mRNA_M-pyrifera_M_contig115889.3302.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A2E7KKZ1_9PLAN (Cysteine--tRNA ligase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KKZ1_9PLAN) HSP 1 Score: 398 bits (1022), Expect = 1.070e-135 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD 561
RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD
Sbjct: 78 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD 264
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A6C6Z0_9PLAN (Cysteine--tRNA ligase n=13 Tax=Planctomycetaceae TaxID=126 RepID=A6C6Z0_9PLAN) HSP 1 Score: 374 bits (959), Expect = 3.700e-126 Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD 561
+AAE NISVEKLAA+MTQDYFDNLETMG+DTITDFPKATDYI+AM EIIQ+LID+ AYPLDGDVYFSA +DN YGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD
Sbjct: 78 KAAELNISVEKLAADMTQDYFDNLETMGVDTITDFPKATDYIEAMQEIIQSLIDKDFAYPLDGDVYFSAAADNKYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD 264
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A177RB13_9PLAN (Cysteine--tRNA ligase n=1 Tax=Planctomyces sp. SCGC AG-212-M04 TaxID=1799657 RepID=A0A177RB13_9PLAN) HSP 1 Score: 304 bits (779), Expect = 6.080e-99 Identity = 138/185 (74.59%), Postives = 160/185 (86.49%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQA 555
RA EK +V+ LA +MT DYFDNL+ MG+D+I FP ATD+I MLE+I TLI++G+AYPL+GDVYF+ ESD +YG LS R I +M+AGTRVEANDKK+NPADFALWK S+PGEPAWDSPWGPGRPGWHIECSAMS KLLGDS DIHGGGLDLMFPHHENE AQSECC+GK + RYW+HNGLMQ+
Sbjct: 78 RAQEKGTTVKALAEQMTADYFDNLKLMGVDSIDKFPYATDHIGDMLEMIGTLIEKGHAYPLNGDVYFAVESDPDYGKLSNRSIAQMLAGTRVEANDKKRNPADFALWKSSKPGEPAWDSPWGPGRPGWHIECSAMSAKLLGDSIDIHGGGLDLMFPHHENELAQSECCSGKPFARYWLHNGLMQS 262
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A3L7QQ37_9BACT (Cysteine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7QQ37_9BACT) HSP 1 Score: 302 bits (773), Expect = 6.240e-98 Identity = 134/185 (72.43%), Postives = 162/185 (87.57%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQA 555
+AAEK +V+ LA +MT DYFDNL+ MG+D+I FP ATD+I+ MLE+IQ LI++G+AYPL+GDVYF+ E+D++YG LS R I +M+AGTRVEAND K+NPADFALWK S+PGEPAWDSPWGPGRPGWHIECSAMS K+LG+S DIHGGGLDLMFPHHENE AQSECC+GK + RYW+HNGLMQ+
Sbjct: 78 KAAEKGTTVKALAEQMTADYFDNLKLMGVDSIDHFPYATDHINDMLEMIQKLIEKGHAYPLNGDVYFAVETDDDYGKLSNRSISQMLAGTRVEANDTKRNPADFALWKSSKPGEPAWDSPWGPGRPGWHIECSAMSAKILGESIDIHGGGLDLMFPHHENELAQSECCSGKPFARYWLHNGLMQS 262
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A517SKZ5_9PLAN (Cysteine--tRNA ligase n=2 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SKZ5_9PLAN) HSP 1 Score: 301 bits (770), Expect = 1.920e-97 Identity = 134/185 (72.43%), Postives = 159/185 (85.95%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQA 555
+A EK +V+ LA +MT DYFDNL+ MG+D++ FP ATD+I MLE+I L+++G+AYPL+GDVYFS ESD +YG LS R I +M+AGTRVEANDKK+NPADFALWK S+PGEPAWDSPWGPGRPGWHIECSAMS K+LGDS DIHGGGLDLMFPHHENE AQSECC+GK + RYW+HNGLMQ+
Sbjct: 90 KAQEKGTTVKALAEQMTTDYFDNLKLMGVDSVDQFPYATDHIGDMLEMIGRLVEKGHAYPLNGDVYFSVESDPDYGKLSNRSIAQMLAGTRVEANDKKRNPADFALWKSSKPGEPAWDSPWGPGRPGWHIECSAMSAKILGDSIDIHGGGLDLMFPHHENELAQSECCSGKPFARYWLHNGLMQS 274
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A142WRV1_9PLAN (Cysteine--tRNA ligase n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WRV1_9PLAN) HSP 1 Score: 299 bits (766), Expect = 5.060e-97 Identity = 134/185 (72.43%), Postives = 160/185 (86.49%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQA 555
+A EK ++V+ LA +MT DYFDNL+ MG+D+I FP ATD+I ML++I LI++G+AYPL GDVYFS ESD++YG LS R +E+M+AGTRVEAND+KKNPADFALWK S+ GEPAWDSPWGPGRPGWHIECSAMS K+LGDS DIHGGGLDLMFPHHENE AQSECC+GK + RYW+HNGLMQ+
Sbjct: 78 KANEKGMTVKALAEQMTADYFDNLKLMGVDSIDHFPYATDHIQDMLDMITRLIEKGHAYPLGGDVYFSVESDDDYGKLSNRSLEQMLAGTRVEANDRKKNPADFALWKGSKAGEPAWDSPWGPGRPGWHIECSAMSAKILGDSIDIHGGGLDLMFPHHENELAQSECCSGKPFARYWLHNGLMQS 262
