prot_M-pyrifera_M_contig119083.3915.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119083.3915.1
Unique Nameprot_M-pyrifera_M_contig119083.3915.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length114
Homology
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: A0A0F7SN91_PHARH (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SN91_PHARH)

HSP 1 Score: 80.1 bits (196), Expect = 3.530e-15
Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0
Query:    3 PDCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAK------SNGIHVVHVAWLFASAARFTKLSELGFARLEPA 111
            PD + +L   +  VLRGCRIVFSGV PLG  PE  + WR+A   GA C K    GS   TH +A   GT+KV  A       ++ IH+V   WL  S A++T L E  +  + P+
Sbjct:  523 PDVKPILDYIKRRVLRGCRIVFSGVIPLGTKPELFSLWRLAVQHGAVCEKNLSTGS---THLIARASGTQKVHEASRMDGGGTSRIHIVTPYWLIDSIAQWTHLPEWMYLLIPPS 634          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: A0A804K136_MUSAM (RNA polymerase II C-terminal domain phosphatase-like n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804K136_MUSAM)

HSP 1 Score: 76.6 bits (187), Expect = 5.550e-14
Identity = 46/104 (44.23%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFPLGVV-PEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGFA 106
            D R LL  ++  VLRGCRIVFS VFP+G   P+Q   W+ A+  GA C  Q +   V  TH +A   GT+KV  A S G  VVH  W+ AS   + + +E  FA
Sbjct:  458 DVRSLLEAEQRKVLRGCRIVFSRVFPVGEANPQQHPLWKKAQQFGAVCTDQ-IDEHV--THVIATALGTDKVQRALSTGKFVVHPGWIEASTLLYRRANEHNFA 558          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: A0A328DHA7_9ASTE (RNA polymerase II C-terminal domain phosphatase-like n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DHA7_9ASTE)

HSP 1 Score: 74.3 bits (181), Expect = 3.480e-13
Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGFARLEP 110
            D R +L   R  VL+GC+IVFS VFP  +  E+   WRIA  LGA C  + V  SV  TH V++  GTEK  +A+ N   +VH  W+ A+  RF +  E  F  + P
Sbjct:  379 DVREVLKGVRKEVLKGCKIVFSRVFPNNIQAEKHHLWRIAEQLGATCSIE-VDESV--THVVSMDAGTEKSRWARQNKKFLVHPKWIEAANYRFERKPEKDFPVVVP 482          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: W1P8K8_AMBTC (Protein-serine/threonine phosphatase n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1P8K8_AMBTC)

HSP 1 Score: 74.3 bits (181), Expect = 3.770e-13
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFPLGVV-PEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGFARLEP 110
            D R +L+ ++  +L+GC++VFS VF +G+  P     W+ A   GA C  Q +   V  TH VA+  GT+KV +A S G +VVH  WL ASA  + + +E  F+ + P
Sbjct:  905 DVRDILASEQQKILKGCKVVFSRVFHVGLANPHLHPLWQTAEQFGAICTNQ-IDDEV--THVVAISLGTDKVNWAISTGRYVVHPGWLEASALLYRRANERDFSIMPP 1009          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: W1PT59_AMBTC (RNA polymerase II C-terminal domain phosphatase-like n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PT59_AMBTC)

HSP 1 Score: 73.9 bits (180), Expect = 4.090e-13
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFP-----LGVVPEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGFARLE 109
            D R LL+ ++  +LRGC+++FSG+F      L + P     W+ A   GA C  Q +   V  TH VA   GT KV +A SNG  VVH  WL AS+  + +++EL FAR++
Sbjct:  281 DIRDLLASQQQKILRGCKVLFSGIFQADDMNLNLHPF----WKTAEQFGAICTNQ-IDDQV--THVVARLPGTTKVNWALSNGKFVVHPGWLKASSFLYRRVNELDFARID 384          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: CPL4_ARATH (RNA polymerase II C-terminal domain phosphatase-like 4 n=4 Tax=Arabidopsis thaliana TaxID=3702 RepID=CPL4_ARATH)

HSP 1 Score: 73.6 bits (179), Expect = 6.230e-13
Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGF 105
            D R++L + R  +L+GC+IVFS VFP    PE    W++A  LGA C  + V  SV  TH VA+  GTEK  +A     +VVH  W+ A+   + K  E  F
Sbjct:  329 DVRLMLKQVRKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATE-VDASV--THVVAMDVGTEKARWAVREKKYVVHRGWIDAANYLWMKQPEENF 427          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: UPI0009016285 (RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1 n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI0009016285)

