prot_M-pyrifera_M_contig1208.4280.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1208.4280.1
Unique Nameprot_M-pyrifera_M_contig1208.4280.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length181
Homology
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: D8LBD3_ECTSI (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD3_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 2.080e-127
Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDLL 180
            MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITE+TPKYGGAVVYSMSDVPLGFGVAAQPTE+CKDLDPTAVVVLHQADVGEYLRVEDDLL
Sbjct:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEFCKDLDPTAVVVLHQADVGEYLRVEDDLL 180          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A835ZB99_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB99_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.920e-105
Identity = 148/178 (83.15%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDD 178
            MRPLTD+ET  LFEKLANYIGK+IE+LINRPDE  CFRLHKDRVYYVSERLMRQ+T+VSRD LLSLGTCFGKFTK+ KFRL IT LDYISQYAK+KVWVKP AEMSFLYGNHV KSGL RITE+TP+Y G VVYSM+D+P+GFGVAAQ TEYC+DLD  AVVVLHQAD+GEYLRVEDD
Sbjct:    1 MRPLTDEETATLFEKLANYIGKDIEKLINRPDEAYCFRLHKDRVYYVSERLMRQSTNVSRDNLLSLGTCFGKFTKTKKFRLGITCLDYISQYAKHKVWVKPGAEMSFLYGNHVAKSGLARITEATPQYAGVVVYSMNDIPMGFGVAAQATEYCRDLDAAAVVVLHQADIGEYLRVEDD 178          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A7S2S5A9_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5A9_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.560e-95
Identity = 136/180 (75.56%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDL 179
            MRPLT+DETK+LF+KLA YIGK+IEQ+INR DE+ CFRL KDRVYYVSE  M+ + S+SRD +L  GTC GKF+KSGKFRLH+TALDY+SQYAKYKVWVKPSAEMSFLYGN++ KSGL RITESTP+Y G VVY+MSD+PLGFGV+AQ TE CKDL+P   VVLHQAD+GEYLR VEDD+
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGKSIEQMINRKDERHCFRLMKDRVYYVSESAMKYSASISRDNILHFGTCLGKFSKSGKFRLHVTALDYLSQYAKYKVWVKPSAEMSFLYGNNILKSGLARITESTPQYAGVVVYNMSDLPLGFGVSAQNTEACKDLEPMGNVVLHQADIGEYLRGVEDDM 180          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: B5Y3S4_PHATC (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3S4_PHATC)

HSP 1 Score: 281 bits (718), Expect = 1.820e-94
Identity = 134/180 (74.44%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDL 179
            MRPLT++ETK LF KL+ YIGKNIE+LINR DE+ CFRL KDR YY+SE +M+ ATS+ R+ LL +GTC GKFTK+GKFRLHITAL+YISQYAKYKVWVKPSAEMSFLYGNHV K+GL R+TE+TP+Y G VVYSMSD+PLGFGVAAQ TE+C+ LDPT  VVLHQAD+GEYLR +E+D+
Sbjct:    1 MRPLTEEETKSLFLKLSEYIGKNIERLINRSDERHCFRLIKDRCYYISESIMKSATSIGREHLLHVGTCMGKFTKTGKFRLHITALEYISQYAKYKVWVKPSAEMSFLYGNHVSKNGLARMTENTPQYSGVVVYSMSDIPLGFGVAAQSTEHCQQLDPTGNVVLHQADIGEYLRGLEEDM 180          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A6I9Z2T1_9SAUR (60S ribosome subunit biogenesis protein NIP7 homolog n=21 Tax=Sauria TaxID=32561 RepID=A0A6I9Z2T1_9SAUR)

HSP 1 Score: 278 bits (710), Expect = 2.900e-93
Identity = 129/179 (72.07%), Postives = 157/179 (87.71%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 179
            MRPLT+DET+VLFEKLA Y+G+NI+ L++RPD   CFRLHKDRVYY+SERL++ AT++ RD+L+SLGTCFGKFTK+ KFRLHITALDY++ YAKYKVWVKP AE SFLYGNH+ KSGLGRITEST +Y G VVYSM+DVPLGFGVAA+ T+ C+ +DP A+VV HQAD+GEY+R E+ L
Sbjct:    1 MRPLTEDETRVLFEKLARYVGENIQLLVDRPDGTYCFRLHKDRVYYLSERLLKLATNIPRDSLVSLGTCFGKFTKTQKFRLHITALDYLAPYAKYKVWVKPGAEQSFLYGNHLLKSGLGRITESTAQYQGVVVYSMADVPLGFGVAAKTTQECRKVDPMAIVVFHQADIGEYIRHEETL 179          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A7S3PW11_9STRA (60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW11_9STRA)

