mRNA_M-pyrifera_M_contig120216.4171.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: W1PK22_AMBTC (Uncharacterized protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PK22_AMBTC) HSP 1 Score: 81.6 bits (200), Expect = 2.260e-15 Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 13 HVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDARIHYLTVQE-GGNVIYFCTTAGEFVRTDIR 396
+V RL+P RI+S AF P V GGK GH+G W E D + PH+AP+SG+V+ P T+IFT+SYD +R+M+ E+G + + I L+ + N +YF GEF D R
Sbjct: 230 NVARLVPGRIFSLAFFPFCERSVVVAGGKFGHVGIWDTDQKEED---GVHSYCPHSAPVSGVVVWPFHLTKIFTSSYDGFIRLMNVEEGKFDMVYNCNDEIFALSARTCDSNSLYFAEGQGEFKVWDER 355
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: A0A5P1FPK5_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FPK5_ASPOF) HSP 1 Score: 74.7 bits (182), Expect = 5.350e-13 Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 22 RLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKG-----TSSEIAI-----WDARIHYLTVQEGGNVI 351
+++ RI S F P V VG K G+LG W E D G V+ PH+ P+SGI + P P +IFT+SYD +R+MD EKG TSS+ A W ++ L + EGG ++
Sbjct: 31 KVVSERIMSVRFLPFVDRTVVVVGNKIGNLGFWDLDFGEGD-GGGIYVYHPHSGPVSGISVHPFSPRKIFTSSYDGFVRLMDVEKGSFNMLTSSDDAFFSICQWPEDVNSLYIGEGGGML 149
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: UPI0009012F95 (WD repeat-containing protein 76 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009012F95) HSP 1 Score: 74.3 bits (181), Expect = 8.620e-13 Identity = 42/129 (32.56%), Postives = 71/129 (55.04%), Query Frame = 1
Query: 13 HVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDARIHYLTVQ-EGGNVIYFCTTAGEFVRTDIR 396
++ R++P RI + F P++G + VG K G++G W E D +G ++QPH+AP+SGIVI +++T YD +R+MD EK + D I+ L+ + + N +Y+ G+ D+R
Sbjct: 183 NIARVVPGRILNVKFFPTTGMRMVAVGNKFGNIGFWNADAKEEDGDGIY-LYQPHSAPVSGIVIESFSMPKMYTCCYDGFIRLMDIEKELFDSLYFSDHSIYALSQRPDDMNSLYYAEGNGKLGIWDLR 310
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: UPI000867404F (WD40 repeat-like protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867404F) HSP 1 Score: 72.8 bits (177), Expect = 3.030e-12 Identity = 47/145 (32.41%), Postives = 65/145 (44.83%), Query Frame = 1
Query: 19 VRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAW----RPALAESDPEGACSV-----FQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDAR--------IHYLTVQEGGNVIYFCTTAGEFVRTDIREP 402
+R+ P RIY HP S + G K G LG W + AE D E A + F+PHN +S P+ +++TTSYD +R++D + G S+EI I + GNV+Y AG R D R P
Sbjct: 179 IRITPERIYHIGMHPDSTRKLVLAGDKTGVLGIWDADSKREAAEEDEEDAAELPLIHQFRPHNRTISSFAFSPTNAQKLYTTSYDASVRLLDLQAGISNEIFAPGKDEDEDEAPLISACEITPEGNVVYISDFAGRVHRYDTRAP 323
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: A0A0E9NEF7_SAICN (Acyl-CoA oxidase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NEF7_SAICN) HSP 1 Score: 72.8 bits (177), Expect = 3.420e-12 Identity = 47/145 (32.41%), Postives = 65/145 (44.83%), Query Frame = 1
Query: 19 VRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAW----RPALAESDPEGACSV-----FQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDAR--------IHYLTVQEGGNVIYFCTTAGEFVRTDIREP 402
+R+ P RIY HP S + G K G LG W + AE D E A + F+PHN +S P+ +++TTSYD +R++D + G S+EI I + GNV+Y AG R D R P
Sbjct: 179 IRITPERIYHIGMHPDSTRKLVLAGDKTGVLGIWDADSKREAAEEDEEDAAELPLIHQFRPHNRTISSFAFSPTNAQKLYTTSYDASVRLLDLQAGISNEIFAPGKDEDEDEAPLISACEITPEGNVVYISDFAGRVHRYDTRAP 323
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: A0A7S1J3R6_9EUGL (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J3R6_9EUGL) HSP 1 Score: 72.4 bits (176), Expect = 4.200e-12 Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 16 VVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWR-PALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDARIH----YLTVQEGG-NVIYFCTTAGEFVRTDIRE 399
