mRNA_M-pyrifera_M_contig115887.3300.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A7X6ATV0_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ATV0_9ACTN) HSP 1 Score: 197 bits (500), Expect = 2.500e-59 Identity = 101/146 (69.18%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1 GSRENRTAAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGFVDGD*P 438
GSR T EL FGYR SA+ DLVL ARL+L+PGD GRAE+AEIVQWRR++QPGGQNAGSVFTNPEGDSAGRLI+ AG KG RIGTAEVS KHANFIQAD GRAADV +VM V +RV E+ G+ L ETHL+GF D + P
Sbjct: 167 GSRRWWTPDELDFGYRRSAITATDLVLAARLELSPGDRDAGRAELAEIVQWRRENQPGGQNAGSVFTNPEGDSAGRLIEAAGAKGLRIGTAEVSAKHANFIQADEGGRAADVLSVMTEVRRRVEEKCGVTLHPETHLLGFGDPEDP 312
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A358A3T9_9ACTN (UDP-N-acetylmuramate dehydrogenase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A3T9_9ACTN) HSP 1 Score: 181 bits (458), Expect = 1.220e-54 Identity = 95/146 (65.07%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 1 GSRENRTAAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGFVDGD*P 438
G R A EL YR SAL D+LV+G RL L+ GD G+AEMAEIVQWRRD+QPGGQNAGSVFTNP+GDSAGRLID AG KG R+GTAEVS KHANFIQAD G AADV VM V V G+ L+ ETHLVGF D + P
Sbjct: 48 GERRIVPAEELQLSYRQSALRTDELVVGCRLSLSSGDERKGKAEMAEIVQWRRDNQPGGQNAGSVFTNPDGDSAGRLIDTAGGKGLRVGTAEVSEKHANFIQADEGGTAADVLQVMIEVRTLVEYAHGVVLQPETHLVGFTDDEVP 193
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A2E8LAP6_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LAP6_9ACTN) HSP 1 Score: 180 bits (456), Expect = 7.480e-53 Identity = 94/146 (64.38%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 1 GSRENRTAAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGFVDGD*P 438
G R A EL YR SAL D+LV+G RL L+PGD G+AEMAEIVQWRRD+QPGGQNAGSVFTNP+G+SAGRLID AG KG R+GTAEVS KHANFIQAD G AADV VM V G+ L+ ETHLVGF D + P
Sbjct: 165 GERRIVPAEELQLSYRHSALRTDELVVGCRLSLSPGDERKGKAEMAEIVQWRRDNQPGGQNAGSVFTNPDGESAGRLIDTAGGKGLRVGTAEVSAKHANFIQADEGGTAADVLRVMIEARTLVEFAHGVVLQPETHLVGFTDDEVP 310
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A7Y2DS79_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DS79_9ACTN) HSP 1 Score: 176 bits (447), Expect = 2.140e-51 Identity = 89/137 (64.96%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 16 RTAAELAFGYRTSALGPDDLVLGARLQLA--PGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGF 420
R+A E FGYR S +GPDD+VL A L+L P A AE++EIV WRR HQPGGQNAGSVF NP GDSAGRLIDE GLKGFRIG+AEVS KHANFIQADP GRA DV A++ V + V +R G+EL+ E L+GF
Sbjct: 178 RSAEECGFGYRRSNIGPDDIVLFAELRLVRDPDRAAESSAELSEIVSWRRAHQPGGQNAGSVFANPPGDSAGRLIDECGLKGFRIGSAEVSAKHANFIQADPGGRADDVEALIQHVQRVVADRFGVELKVENRLIGF 314
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: UPI001D1014CF (UDP-N-acetylmuramate dehydrogenase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D1014CF) HSP 1 Score: 174 bits (440), Expect = 1.750e-50 Identity = 86/133 (64.66%), Postives = 103/133 (77.44%), Query Frame = 1
Query: 22 AAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGF 420
A++L YR+S + D +V+ A L+L PGD A G AE++EIV+WRR+HQPGGQNAGSVFTNPEGDSAGRLID AG +G RIGTAEVS KHANFIQAD G A DV A+M AV +RV + G+EL ET +VGF