HSP 1 Score: 277 bits (708), Expect = 6.270e-93
Identity = 136/181 (75.14%), Postives = 160/181 (88.40%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLH-KDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLR-VEDDL 179
            MRPLT+DETK+LF+KLA YIG++IE++INR DE+ CFRL  K+RVYYVSE +M+ + SV+RD LLS GTC GKFTKSGKFRLHITALDY+SQYA+YKVWVKPSAEMSFLYGN+V KSGL RITESTP+Y G VVYSMSD+PLGFGVA+Q T+ CKDL+P   VVLHQAD+GEYLR +EDD+
Sbjct:    1 MRPLTEDETKLLFQKLAEYIGRSIEKMINRSDERHCFRLAAKNRVYYVSESVMKASNSVARDNLLSFGTCLGKFTKSGKFRLHITALDYLSQYAQYKVWVKPSAEMSFLYGNNVLKSGLARITESTPQYAGIVVYSMSDIPLGFGVASQGTDACKDLEPMGNVVLHQADIGEYLRGMEDDI 181          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: NIP7_XENTR (60S ribosome subunit biogenesis protein NIP7 homolog n=13 Tax=Sarcopterygii TaxID=8287 RepID=NIP7_XENTR)

HSP 1 Score: 276 bits (706), Expect = 1.180e-92
Identity = 128/179 (71.51%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 179
            MRPLTD+ETK +FEKL+ YIG+NI+ L++RPD   CFRLH DRVYYVSER+++ AT+++RD L+SLGTCFGKFTK+ KFRLH+TALDY++ YAKYKVWVKP AE SFLYGNHV KSGLGRITE+T +Y G VVYSM+D+PLGFGVAA+ T+ C+ LDP A+VV HQADVGEY+R ED L
Sbjct:    1 MRPLTDEETKAMFEKLSKYIGENIKLLVDRPDGTYCFRLHNDRVYYVSERILKLATNIARDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEYIRHEDTL 179          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A8C4T854_ERPCA (60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T854_ERPCA)

HSP 1 Score: 275 bits (704), Expect = 2.380e-92
Identity = 128/179 (71.51%), Postives = 156/179 (87.15%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 179
            MRPLTD+ETK LFEK++ YIG+NI+ L++RPD   CFRLHKDRVYY+SE+L++ +T++SRD L+S+GTCFGKFTK+ KFRLH+TALDY++ YAKYKVWVKP AE SFLYGNHV KSGLGRITE+T +Y G VVYSM+DVPLGFGVAA+ T+ C+ LDP A+VV HQAD+GEYLR ED L
Sbjct:    1 MRPLTDEETKALFEKVSKYIGENIKLLVDRPDGVYCFRLHKDRVYYLSEKLLKLSTNISRDKLISVGTCFGKFTKTMKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKLDPMAIVVFHQADIGEYLRSEDTL 179          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A1Y1VL50_9FUNG (60S ribosome subunit biogenesis protein NIP7 n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VL50_9FUNG)

HSP 1 Score: 275 bits (703), Expect = 3.380e-92
Identity = 125/180 (69.44%), Postives = 154/180 (85.56%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDLL 180
            MRPLT++ETKV F+KLA YIG+NI  LINRPD+  CFRLH +RVYYVSE++M++AT + RD LLSLG CFGKFTK+GKFRLHIT+LDY++QYAKYK+WVKP+ EM F+YGNHV K+ LGRITE TP++ GA++YSM+DVPLGFGV A+ T  C+ LDPT +VV HQAD+GEYLR E+ LL
Sbjct:    1 MRPLTEEETKVFFQKLAQYIGRNIVHLINRPDDTYCFRLHNNRVYYVSEKIMKKATCIGRDQLLSLGVCFGKFTKTGKFRLHITSLDYLAQYAKYKIWVKPNGEMPFMYGNHVLKAHLGRITEDTPEHQGAIIYSMNDVPLGFGVTARSTSDCRKLDPTGIVVFHQADIGEYLRGEETLL 180          
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Match: A0A401NXV3_SCYTO (60S ribosome subunit biogenesis protein NIP7 homolog n=8 Tax=Gnathostomata TaxID=7776 RepID=A0A401NXV3_SCYTO)

