mRNA_M-pyrifera_M_contig11833.3789.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: D7FN52_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN52_ECTSI) HSP 1 Score: 285 bits (728), Expect = 4.510e-90 Identity = 150/173 (86.71%), Postives = 161/173 (93.06%), Query Frame = 1
Query: 1 QALVKAQLKMGSDRESRKRPWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKKKAE 519
+ALV AQLKMGSDRESRKR WEENELSSLAKAIVKFPAGSQNRWEHI+QFIAQATRAK+PF+KEDCIAKYQQ+HAAPAGPQKV+ PAV A ++A A SAPERPSRR+P+EDVWS+AQQQQLE AL RFPMGMDKNERWASISAAVPGKSKKQCVERFK VKTQLLAKKKAE
Sbjct: 442 EALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAASSSAN-ARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 613
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: A0A7S3YDN6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDN6_HETAK) HSP 1 Score: 122 bits (305), Expect = 4.440e-30 Identity = 72/143 (50.35%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 61 WEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVK 489
W E ELS LAKA+ KFPAGSQNRW I+ FIA + +KE+CI KYQ+I AP K V AA PS R +EDVW++ QQ LE+ L + P MDKNERW++ISA V GK+KKQCVERFK ++
Sbjct: 125 WSEEELSCLAKAVQKFPAGSQNRWLTISNFIAHMVHTER--SKEECIQKYQEIQTAPGSKPKAGGTKV----AAGAXXXXXXXGPSARASEEDVWTQDQQAALEEGLKKHPASMDKNERWSAISAGVEGKTKKQCVERFKALR 261
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: B7G4P2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4P2_PHATC) HSP 1 Score: 117 bits (292), Expect = 3.450e-27 Identity = 67/150 (44.67%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 61 WEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKK 510
W + ELS+LAKA+ K+P G +RWE IA F+ + EP +KE+CI KY + + P T + V AA+ P S+ Q EDVW+ Q QQL+ L P MDKNERW +I+ VPGKSKKQCV+RFK+++ L KK
Sbjct: 433 WTKEELSALAKAVKKYPPGGSSRWEQIALFVNNLCKQDEPRSKEECIEKYNNVAKTHSKP----TESTNGVAAASEPENSS-------QSNEDVWTAEQDQQLQDGLAANPASMDKNERWTAITECVPGKSKKQCVQRFKVIRDALKKKK 571
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: A0A7S2SB83_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SB83_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.640e-24 Identity = 68/165 (41.21%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 19 QLKMGSDRESRKRPWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKKK 513
Q ++ RE + PW +ELSSLAKA+ KFP G++NRW + +++ + +EDCI + +I A+ +K + T + + + P E VWS QQ LE AL +FP MDKNERW SI+AAV GKSKK+CV RFK ++ ++LAKKK
Sbjct: 426 QKRLEKKREKQFAPWSADELSSLAKAMKKFPGGTRNRWMMVCKYLNTIPGSTVERTQEDCI-QQSKIMASDTEKRKDL----------GTSKAAFDQFQKKLAPSEAVWSNEQQAALEAALKKFPASMDKNERWKSIAAAVEGKSKKECVARFKELRAKVLAKKK 579
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: A0A7S2PG91_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PG91_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.390e-24 Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 58 PWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKKKAEKKA 528
PW ++EL++L+KAI K+PAG RW+ IA FI + +EP KE+CI KY I +APA + PA + W+ + L+ L ++P M+KNERW SI+ VPG+SKK+CVERFK ++ + KKA A
Sbjct: 502 PWTKDELAALSKAIKKYPAGGAARWDAIASFINNLCKQEEPRTKEECIEKYNLIASAPAAKDTIAAPA-----------------------DDKAWTEKEDTLLQDMLRKYPASMEKNERWKSIAEGVPGRSKKECVERFKAIREAVKTGKKARSNA 635
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: B8BZ84_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ84_THAPS) HSP 1 Score: 106 bits (264), Expect = 1.970e-23 Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 58 PWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVK 489
PW ++EL +LAKA+ K+PAG NRWE IA F+ + EP +KE+CI KY I AA A P P+ +T +A + P W+ Q L++ L ++P MDKNERW SI+ VPG+SKK+CV+RFK ++
Sbjct: 387 PWTKDELGALAKAVKKYPAGGSNRWEAIALFVNNLCKQAEPRSKEECIEKYNSI-AASAAP-----------PSGSTDKDTAADGEDSGAP----WTEEQDSLLQEMLRKYPADMDKNERWKSIAKGVPGRSKKECVDRFKAIR 514
