mRNA_M-pyrifera_M_contig119298.3975.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A7S4IBY3_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IBY3_9EUKA) HSP 1 Score: 117 bits (293), Expect = 1.200e-28 Identity = 61/178 (34.27%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 7 ETVEWINRMMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHPKYLE 540
E+ +W+N+ + W T I++ ++ ++ E NKP MV + L+ V +G P LS+VIV+ + + L S+++ME+ A + P+LV++ K++ R+ AWLIP+ PF+S +++SF+ P ID+ VK I +GPDV++ +PGLS AIK M + +++P + E
Sbjct: 75 ESAKWMNKCIQNIWFTSEEFITSTVISEATTLFENNKPSMVHELSLKNVKIGRKCPTLSEVIVHDVAPDQFHFDAQFQLYSEMSMELEAKLGLTKFPVLVRDVFIKSQIRIHAWLIPQPPFISHVQISFVGEPVIDMIVKLIKIGPDVMS-IPGLSAAIKKMMCDIIHQLFVYPNFYE 251
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A7S4MIX7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MIX7_9EUKA) HSP 1 Score: 117 bits (293), Expect = 6.460e-28 Identity = 61/178 (34.27%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 7 ETVEWINRMMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHPKYLE 540
E+ +W+N+ + W T I++ ++ ++ E NKP MV + L+ V +G P LS+VIV+ + + L S+++ME+ A + P+LV++ K++ R+ AWLIP+ PF+S +++SF+ P ID+ VK I +GPDV++ +PGLS AIK M + +++P + E
Sbjct: 75 ESAKWMNKCIQNIWFTSEEFITSTVISEATTLFENNKPSMVHELSLKNVKIGRKCPTLSEVIVHDVAPDQFHFDAQFQLYSEMSMELEAKLGLTKFPVLVRDVFIKSQIRIHAWLIPQPPFISHVQISFVGEPVIDMIVKLIKIGPDVMS-IPGLSAAIKKMMCDIIHQLFVYPNFYE 251
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A388L5W7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L5W7_CHABU) HSP 1 Score: 64.3 bits (155), Expect = 9.000e-9 Identity = 55/199 (27.64%), Postives = 91/199 (45.73%), Query Frame = 1
Query: 1 EVETVEWINRMMLIAWPT-MGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRV------TAW---------------LIPREPFLSQMRVSFLERPDIDVTVKP-ISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHP 528
E ETV W+N +M WP + + + ++ LE KP + + L+ + +G PP++ + V++ N D +EM A +V E Q + R RV TA+ +P PF+ +MRV F+ERP++DV+VKP ++ G DV +PG+S + + +FS + P
Sbjct: 140 ESETVVWLNVLMSRIWPMFLRDLVQDAVLPVMPFFLERFKPWTLRKAVLKSLKLGSSPPVVLQMRVFEEP----------NEDDHAVVEMVVEFLAA--DDMVAELQARVRKRVGLGVWATAYASDLHLEGKVLVGLKFLPGFPFIERMRVCFVERPNLDVSVKPLVNAGVDVTE-IPGISTYVDSIIDTLFSQALVKP 325
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A060TC41_BLAAD (ARAD1D36784p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TC41_BLAAD) HSP 1 Score: 62.8 bits (151), Expect = 3.180e-8 Identity = 47/187 (25.13%), Postives = 86/187 (45.99%), Query Frame = 1
Query: 1 EVETVEWINRMMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVY---KSDANILD-----------------IECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPI---SVGPDVINLVPGLSGAIKDM 492
+ ET+EW+N ++ W P +S ++ + L P + + L T+G PP + V + + D ++D ++ +N +++ + +PILV++ F RV ++ P + + VSFLE P+ D +KP+ + G D IN++PGL+G IK+M
Sbjct: 202 DTETLEWLNTFLVKFWLIYEPVLSATVIATANQVLVDATPGFIESLSLSTFTLGTKPPRVDHVRTFPKTQEDIAVMDWRFSFTPNDTEDLTARQLKSKVNPKVVLSVRIGKGVVSKSLPILVEDMSFSGFVRVRIKMMTSFPHIQTVDVSFLEPPEFDFVLKPVGGETFGFD-INVIPGLTGFIKEM 387
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A8H3TVC9_9TREE (Uncharacterized protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TVC9_9TREE) HSP 1 Score: 60.5 bits (145), Expect = 2.000e-7 Identity = 49/185 (26.49%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 1 EVETVEWINRMMLIAWPTMGPHISNIIMEKSVDALEANKPMM--VSRMCLEGVTMGMVPPILSDVIVYKS--DANIL----------DIE--------CTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGAIKD 489
E ET +WIN ++ AW P + ++ VD + AN P+ + + + T+G P + V Y D ++ D+E +N + + + A +PIL+++ F + R+ L+ P + ++VSF+E+PD D +KP++ P +N +PGLS IKD