HSP 1 Score: 275 bits (702), Expect = 4.800e-92
Identity = 129/179 (72.07%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPTEYCKDLDPTAVVVLHQADVGEYLRVEDDL 179
            MRPLT++ET++LFEKLA YIG+NI+ L+ RPD   CFRLHKDRVYYVSE++++ AT++SRD L+SLGTCFGKFTK+ KFRLHITALDY++ YAKYKVWVKP  E SFLYGNHV KSGLGRITEST +Y G VVYSM+D+PLGFGVAA+ T+ C+ +DP A+VV HQADVGEY+R ED L
Sbjct:    1 MRPLTEEETRLLFEKLAKYIGENIKLLVERPDGTYCFRLHKDRVYYVSEKILKLATNISRDKLVSLGTCFGKFTKTLKFRLHITALDYLAPYAKYKVWVKPGTEQSFLYGNHVLKSGLGRITESTAQYQGVVVYSMADIPLGFGVAAKSTQDCRRVDPMAIVVFHQADVGEYIRNEDTL 179          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1208.4280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD3_ECTSI2.080e-12798.8960S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A835ZB99_9STRA3.920e-10583.1560S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A7S2S5A9_9STRA1.560e-9575.5660S ribosome subunit biogenesis protein NIP7 homol... [more]
B5Y3S4_PHATC1.820e-9474.4460S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A6I9Z2T1_9SAUR2.900e-9372.0760S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A7S3PW11_9STRA6.270e-9375.1460S ribosome subunit biogenesis protein NIP7 homol... [more]
NIP7_XENTR1.180e-9271.5160S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A8C4T854_ERPCA2.380e-9271.5160S ribosome subunit biogenesis protein NIP7 homol... [more]
A0A1Y1VL50_9FUNG3.380e-9269.4460S ribosome subunit biogenesis protein NIP7 n=3 T... [more]
A0A401NXV3_SCYTO4.800e-9272.0760S ribosome subunit biogenesis protein NIP7 homol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002478PUA domainSMARTSM00359pua_5coord: 95..170
e-value: 3.2E-8
score: 43.3
IPR002478PUA domainPROSITEPS50890PUAcoord: 94..170
score: 11.365
IPR005155UPF0113, PUA domainPFAMPF03657UPF0113coord: 96..174
e-value: 2.0E-22
score: 79.3
NoneNo IPR availableGENE3D3.10.450.220coord: 1..93
e-value: 3.8E-44
score: 150.5
NoneNo IPR availablePANTHERPTHR23415CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7coord: 1..179
NoneNo IPR availablePANTHERPTHR23415:SF460S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 HOMOLOGcoord: 1..179
NoneNo IPR availableSUPERFAMILY88802Pre-PUA domaincoord: 1..94
IPR036974PUA domain superfamilyGENE3D2.30.130.10coord: 94..180
e-value: 7.8E-41
score: 139.9
IPR040598UPF0113, pre-PUA domainPFAMPF17833UPF0113_Ncoord: 2..83
e-value: 7.9E-34
score: 116.1
IPR016686Ribosome biogenesis factor, NIP7PIRSFPIRSF017190NIP7coord: 1..180
e-value: 1.8E-85
score: 282.9
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 95..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1208contigM-pyrifera_M_contig1208:8749..14460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1208.4280.1mRNA_M-pyrifera_M_contig1208.4280.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1208 8749..14460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1208.4280.1 ID=prot_M-pyrifera_M_contig1208.4280.1|Name=mRNA_M-pyrifera_M_contig1208.4280.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSER
LMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVK
PSAEMSFLYGNHVQKSGLGRITESTPKYGGAVVYSMSDVPLGFGVAAQPT
EYCKDLDPTAVVVLHQADVGEYLRVEDDLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR005155UPF0113_PUA
IPR036974PUA_sf
IPR040598UPF0113_N
IPR016686Ribosomal_synth_fac_NIP7
IPR015947PUA-like_sf