mRNA_M-pyrifera_M_contig120064.4143.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: A0A518IT16_9BACT (DNA primase TraC n=1 Tax=Rosistilla oblonga TaxID=2527990 RepID=A0A518IT16_9BACT) HSP 1 Score: 131 bits (329), Expect = 5.500e-36 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDET 195
VAEIG+CFLMGELQMPT ENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDET
Sbjct: 228 VAEIGACFLMGELQMPTMENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDET 292
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: A0A2G1W715_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula bahusiensis TaxID=2014065 RepID=A0A2G1W715_9BACT) HSP 1 Score: 130 bits (326), Expect = 1.540e-35 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDET 195
VAEIG+CFLMGEL MPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSR+DET
Sbjct: 228 VAEIGACFLMGELNMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRQDET 292
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: UPI00118B282D (zincin-like metallopeptidase domain-containing protein n=1 Tax=Symmachiella dynata TaxID=2527995 RepID=UPI00118B282D) HSP 1 Score: 106 bits (265), Expect = 1.690e-26 Identity = 46/64 (71.88%), Postives = 58/64 (90.62%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDE 192
+AEIGSCF+MGEL +PT +N++NHAAY+KSWLKGM+DDPKFIFRAAAQ++KA D++L FSR E
Sbjct: 227 IAEIGSCFMMGELGLPTADNMDNHAAYVKSWLKGMSDDPKFIFRAAAQATKAVDFLLDFSRNAE 290
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: UPI001E601EE2 (zincin-like metallopeptidase domain-containing protein n=1 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E601EE2) HSP 1 Score: 106 bits (264), Expect = 2.640e-26 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDE 192
VAEIGSCFLM EL M TTENL+NHAAY+KSWL M DDPKFIFRA+AQ+SKA DYILSFSR E
Sbjct: 228 VAEIGSCFLMNELGMATTENLDNHAAYVKSWLNAMADDPKFIFRASAQASKAADYILSFSRNTE 291
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: A0A518CMM9_9PLAN (DNA primase TraC n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CMM9_9PLAN) HSP 1 Score: 90.9 bits (224), Expect = 1.520e-20 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRK 186
+AE+G+CFLMGEL++P EN+ NHAAYL WLK M DPKFIF A++Q+SKA DY+LS+S +
Sbjct: 225 IAELGACFLMGELEIPFAENISNHAAYLDGWLKKMKGDPKFIFDASSQASKAVDYLLSYSEQ 286
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: UPI0014205A8C (zincin-like metallopeptidase domain-containing protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014205A8C) HSP 1 Score: 88.6 bits (218), Expect = 1.360e-19 Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRKDE 192
VAE+GSCFLMGEL +PTT+NL++HAAY+ +WLK M D +FIF+AAA +SKA D++LS R+ E
Sbjct: 230 VAELGSCFLMGELGLPTTDNLDSHAAYVGNWLKAMKGDTRFIFKAAATASKAVDFLLSNVRQPE 293
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: A0A2S8F619_9BACT (Uncharacterized protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8F619_9BACT) HSP 1 Score: 88.2 bits (217), Expect = 2.190e-19 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRK 186
+AEIG+C+L GEL +P + +ENHA+YLKSWL M D FIFRA +Q+SKATDYILSFS++
Sbjct: 243 IAEIGACYLCGELGVPMADRIENHASYLKSWLSAMKQDAGFIFRATSQASKATDYILSFSQE 304
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: A0A142YME4_9PLAN (DNA primase TraC n=1 Tax=Planctomyces sp. SH-PL62 TaxID=1636152 RepID=A0A142YME4_9PLAN) HSP 1 Score: 87.0 bits (214), Expect = 5.870e-19 Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSR 183
VAEIG+C+L EL +P + NL+NH AYL +WL+ M DDP+FIF A+AQ+SKA DY+L+FSR
Sbjct: 240 VAEIGACYLARELGVPASGNLDNHVAYLANWLRAMKDDPRFIFTASAQASKAADYLLAFSR 300
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: A0A5C6E392_9BACT (DNA primase TraC n=1 Tax=Novipirellula artificiosorum TaxID=2528016 RepID=A0A5C6E392_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 1.290e-17 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 4 AEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFSRK 186
AEIG+C LM EL +P +NL+NHA+YL+ WL+ + +DP FIF +AQS+KA DY+LSFS++
Sbjct: 224 AEIGACLLMAELGLPVAQNLDNHASYLQHWLRQLREDPNFIFFVSAQSNKAVDYLLSFSKQ 284
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Match: UPI00142211CC (zincin-like metallopeptidase domain-containing protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00142211CC) HSP 1 Score: 82.0 bits (201), Expect = 3.590e-17 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 VAEIGSCFLMGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSF 177
VAE+ SCFL EL +P E LENHAAYLKSWL M DD FIF+AA Q+SK D++LSF
Sbjct: 231 VAEMASCFLATELGVPQGEGLENHAAYLKSWLSSMKDDASFIFKAATQASKTADFLLSF 289 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120064.4143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120064.4143.1 >prot_M-pyrifera_M_contig120064.4143.1 ID=prot_M-pyrifera_M_contig120064.4143.1|Name=mRNA_M-pyrifera_M_contig120064.4143.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp MGELQMPTTENLENHAAYLKSWLKGMNDDPKFIFRAAAQSSKATDYILSFback to top mRNA from alignment at M-pyrifera_M_contig120064:277..471- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120064.4143.1 ID=mRNA_M-pyrifera_M_contig120064.4143.1|Name=mRNA_M-pyrifera_M_contig120064.4143.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=195bp|location=Sequence derived from alignment at M-pyrifera_M_contig120064:277..471- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120064:277..471- >mRNA_M-pyrifera_M_contig120064.4143.1 ID=mRNA_M-pyrifera_M_contig120064.4143.1|Name=mRNA_M-pyrifera_M_contig120064.4143.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig120064:277..471- (Macrocystis pyrifera P11B4 male)back to top |