mRNA_M-pyrifera_M_contig119824.4078.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A7S2AR26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AR26_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.700e-48 Identity = 78/105 (74.29%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L+KLNE G+G+EGSGL LDLVYNPLGAFLPPPQ L +YK EL + FGI FN LFTMTNMPIKRFAD L+RRGELK+Y+DLLVRNFN DTV LMC N +NV W
Sbjct: 177 LLKLNEAGYGKEGSGLVLDLVYNPLGAFLPPPQAPLTEKYKQELMDVFGIRFNELFTMTNMPIKRFADLLYRRGELKDYMDLLVRNFNPDTVSNLMCTNTLNVRW 281
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A7S2WVW2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVW2_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.210e-47 Identity = 74/105 (70.48%), Postives = 92/105 (87.62%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L++LN+RG+G+EGSGL LDLVYNP+GAFLPPPQE L +YK EL +AFGI+FN LFT+TNMPIKRFADFL+RRGELK+Y++LLVRNFN TV+ +MC + V+V W
Sbjct: 254 LLRLNDRGYGKEGSGLFLDLVYNPIGAFLPPPQEALEAKYKEELMDAFGIEFNGLFTITNMPIKRFADFLYRRGELKDYMELLVRNFNPSTVDSVMCTSTVSVGW 358
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A8J1YD72_OWEFU (Ofus.G25393 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1YD72_OWEFU) HSP 1 Score: 164 bits (414), Expect = 1.370e-46 Identity = 75/105 (71.43%), Postives = 89/105 (84.76%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L KLN GFG EGS L LDLVYNPLG +LPPPQEEL ++YK E+ E FG++FN LFTMTNMPIKRFADFL+RR EL+EYL+LLVRN+N T++ LMCRNH+NV+W
Sbjct: 286 LRKLNSLGFGVEGSDLHLDLVYNPLGNYLPPPQEELAHQYKTEMMENFGVEFNMLFTMTNMPIKRFADFLYRRNELQEYLELLVRNYNIATIDNLMCRNHLNVSW 390
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: F0XY08_AURAN (Selenoprotein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY08_AURAN) HSP 1 Score: 163 bits (412), Expect = 3.460e-46 Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = 1
Query: 10 LNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
LNE G+G EGS L +DLVYNPLGAFLPPPQE L +Y+ ELK FG+DF+ LFTMTNMPIKRFADFL RRGELK+YLDLLVRNFN DTV+ LMCRN ++V+W
Sbjct: 297 LNEAGYGAEGSDLRMDLVYNPLGAFLPPPQEALEAKYREELKREFGVDFDELFTMTNMPIKRFADFLSRRGELKDYLDLLVRNFNPDTVDTLMCRNTLSVSW 398
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A7S1BVR4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVR4_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.260e-45 Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVA 312
L LNE G+G GSGL LDLVYNPLGAFLPP Q+ L ++Y+ EL + FGI FN+L+TMTNMPIKRFADFL+RRGEL+EY++LLVRNFN DT+EGLMCRN V+V
Sbjct: 165 LAMLNEAGYGTAGSGLVLDLVYNPLGAFLPPDQQMLEDKYREELLDNFGIQFNHLYTMTNMPIKRFADFLYRRGELQEYMELLVRNFNTDTIEGLMCRNTVSVG 268
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A6V1UUT3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UUT3_HETAK) HSP 1 Score: 160 bits (405), Expect = 4.050e-45 Identity = 75/105 (71.43%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L KLNE G+GREG+GL LDLVYNPLGAFLPPPQ L +Y+ EL E FGI+FN LFT++NMPIKRFADFL RRGEL+EY+ LLVR FN V+GLMCRNH++V W
Sbjct: 289 LRKLNELGYGREGTGLHLDLVYNPLGAFLPPPQAALEEKYREELMEHFGIEFNGLFTISNMPIKRFADFLHRRGELEEYMGLLVRTFNPAAVQGLMCRNHLSVRW 393
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A836C7A2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A2_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.580e-45 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L +LN G+G EGSGL LDLVYNPLGAFLPPPQE L +YK EL EAFGI FN+LFT+TNMPIKRFADFL+RRGELK+Y++LLVRNFN +GLMC++ V+V W
Sbjct: 257 LRQLNALGYGVEGSGLSLDLVYNPLGAFLPPPQEALEAKYKEELMEAFGITFNSLFTITNMPIKRFADFLYRRGELKDYMELLVRNFNPAATKGLMCKDTVSVGW 361
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A8B8ADA8_CRAVI (uncharacterized protein LOC111101300 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8ADA8_CRAVI) HSP 1 Score: 149 bits (376), Expect = 3.070e-44 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L K N G+ E SGL LDLVYNP+GAFLPPPQE L +Y+ EL E FGI FN LFT+TNMPIKRFADFL RR EL++YL+LLVRNFN TV+ +MCRN +NV W
Sbjct: 15 LRKFNSLGYADETSGLKLDLVYNPIGAFLPPPQEPLAEKYREELWEYFGIRFNQLFTITNMPIKRFADFLIRRNELEDYLELLVRNFNIHTVDNIMCRNLINVNW 119
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: UPI0018D6A746 (uncharacterized protein LOC119721737 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6A746) HSP 1 Score: 157 bits (398), Expect = 7.090e-44 Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L+ LN+ G+GR+ GL LDLVYNPLG FLPP Q EL +YK EL + FGI+FNNL+T+TNMPIKRFADFL+RR EL++Y+ LLVRNFN +VEGLMCRNH+NV W
Sbjct: 317 LLLLNQLGYGRQDGGLRLDLVYNPLGGFLPPSQAELEAKYKEELWDTFGIEFNNLYTITNMPIKRFADFLYRRNELEDYMQLLVRNFNPASVEGLMCRNHLNVNW 421
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Match: A0A7S4NJP5_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NJP5_9EUKA) HSP 1 Score: 155 bits (392), Expect = 2.570e-43 Identity = 74/105 (70.48%), Postives = 85/105 (80.95%), Query Frame = 1
Query: 1 LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIDFNNLFTMTNMPIKRFADFLWRRGELKEYLDLLVRNFNFDTVEGLMCRNHVNVAW 315
L KLNE G+G+ S L LDLVYNPLGAFLPPPQ L +YK EL E FGI FNNL T+TNMPIKRFADFL+RRGEL+EY++LLVRNFN T EGLMCR+ ++V W
Sbjct: 274 LQKLNEVGYGQPESDLKLDLVYNPLGAFLPPPQGPLEEKYKEELMEHFGIKFNNLLTITNMPIKRFADFLYRRGELEEYMELLVRNFNPSTTEGLMCRDTISVGW 378 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119824.4078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119824.4078.1 >prot_M-pyrifera_M_contig119824.4078.1 ID=prot_M-pyrifera_M_contig119824.4078.1|Name=mRNA_M-pyrifera_M_contig119824.4078.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp LIKLNERGFGREGSGLGLDLVYNPLGAFLPPPQEELHNRYKAELKEAFGIback to top mRNA from alignment at M-pyrifera_M_contig119824:6..542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119824.4078.1 ID=mRNA_M-pyrifera_M_contig119824.4078.1|Name=mRNA_M-pyrifera_M_contig119824.4078.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig119824:6..542- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119824:6..542- >mRNA_M-pyrifera_M_contig119824.4078.1 ID=mRNA_M-pyrifera_M_contig119824.4078.1|Name=mRNA_M-pyrifera_M_contig119824.4078.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig119824:6..542- (Macrocystis pyrifera P11B4 male)back to top |