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A1I3AT31_9PLAN (Cysteine--tRNA ligase n=1 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3AT31_9PLAN) HSP 1 Score: 299 bits (765), Expect = 6.960e-97 Identity = 137/185 (74.05%), Postives = 159/185 (85.95%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQA 555
+A EK + V+ LA +MT+DYFDNL+ MGIDTI FP ATDYI AM E+IQ LID+G+AY L+GDVYFS D +YG LSGR +E+M+AGTRVEAND+K+NPADFALWK S+ GEPAWDSPWGPGRPGWHIECSAMS KLLGDS DIHGGGLDLMFPHHENE AQSE +GKT+V+YW+HNGLMQ+
Sbjct: 78 KAKEKGMEVKALAEQMTEDYFDNLKLMGIDTIDHFPYATDYIGAMQEMIQGLIDKGSAYELNGDVYFSVTHDADYGKLSGRSVEQMLAGTRVEANDRKQNPADFALWKSSKAGEPAWDSPWGPGRPGWHIECSAMSSKLLGDSIDIHGGGLDLMFPHHENELAQSESASGKTFVKYWLHNGLMQS 262
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: UPI0019888568 (Cysteine--tRNA ligase n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI0019888568) HSP 1 Score: 290 bits (742), Expect = 9.860e-97 Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQAS 558
RA E+ ++VE LA EMTQDYFDNL+TM +D I FP AT +I M EII TLI++G AYPLDGDVYF+ D +YG LSGR +E+M+AGTR E + K++PADFALWK S+PGEPAW SPWGPGRPGWHIECSAM++K+LGDS DIHGGGLDLMFPHHENE AQSE CTGK + RYW+HNGLMQAS
Sbjct: 78 RANERKMTVEALAKEMTQDYFDNLKTMAVDGIDHFPYATQHIQEMQEIIATLIEKGYAYPLDGDVYFNCTKDEDYGKLSGRSLEQMLAGTRAETHGGKQHPADFALWKGSKPGEPAWPSPWGPGRPGWHIECSAMAKKILGDSIDIHGGGLDLMFPHHENELAQSESCTGKPFARYWMHNGLMQAS 263
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A518CK04_9PLAN (Cysteine--tRNA ligase n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A518CK04_9PLAN) HSP 1 Score: 297 bits (761), Expect = 2.630e-96 Identity = 132/187 (70.59%), Postives = 160/187 (85.56%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQASD 561
+A E +VEKLA EMTQDYFDNLETMG+D++ FP AT++I ML++I L+D+G+AYPLDGDVYF+ E D++YG LS R I+EM+AGTRVE+ D+K+NPADFALWKKS+P EPAW+SPWG GRPGWHIECSAMS+K LG++ DIHGGGLDLMFPHHENE AQSECCTGK + +YW+HNGLMQA
Sbjct: 78 KANELGTTVEKLAKEMTQDYFDNLETMGVDSVDLFPYATEHIQEMLDMISDLVDKGHAYPLDGDVYFAVEQDDDYGKLSRRNIDEMLAGTRVESADQKRNPADFALWKKSKPNEPAWESPWGAGRPGWHIECSAMSKKHLGETLDIHGGGLDLMFPHHENELAQSECCTGKPFTKYWLHNGLMQAGS 264
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Match: A0A517ZV15_9PLAN (Cysteine--tRNA ligase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZV15_9PLAN) HSP 1 Score: 295 bits (756), Expect = 1.570e-95 Identity = 132/186 (70.97%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 1 RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQTLIDQGNAYPLDGDVYFSAESDNNYGCLSGRKIEEMIAGTRVEANDKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPHHENERAQSECCTGKTYVRYWVHNGLMQAS 558
RA E +VE LA EMTQDY+DNL+TMG++++ FP AT++I ML+II LI++ AYPL+GDVYFS ++D +YG LS R ++EM+AGTRVEAND+K+NPADFALWKKS+PGEPAW+SPWGPGRPGWHIECSAMS K LG++ DIHGGGLDLMFPHHENE AQSE CTGK + RYW+HNGLMQAS
Sbjct: 78 RANENGTTVEALAKEMTQDYYDNLKTMGVESVDLFPHATEHIQEMLDIISNLIEKDAAYPLEGDVYFSVDADEDYGKLSRRNVQEMMAGTRVEANDRKRNPADFALWKKSKPGEPAWESPWGPGRPGWHIECSAMSMKYLGETLDIHGGGLDLMFPHHENELAQSESCTGKPFARYWLHNGLMQAS 263 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115889.3302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115889.3302.1 >prot_M-pyrifera_M_contig115889.3302.1 ID=prot_M-pyrifera_M_contig115889.3302.1|Name=mRNA_M-pyrifera_M_contig115889.3302.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp RAAEKNISVEKLAAEMTQDYFDNLETMGIDTITDFPKATDYIDAMLEIIQback to top mRNA from alignment at M-pyrifera_M_contig115889:2..562- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115889.3302.1 ID=mRNA_M-pyrifera_M_contig115889.3302.1|Name=mRNA_M-pyrifera_M_contig115889.3302.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig115889:2..562- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115889:2..562- >mRNA_M-pyrifera_M_contig115889.3302.1 ID=mRNA_M-pyrifera_M_contig115889.3302.1|Name=mRNA_M-pyrifera_M_contig115889.3302.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig115889:2..562- (Macrocystis pyrifera P11B4 male)back to top |