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: K0SEK9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEK9_THAOC) HSP 1 Score: 104 bits (260), Expect = 9.060e-23 Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 55 RPWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKK 510
+PW + EL++LAKA+ K+PAG NRWE IA FI + ++P KE+CIA++ ++ ++P+ PAAA + + D W+ AQ L+ L ++P MDKNERW+ I+ V GKSKKQCV RFK ++ + KK
Sbjct: 502 KPWTKEELAALAKAVKKYPAGGANRWESIALFINNLCKQQDPRGKEECIAQFNKVTSSPS-------------PAAAPGGKE--DDAGKSAEAGDEWTDAQDAALQDMLRKYPASMDKNERWSKIAEGVEGKSKKQCVGRFKAIREAVKGKK 638
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: A0A1E7FW12_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW12_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.000e-22 Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 58 PWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKK 510
P+ + E+S+L+K + KFPAG NRW+ I+ +I R +P KE+CI + +++ A G Q +P T S DVW+ Q QQL+K L FP ++KNERW+SIS V GKSKK+CVERFK ++ L AKK
Sbjct: 425 PFTKEEMSALSKGVKKFPAGGGNRWDQISHYINNVCRPDDPRTKEECIEIFNKVNKA--GKQ---------LPNGNT---------SHAVDDSDVWNSEQDQQLQKGLTMFPSSIEKNERWSSISDEVTGKSKKECVERFKAIRDALKAKK 555
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: W7TYH1_9STRA (Subfamily c member 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH1_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.210e-22 Identity = 71/184 (38.59%), Postives = 95/184 (51.63%), Query Frame = 1
Query: 4 ALVKAQLKMGSDRESRKRPWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAA------------TPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQLLAKKKAE 519
A A+ G + ++ W E EL LAKA+V+FPAG+Q RW+ IA ++ R +KE+CI +YQ + A V VVA A TS E + D WS+ QQ+QLE LV +P M+KNERW IS V GKSKK+C ER+K ++ + AKKK E
Sbjct: 492 AHASAEKDGGEESSPKEAAWTEEELGVLAKAVVRFPAGTQKRWQCIADYLNHMVRGASLRSKEECIKQYQVVQAG------VSKSRVVAATGGAGAGGGSEGRKSGKTGTSRGEDNGKAVASGDGWSQEQQKQLEAGLVTYPASMEKNERWKRISEGVQGKSKKECAERYKALRAAV-AKKKEE 668
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Match: A0A1Z5JZ63_FISSO (DnaJ homolog subfamily C member 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ63_FISSO) HSP 1 Score: 99.4 bits (246), Expect = 6.210e-21 Identity = 57/146 (39.04%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 61 WEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEPFNKEDCIAKYQQIHAAPAGPQKVITPAVVAVPAAATPATSAPERPSRRQPKEDVWSRAQQQQLEKALVRFPMGMDKNERWASISAAVPGKSKKQCVERFKLVKTQL 498
W + E+S+LAK I KFPAG NRW+ IA ++ R P +++CI KY + A K V P+ + + W+ Q QQL+ L +FP MDKNERWASI+ V GKSKK CV+RFK ++ L
Sbjct: 419 WSQEEMSALAKGIKKFPAGGANRWDQIANYVNNLCRQDVPRTRQECIDKYNAL----ARETKNTDSTTV----------EEPKNGADNGDENSEWTAEQDQQLQDGLTKFPATMDKNERWASIAKGVTGKSKKDCVQRFKAIREAL 550 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11833.3789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11833.3789.1 >prot_M-pyrifera_M_contig11833.3789.1 ID=prot_M-pyrifera_M_contig11833.3789.1|Name=mRNA_M-pyrifera_M_contig11833.3789.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp MGSDRESRKRPWEENELSSLAKAIVKFPAGSQNRWEHIAQFIAQATRAKEback to top mRNA from alignment at M-pyrifera_M_contig11833:383..1935+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11833.3789.1 ID=mRNA_M-pyrifera_M_contig11833.3789.1|Name=mRNA_M-pyrifera_M_contig11833.3789.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1553bp|location=Sequence derived from alignment at M-pyrifera_M_contig11833:383..1935+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11833:383..1935+ >mRNA_M-pyrifera_M_contig11833.3789.1 ID=mRNA_M-pyrifera_M_contig11833.3789.1|Name=mRNA_M-pyrifera_M_contig11833.3789.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig11833:383..1935+ (Macrocystis pyrifera P11B4 male)back to top |