAGCACTCCCAAGTACGGGGGCGCCGTTGTATATAGCAT
GAGCGACGTGCCGCTCGGCTTCGGCGTGGCGGCGCAGCCGACCGAGTACT
GCAAAGATCTCGACCCCACCGCGGTGGTCGTGCTTCACCAAGCGGACGTT
GGCGAATACTTGCGGGTGGAGGACGACCTTCTGTAG
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