mRNA_M-pyrifera_M_contig119176.3949.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: A0A5A8CUI3_CAFRO (Sphingomyelin phosphodiesterase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUI3_CAFRO) HSP 1 Score: 108 bits (270), Expect = 7.730e-25 Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGDQFGDTNNATVDLIM 414
LC GI +F PE ++A AL+PERDC A+G C + ++ + A P+ A + +V+ +TD+HWD Y +GA++DCGEP CCR VQG +CGYWGD GDT VD ++
Sbjct: 102 LCRGITSLFTPEILFIAAHAALDPERDCTALGLCNASTLAEAPILR--AAPSFPSAPREAGTTI-------------KVMQITDLHWDPNYTMGARTDCGEPDCCRGVQGMATGSETACGYWGDHAGDTPTVMVDSML 224
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: A0A812J149_9DINO (Hydroxymethylbilane synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812J149_9DINO) HSP 1 Score: 108 bits (270), Expect = 9.450e-25 Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGDQFGDTNNATVDLIM 414
LC GI +F PE ++A AL+PERDC A+G C + ++ + A P+ A + +V+ +TD+HWD Y +GA++DCGEP CCR VQG +CGYWGD GDT VD ++
Sbjct: 1012 LCRGITSLFTPEILFIAAHAALDPERDCTALGLCNASTLAEAPILR--AAPSFPSAPREAGTTI-------------KVMQITDLHWDPNYTMGARTDCGEPDCCRGVQGMATGSETACGYWGDHAGDTPTVMVDSML 1134
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: UPI000C786C09 (sphingomyelin phosphodiesterase-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C786C09) HSP 1 Score: 80.5 bits (197), Expect = 5.820e-15 Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIE-QFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD 372
+CSG+V+ FGPE + I+ PE C GF + + ++ L P SE E + +RV+HL+D HWD Y+ G+ ++CGEPLCCRS + D GYWGD
Sbjct: 158 ICSGLVESFGPEIYTVVSNISQSPEEMC---GFMFGEACNNPYNPKHEWTILLPPVSKPNYSE------PELSTGETFRVLHLSDTHWDPFYQEGSNANCGEPLCCRSTSSAVSDPEDKAGYWGD 273
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: UPI000C76CFB4 (uncharacterized protein LOC111711040 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76CFB4) HSP 1 Score: 80.5 bits (197), Expect = 6.390e-15 Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIE-QFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD 372
+CSG+V+ FGPE + I+ PE C GF + + ++ L P SE E + +RV+HL+D HWD Y+ G+ ++CGEPLCCRS + D GYWGD
Sbjct: 922 ICSGLVESFGPEIYTVVSNISQSPEEMC---GFMFGEACNNPYNPKHEWTILLPPVSKPNYSE------PELSTGETFRVLHLSDTHWDPFYQEGSNANCGEPLCCRSTSSAVSDPEDKAGYWGD 1037
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: UPI000C2043A7 (sphingomyelin phosphodiesterase-like isoform X1 n=4 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C2043A7) HSP 1 Score: 75.1 bits (183), Expect = 3.470e-13 Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD-QFGDTNNATVDLIM 414
+C GI + F PE Y+ GQ+ + PE C F G GD + P + EQ+ + ++V+HL+D H+D Y G+ +DC EPLCCR G +K + G WGD + DT TVD ++
Sbjct: 188 VCEGITEQFAPEVIYVLGQVKIGPEEICS---FVIGDGCGDVYNPYHDWEVIFPPVPKPT---LIEQKIPEIQAPTFKVLHLSDTHYDPYYLEGSNADCNEPLCCRLTNGPAASKEQAAGKWGDYRKCDTPKRTVDNLL 320
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: A0A6A4K536_APOLU (Sphingomyelin phosphodiesterase n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4K536_APOLU) HSP 1 Score: 72.4 bits (176), Expect = 3.930e-12 Identity = 41/139 (29.50%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD-QFGDTNNATVDLIM 414
+C GI ++FG EF Y+ ++ L P C F GD + + P +Q+ + ++V+H++D H+D Y+ G ++C EPLCCR G N + + G WGD + DT TVD ++
Sbjct: 181 VCEGITEIFGGEFVYVLRRVTLSPNEICS---FVIGDACGDDDVPAHEWSVVFPPVPKPQPKQILAPKD---GASTFKVLHISDTHYDPYYQEGTNAECNEPLCCRLTNGPAPNAAAAAGRWGDYRKCDTPKRTVDNML 313