Sbjct: 293 ETETADWINNLLDRAWLIAEPLLGATVVAM-VDDILANSPLPPGLDSVRMTTFTLGNKAPKIDSVRTYPETPDDQVIMEWALSFTPNDVEDLTPRQARSKVNPKIALDVRIGKGVVSAGLPILLEDISFTGKMRIKLKLMTNFPHVQTVQVSFMEKPDFDYVLKPLT--PFDVNSIPGLSSFIKD 474
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A1E1KTS8_9HELO (Probable transmembrane protein n=6 Tax=cellular organisms TaxID=131567 RepID=A0A1E1KTS8_9HELO) HSP 1 Score: 57.0 bits (136), Expect = 3.090e-6 Identity = 45/184 (24.46%), Postives = 82/184 (44.57%), Query Frame = 1
Query: 1 EVETVEWINRMMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVY-KSDANIL-------------------DIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPIS---VGPDVINLVPGLSGAI 483
+ E++EWIN ++ WP P ++ I+ L + P + + ++ T+G PP + V Y K+D +++ I+ +N + + + + ++V++ F RV L P + ++ +SFLE+P ID + KPI +G D IN +PGL I
Sbjct: 243 DTESLEWINSFLVKFWPIFQPVLAETIINSVDQVLSTSTPAFLDSLRMKTFTLGNKPPRMEHVKTYPKADDDVVLMDWKFSFTPNDHADMTSRQIKNKVNPKIVLEIRIGKAMISKGLDVIVEDMAFSGLMRVKIKLQIPFPHVEKIEISFLEKPTIDYSCKPIGGEMLGFD-INFIPGLESFI 425
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A5J4YSL8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSL8_PORPP) HSP 1 Score: 55.1 bits (131), Expect = 1.350e-5 Identity = 39/183 (21.31%), Postives = 89/183 (48.63%), Query Frame = 1
Query: 1 EVETVEWINRMMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDAN----ILDIECTINLDSQIAMEMAAYTKPARVPIL-VKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHPKY 534
++E+ W+NR++ W P + I++E + N P V + ++ + +G P L + +++ +LD + L S+ +A A +P++ V++ + + R+ L ++V+F+ERP ++++V+P+S+ D+ +L P LS + + S+ + P++
Sbjct: 62 QMESAAWLNRILAQLWLRQAPFFAAILLETLRAKISENPPPFVPDLFVQNLCLGNRAPQLDHLKTFRTSQEDKRLVLDADVDW-LTSKFEFRLATKWMTANIPLISVEKLNVRCKLRLVLELDDYTGEFHALKVAFVERPRVEMSVEPLSLSFDICSL-PALSNWVFNFISVTMSEALLWPRF 242
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A6A5PJS3_LUPAL (Uncharacterized protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5PJS3_LUPAL) HSP 1 Score: 54.7 bits (130), Expect = 1.780e-5 Identity = 49/190 (25.79%), Postives = 86/190 (45.26%), Query Frame = 1
Query: 1 EVETVEWINRMMLIAWPTMGPHIS--NIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDV-IVYKSDANILDIECTINLDSQIAMEMAAYTKPAR-------VPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISV-GPDVINLVPGLSGAIKDMFIGMFSDQWIHPKYL 537
+ ETV W+N + WP I+ NI++ LE KP ++ + +G PP+++++ ++ KS+ + L +E +N + M K + + + + + V I PF+S++RV F+E P +TVKPI G DV L PG++G + + F + P L
Sbjct: 71 DFETVRWLNHAIKNIWPICMEQIASQNILLPIIPWFLEKYKPWTAKEAVVQHLYLGKNPPLITEMRVLRKSNDDHLVLELGMNFLTADDMSAILSVKLRKRLGFGMTAKLHITGMHVEGKVLVGVKFIQARPFISRVRVCFVEPPYFQMTVKPIFTHGLDVTEL-PGIAGWLDKILSIAFEQTLVEPNML 259 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119298.3975.1 >prot_M-pyrifera_M_contig119298.3975.1 ID=prot_M-pyrifera_M_contig119298.3975.1|Name=mRNA_M-pyrifera_M_contig119298.3975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILback to top mRNA from alignment at M-pyrifera_M_contig119298:5..544+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119298.3975.1 ID=mRNA_M-pyrifera_M_contig119298.3975.1|Name=mRNA_M-pyrifera_M_contig119298.3975.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119298:5..544+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119298:5..544+ >mRNA_M-pyrifera_M_contig119298.3975.1 ID=mRNA_M-pyrifera_M_contig119298.3975.1|Name=mRNA_M-pyrifera_M_contig119298.3975.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig119298:5..544+ (Macrocystis pyrifera P11B4 male)back to top |