V +++P RIYS AFHPS+ ++ G K G+LG W A AE DP +++PH + + + P +++ T SYD +R MD KG + + + + H + + EG N +Y T+ G+ + D R+
Sbjct: 253 VAKVVPERIYSCAFHPSTSKLLVAAGDKQGNLGLWNVDAAAEVDP---VFLYKPHGSVIGALQYKPDDSSKLVTWSYDGTVRCMDVVKGEFARMFVVNEDEHGWVQHGCLSEGDPNAMYVATSQGKVMAVDWRQ 383
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: UPI0009BE7A90 (WD repeat-containing protein 76 isoform X2 n=3 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BE7A90) HSP 1 Score: 70.5 bits (171), Expect = 1.910e-11 Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 1
Query: 13 HVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDARIHYLTVQEGG-NVIYFCTTAGEFVRTDIR 396
+V RL+P RI S F P V G K G++G W E D + PH+A +SG+V+ P T+IFT+SYD +R+M+ E G I D + L+ Q N +YF GE D R
Sbjct: 200 NVARLVPGRILSLGFFPCLERTVVVAGDKLGYVGFWDTDDKEGD---GVYTYCPHSAAVSGVVVRPFHLTKIFTSSYDGSIRLMNVEDGNFDMIYHCDDEVFALSTQTCDMNSLYFAEGQGELKVWDER 325
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: W1PSU1_AMBTC (Uncharacterized protein n=4 Tax=Amborella trichopoda TaxID=13333 RepID=W1PSU1_AMBTC) HSP 1 Score: 70.5 bits (171), Expect = 1.910e-11 Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 1
Query: 13 HVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDARIHYLTVQEGG-NVIYFCTTAGEFVRTDIR 396
+V RL+P RI S F P V G K G++G W E D + PH+A +SG+V+ P T+IFT+SYD +R+M+ E G I D + L+ Q N +YF GE D R
Sbjct: 200 NVARLVPGRILSLGFFPCLERTVVVAGDKLGYVGFWDTDDKEGD---GVYTYCPHSAAVSGVVVRPFHLTKIFTSSYDGSIRLMNVEDGNFDMIYHCDDEVFALSTQTCDMNSLYFAEGQGELKVWDER 325
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: A0A0B6Z6H8_9EUPU (WD repeat-containing protein 76 (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Z6H8_9EUPU) HSP 1 Score: 68.2 bits (165), Expect = 2.180e-11 Identity = 30/91 (32.97%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 4 SDAHVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEK 276
+D V +++P R +S A+HPSS +++ G K+G++G W +ES + F+ H P+S + +PP+ P ++++ SYD LR + E+
Sbjct: 99 TDNRVAKVVPGRAFSLAWHPSSQSLISVAGDKNGYIGIWDVTASESTGQDIVRAFRCHIKPVSDLFVPPADPHKLYSCSYDSTLRCGNFER 189
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Match: I1MTX8_SOYBN (Uncharacterized protein n=7 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1MTX8_SOYBN) HSP 1 Score: 69.7 bits (169), Expect = 3.480e-11 Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = 1
Query: 13 HVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEGACSVFQPHNAPLSGIVIPPSQPTRIFTTSYDMCLRMMDAEKGTSSEIAIWDARIHYLTVQEGG-NVIYFCTTAGEFVRTDIREPLRST 414
++ R++P RI S F PSS + VG K G++G W +E +++PH AP+SGI+I P ++I+T+ YD LR+MD EK + D I+ L++ N +Y G D R RS+
Sbjct: 157 NIARVVPGRITSLRFFPSSSVKMVAVGNKFGNVGFWNVGGSE------VHLYRPHRAPISGILIQPHCFSKIYTSCYDGILRLMDVEKEIFDLVFECDESIYALSLPTNETNCLYLAEGYGGLTIWDNRIGKRSS 285 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120216.4171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120216.4171.1 >prot_M-pyrifera_M_contig120216.4171.1 ID=prot_M-pyrifera_M_contig120216.4171.1|Name=mRNA_M-pyrifera_M_contig120216.4171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp ASDAHVVRLIPSRIYSAAFHPSSGPVVAWVGGKHGHLGAWRPALAESDPEback to top mRNA from alignment at M-pyrifera_M_contig120216:62..484- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120216.4171.1 ID=mRNA_M-pyrifera_M_contig120216.4171.1|Name=mRNA_M-pyrifera_M_contig120216.4171.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig120216:62..484- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120216:62..484- >mRNA_M-pyrifera_M_contig120216.4171.1 ID=mRNA_M-pyrifera_M_contig120216.4171.1|Name=mRNA_M-pyrifera_M_contig120216.4171.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig120216:62..484- (Macrocystis pyrifera P11B4 male)back to top |