mRNA_M-pyrifera_M_contig119426.4004.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A6T7WK53_9CRYP (CCT-eta n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7WK53_9CRYP) HSP 1 Score: 164 bits (415), Expect = 7.780e-46 Identity = 81/112 (72.32%), Postives = 97/112 (86.61%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLETAE 402
E RELL++CAAT++NSKLI KDFFAP+VVDAVL LD D L++IGVKK+PGG++EDS LV+GVAFKKTFSYAGFEQQPKK NPKI LN+ELELK+EK+NAE+RL+ E
Sbjct: 90 ERRELLIKCAATSLNSKLISHQKDFFAPIVVDAVLSLDEDLSLDMIGVKKIPGGALEDSFLVKGVAFKKTFSYAGFEQQPKKFKNPKICLLNIELELKSEKENAEIRLDDPE 201
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A2P6N9U7_9EUKA (CCT-eta n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N9U7_9EUKA) HSP 1 Score: 162 bits (411), Expect = 8.030e-45 Identity = 82/112 (73.21%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLETAE 402
E R+LL +CAATA+NSKL+ SH+DFFA +VVDAV LD D LNLIG+KK GGS+ DS LV+GVAFKKTFSYAGFEQQPKK VNPKIIALN+ELELK+EK+NAE+R+E E
Sbjct: 155 EKRQLLEKCAATALNSKLVSSHRDFFAKMVVDAVFHLDDDLTLNLIGIKKENGGSLGDSYLVDGVAFKKTFSYAGFEQQPKKFVNPKIIALNIELELKSEKENAEIRIENPE 266
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A367IIB2_RHIST (T-complex protein 1 subunit eta (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IIB2_RHIST) HSP 1 Score: 155 bits (393), Expect = 3.900e-44 Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLN--LIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLETAED 405
E R+LL +CAATAMNSKLI S KDFF +VVDAVL LD + LN LIG+K+VPGG+M+DSVLV GVAFKKTFSYAGFEQQPK NPKI+ LN+ELELKAEKDNAEVR+E D
Sbjct: 1 EFRDLLSKCAATAMNSKLIYSQKDFFTKMVVDAVLSLD-QESLNERLIGIKRVPGGAMQDSVLVNGVAFKKTFSYAGFEQQPKSFKNPKILCLNVELELKAEKDNAEVRVEQVSD 114
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A192ZHV3_9EUKA (CCT-eta n=1 Tax=Stygiella incarcerata TaxID=1712417 RepID=A0A192ZHV3_9EUKA) HSP 1 Score: 160 bits (405), Expect = 5.890e-44 Identity = 84/131 (64.12%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 1 KSETYALSFLALPRTG-ADLLLSETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRL 390
K+ +++LS+L AD E R++LV CA T +NSKLI HKDFFA + VDAV+ LD D +++LIGVKKVPGGSM+DS LV+GVAFKKTFSYAGFEQQ KK VNPKI+ LN+ELELKAE++NAE+RL
Sbjct: 128 KALSFSLSYLETHSISIADKKKEELRKVLVNCARTTLNSKLISGHKDFFAEMAVDAVMALDEDLNMDLIGVKKVPGGSMQDSFLVDGVAFKKTFSYAGFEQQKKKFVNPKILLLNVELELKAERENAEIRL 258
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A699L2M8_TANCI (T-complex protein 1 subunit eta (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699L2M8_TANCI) HSP 1 Score: 154 bits (389), Expect = 8.340e-44 Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRL 390
E R LL +CAAT ++SKLIG KDFFA +VVDAV+ + D LN+IG+KKVPGG+M DS LV GVAFKKTFSYAGFEQQPKK NPKI+ LN+ELELK+EK+NAE+RL
Sbjct: 61 EKRSLLAKCAATTLSSKLIGGEKDFFATMVVDAVVAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRL 168
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: L8GWE7_ACACA (CCT-eta n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWE7_ACACA) HSP 1 Score: 159 bits (402), Expect = 1.270e-43 Identity = 81/114 (71.05%), Postives = 96/114 (84.21%), Query Frame = 1
Query: 64 SETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLETAED 405
+E R +L RCA TA+NSKLIGSH FF+ +VVDAV+ LD D +++LIG+KK GGSMEDS+L+EGVAFKK FSYAGFEQQPKKI NPKI+ LNLELELKAEKDNAE+R+E D
Sbjct: 153 TEMRTVLERCAGTALNSKLIGSHNAFFSKMVVDAVMHLDEDLNIDLIGIKKEKGGSMEDSLLIEGVAFKKCFSYAGFEQQPKKIPNPKILLLNLELELKAEKDNAELRIEDPAD 266