HSP 1 Score: 73.6 bits (179), Expect = 6.580e-13
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    1 SIPDCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGFA 106
            S  D R++L + R  +L+GC++VFS VFP    PE    W++A  LGA C  + V  SV  TH VA+  GTEK  +A      VVH  W+ A+   + K  E  F+
Sbjct:  401 SNKDVRLMLKQVRKEILKGCKVVFSRVFPTKAKPEDHPLWKMAEDLGATCATE-VDASV--THVVAMEMGTEKARWAVREKKFVVHRGWIDAANYLWKKQPEENFS 503          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: G7JJ51_MEDTR (Protein-serine/threonine phosphatase n=3 Tax=Medicago truncatula TaxID=3880 RepID=G7JJ51_MEDTR)

HSP 1 Score: 73.6 bits (179), Expect = 7.040e-13
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFPLGVV-PEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGFA 106
            D R +L+ ++  +L GCRIVFSGVFP+G   P     WR A   GA+C  + V   V  TH VA   GT+KV +  SNG  VV+  W+ AS   + +++E  FA
Sbjct:  962 DVRNILASEQRKILGGCRIVFSGVFPVGETNPHLHPLWRTAEQFGASCTNK-VDPQV--THVVAQSPGTDKVNWGISNGKFVVYPNWVEASTLLYRRMNEQDFA 1062          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: A0A7G2FGZ8_ARATH (Reticulon-like protein n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A7G2FGZ8_ARATH)

HSP 1 Score: 73.6 bits (179), Expect = 7.050e-13
Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 0
Query:    4 DCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAACLKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKLSELGF 105
            D R++L + R  +L+GC+IVFS VFP    PE    W++A  LGA C  + V  SV  TH VA+  GTEK  +A     +VVH  W+ A+   + K  E  F
Sbjct:  884 DVRLMLKQVRKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATE-VDASV--THVVAMDVGTEKARWAVREKKYVVHRGWIDAANYLWMKQPEENF 982          
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Match: A0A8B7XND0_ACAPL (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XND0_ACAPL)

HSP 1 Score: 72.8 bits (177), Expect = 1.280e-12
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 0
Query:    1 SIPDCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAAC-------LKQPVQGSVLATHCVALREGTEKVMFA-KSNGIHVVHVAWLFASAARFTKLSE 102
            SIPD +++L   +  VL G  +VFSGVFP  + PEQS  W++A +LGA         +K     +   TH VA + GT KV  A ++  IH+V   WL+    R+ ++ E
Sbjct:  464 SIPDLKIILPALKQKVLAGVNLVFSGVFPTNMNPEQSKAWKVASALGARISPGIICGVKGSASPANATTHLVAAKAGTSKVHTAQRAKSIHIVTPEWLWCCWERWQRVDE 573          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119083.3915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F7SN91_PHARH3.530e-1541.74RNA polymerase II subunit A C-terminal domain phos... [more]
A0A804K136_MUSAM5.550e-1444.23RNA polymerase II C-terminal domain phosphatase-li... [more]
A0A328DHA7_9ASTE3.480e-1342.06RNA polymerase II C-terminal domain phosphatase-li... [more]
W1P8K8_AMBTC3.770e-1338.89Protein-serine/threonine phosphatase n=3 Tax=Ambor... [more]
W1PT59_AMBTC4.090e-1340.54RNA polymerase II C-terminal domain phosphatase-li... [more]
CPL4_ARATH6.230e-1341.18RNA polymerase II C-terminal domain phosphatase-li... [more]
UPI00090162856.580e-1339.62RNA polymerase II C-terminal domain phosphatase-li... [more]
G7JJ51_MEDTR7.040e-1342.31Protein-serine/threonine phosphatase n=3 Tax=Medic... [more]
A0A7G2FGZ8_ARATH7.050e-1341.18Reticulon-like protein n=3 Tax=Arabidopsis thalian... [more]
A0A8B7XND0_ACAPL1.280e-1237.27RNA polymerase II subunit A C-terminal domain phos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 16..106
e-value: 8.8E-19
score: 69.6
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 16..105
IPR001357BRCT domainPFAMPF00533BRCTcoord: 14..93
e-value: 3.9E-5
score: 23.9
NoneNo IPR availablePANTHERPTHR23081:SF0RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEcoord: 2..105
IPR039189CTD phosphatase Fcp1PANTHERPTHR23081RNA POLYMERASE II CTD PHOSPHATASEcoord: 2..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119083contigM-pyrifera_M_contig119083:193..534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119083.3915.1mRNA_M-pyrifera_M_contig119083.3915.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119083 193..534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119083.3915.1 ID=prot_M-pyrifera_M_contig119083.3915.1|Name=mRNA_M-pyrifera_M_contig119083.3915.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
SIPDCRVLLSRKRYAVLRGCRIVFSGVFPLGVVPEQSTEWRIARSLGAAC
LKQPVQGSVLATHCVALREGTEKVMFAKSNGIHVVHVAWLFASAARFTKL
SELGFARLEPAQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom
IPR039189Fcp1