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: A0A6V7II33_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7II33_9HYME) HSP 1 Score: 68.2 bits (165), Expect = 5.480e-12 Identity = 41/133 (30.83%), Postives = 62/133 (46.62%), Query Frame = 1
Query: 31 PEFTYLAGQIALEPERDCKAM-----GFCTDGGVGDSAAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGDQFGDTNNATVDLIM 414
PEF Y+ + + P++ C M GF I + L P S+ V ++V+HL+D H+D +Y+ G+ ++CGEPLCCR GK N D+ G WG DT T+D ++
Sbjct: 1 PEFVYVLRRAEMYPKQICSFMYGEVCGFTYSN-------IHDWNIPLLPTKKPPVSQPVAPNADA----KTFKVLHLSDTHFDPLYQEGSNANCGEPLCCRPNSGKPSNPGDAAGKWGAYTCDTPKRTIDHML 122
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: D6WVW3_TRICA (Sphingomyelin phosphodiesterase n=8 Tax=Tribolium TaxID=7069 RepID=D6WVW3_TRICA) HSP 1 Score: 71.2 bits (173), Expect = 9.910e-12 Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD-QFGDTNNATVDLIM 414
+C GI ++F E Y+ G++ + P+ C + G V + + + P A + EQ+ ++V+HL+D H+D Y G+ +DC EPLCCR G K + G WGD + DT TVD ++
Sbjct: 150 VCEGITELFAGEVIYVLGKVTIGPDEVCSFVIGDACGDVYNPLHEWEVMFPPVPKPA------IVEQKIPEINAPTFKVLHLSDTHYDPYYHEGSNADCSEPLCCRLTNGLASTKEQAAGKWGDYRKCDTPKITVDNML 282
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: A0A6L5CRG0_9INSE (Sphingomyelin phosphodiesterase n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CRG0_9INSE) HSP 1 Score: 71.2 bits (173), Expect = 9.980e-12 Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDS-AAIEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD-QFGDTNNATVDLIM 414
+C GI ++FG E TY+ ++ L PE C GF GD ++ + P V + ++V+HL+D H+D Y GA +DC EPLCCR G + + + G WGD + DT TVD ++
Sbjct: 193 VCDGITELFGGEVTYVLQRLKLSPEEIC---GFVIGDACGDIYTPHHEWQLTFPPV----PKPPVIPMKPPKPGSPTFKVLHLSDTHYDPYYHEGANADCAEPLCCRLTNGPPASAATAAGRWGDYRKCDTPKRTVDSML 325
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Match: A0A834IPD3_RHYFE (Sphingomyelin phosphodiesterase n=2 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IPD3_RHYFE) HSP 1 Score: 71.2 bits (173), Expect = 1.000e-11 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 1 LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAA-----IEQFIASLSPNGANGASEQVEEQQKEWKREDVYRVVHLTDVHWDQMYEVGAKSDCGEPLCCRSVQGKGENKSDSCGYWGD-QFGDTNNATVDLIM 414
+C GI ++F E ++ G++ + P+ C + +GD+ ++ + P +EQ +Q ++V+HL+D H+D Y GA +DC EPLCCR G +K + G WGD + DT TVD ++
Sbjct: 224 VCEGITELFASEVIHVLGKVNIGPDEICSFV-------IGDACGDVYNPYHEWEVAFPPVPKPTPTEQEIPEQSA----PTFKVLHLSDTHYDPYYMEGANADCSEPLCCRLTNGPASSKESAAGKWGDYRKCDTPKITVDNML 356 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119176.3949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119176.3949.1 >prot_M-pyrifera_M_contig119176.3949.1 ID=prot_M-pyrifera_M_contig119176.3949.1|Name=mRNA_M-pyrifera_M_contig119176.3949.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp LCSGIVKVFGPEFTYLAGQIALEPERDCKAMGFCTDGGVGDSAAIEQFIAback to top mRNA from alignment at M-pyrifera_M_contig119176:101..514+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119176.3949.1 ID=mRNA_M-pyrifera_M_contig119176.3949.1|Name=mRNA_M-pyrifera_M_contig119176.3949.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig119176:101..514+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119176:101..514+ >mRNA_M-pyrifera_M_contig119176.3949.1 ID=mRNA_M-pyrifera_M_contig119176.3949.1|Name=mRNA_M-pyrifera_M_contig119176.3949.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig119176:101..514+ (Macrocystis pyrifera P11B4 male)back to top |