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A1R2CQ77_9CILI (CCT-eta n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CQ77_9CILI) HSP 1 Score: 158 bits (399), Expect = 1.910e-43 Identity = 78/113 (69.03%), Postives = 97/113 (85.84%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLETAED 405
E RELLV+CA T++NSKL+ S+K+FFA +VVDAV+KLD D + N+IG+K V GGS+ +S LV+GVAFKKTFSYAGFEQQPKK NPKI+ LNLELELK+EK+NAE+R+E ED
Sbjct: 105 EFRELLVKCAKTSLNSKLVASYKEFFAEIVVDAVMKLDADLEKNMIGIKHVQGGSVLNSFLVDGVAFKKTFSYAGFEQQPKKFENPKIVILNLELELKSEKENAEIRIENPED 217
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: UPI001C16611D (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C16611D) HSP 1 Score: 153 bits (387), Expect = 1.980e-43 Identity = 79/109 (72.48%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 73 RELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLN--LIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLE 393
R+LL +CA TAM+SKLI SH+DFF +VV+AVLKLD ++LN LIGVK++PGG+MEDS+LV+GVAFKKTFSYAGFEQQPK NPKI++LN+ELELKAEKDNAEVR++
Sbjct: 158 RDLLKKCAGTAMSSKLIHSHEDFFTDMVVNAVLKLD-QEELNEKLIGVKRIPGGAMEDSLLVDGVAFKKTFSYAGFEQQPKSFKNPKILSLNIELELKAEKDNAEVRID 265
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A7S3J9Y8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J9Y8_9SPIT) HSP 1 Score: 150 bits (380), Expect = 2.310e-43 Identity = 74/113 (65.49%), Postives = 94/113 (83.19%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRLETAED 405
E +++L +CA T++NSKLI S+KDFF+ +VV AV KLD D D+ +IG+KKV GGS+ DS+L+EGVAFKKTFSYAGFEQQ KK NPKI LNLELELK+EK+NAE+R+E +D
Sbjct: 59 EKKDMLKKCAMTSLNSKLINSYKDFFSDMVVTAVTKLDEDLDMKMIGIKKVTGGSVTDSLLIEGVAFKKTFSYAGFEQQSKKFENPKICLLNLELELKSEKENAEIRIENPDD 171
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Match: A0A6J0NYD2_RAPSA (T-complex protein 1 subunit eta-like n=2 Tax=malvids TaxID=91836 RepID=A0A6J0NYD2_RAPSA) HSP 1 Score: 153 bits (387), Expect = 3.010e-43 Identity = 75/108 (69.44%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 67 ETRELLVRCAATAMNSKLIGSHKDFFAPLVVDAVLKLDLDQDLNLIGVKKVPGGSMEDSVLVEGVAFKKTFSYAGFEQQPKKIVNPKIIALNLELELKAEKDNAEVRL 390
E + LL +CAAT ++SKLIG K+FFA +VVDAV+ + D LNLIG+KKVPGG+M DS LV+GVAFKKTFSYAGFEQQPKK +NPKI+ LN+ELELK+EK+NAE+RL
Sbjct: 153 EKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGDDDRLNLIGIKKVPGGNMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRL 260 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119426.4004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119426.4004.1 >prot_M-pyrifera_M_contig119426.4004.1 ID=prot_M-pyrifera_M_contig119426.4004.1|Name=mRNA_M-pyrifera_M_contig119426.4004.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp KSETYALSFLALPRTGADLLLSETRELLVRCAATAMNSKLIGSHKDFFAPback to top mRNA from alignment at M-pyrifera_M_contig119426:2..460- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119426.4004.1 ID=mRNA_M-pyrifera_M_contig119426.4004.1|Name=mRNA_M-pyrifera_M_contig119426.4004.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig119426:2..460- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119426:2..460- >mRNA_M-pyrifera_M_contig119426.4004.1 ID=mRNA_M-pyrifera_M_contig119426.4004.1|Name=mRNA_M-pyrifera_M_contig119426.4004.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig119426:2..460- (Macrocystis pyrifera P11B4 male)back to top |