Sbjct: 167 ASDLDLAYRSSNVRDDQVVVHADLRLRPGDVAAGEAELSEIVRWRREHQPGGQNAGSVFTNPEGDSAGRLIDAAGCRGLRIGTAEVSTKHANFIQADAGGSADDVFALMVAVARRVMDEHGVELHPETRMVGF 299
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A7X7HRH5_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HRH5_9ACTN) HSP 1 Score: 172 bits (437), Expect = 5.770e-50 Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 1
Query: 19 TAAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGF 420
T L GYR+S++ P +V A L LA G+ + +++EIV+WRRD+QPGGQNAGSVFTNP GDSAGRLID AG KG RIGTAEVSPKHANFIQADP G A DV+ +MD V +RV + TG+ L AET LVGF
Sbjct: 177 TPPMLELGYRSSSVVPHQVVAWAELDLASGNRSTSEDDLSEIVRWRRDNQPGGQNAGSVFTNPSGDSAGRLIDLAGCKGLRIGTAEVSPKHANFIQADPGGSADDVKRLMDEVARRVADATGVTLHAETRLVGF 310
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A3D5GK23_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5GK23_9ACTN) HSP 1 Score: 169 bits (428), Expect = 1.260e-48 Identity = 83/140 (59.29%), Postives = 104/140 (74.29%), Query Frame = 1
Query: 1 GSRENRTAAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGF 420
GS RTA EL GYRTS L P ++V+ RL L PGD G A ++E+V+WRR++QPGGQNAGSVFTNP+GDSAGRL++ AG +G R+GTAEVS +HANFIQAD G A DV A+M V ++V E G++L ET +VGF
Sbjct: 175 GSTVERTADELNLGYRTSTLEPGEIVVSVRLALEPGDRLDGEARLSEVVRWRRENQPGGQNAGSVFTNPDGDSAGRLVELAGCRGLRLGTAEVSSRHANFIQADEGGSADDVAALMTEVARQVAEVHGVDLVPETVMVGF 314
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A7Y2IG83_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IG83_9ACTN) HSP 1 Score: 168 bits (426), Expect = 3.080e-48 Identity = 89/144 (61.81%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 1 GSRENRTAAELAFGYRTSALGPDDLVLGARLQLAPGD--PAVGRA--EMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGF 420
G RTAA+L FGYR S +G DD+VL A L L+ + A+G E+ EIVQWRR +QPGGQNAGSVF NP GDSAGR+ID GLKGFRIG+A VS KHANFIQADP G A DV AV+ AV R+ ER G+ L+ E LVGF
Sbjct: 167 GGPSQRTAADLEFGYRQSTVGSDDVVLFAELLLSAEERSDAIGHGTRELTEIVQWRRANQPGGQNAGSVFANPPGDSAGRMIDACGLKGFRIGSASVSTKHANFIQADPGGSADDVAAVIAAVQARIDERFGVRLQVENRLVGF 310
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A538HGK2_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HGK2_9ACTN) HSP 1 Score: 167 bits (424), Expect = 3.120e-48 Identity = 83/141 (58.87%), Postives = 98/141 (69.50%), Query Frame = 1
Query: 1 GSRENRTAAELAFGYRTSALGPDDLVLGARLQLAPGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGFV 423
G+ AEL GYR S++ PD +VL A L GD AE+A IV+WRR+HQPGG NAGSVFTNP GDSAGRLID AGLKG R+G+A VSPKHANF QAD DG A DVRA++D V + V ER G+ L E ++GF
Sbjct: 156 GAETEIAGAELVLGYRRSSVTPDQVVLWAEFGLREGDREASEAEVAGIVRWRREHQPGGANAGSVFTNPSGDSAGRLIDAAGLKGHRVGSAVVSPKHANFFQADEDGSADDVRALIDEVRRLVEERMGVLLEPELRMIGFT 296
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Match: A0A7Y2DB40_9ACTN (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DB40_9ACTN) HSP 1 Score: 168 bits (426), Expect = 3.330e-48 Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 28 ELAFGYRTSALGPDDLVLGARLQL--APGDPAVGRAEMAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSPKHANFIQADPDGRAADVRAVMDAVVQRVRERTGIELRAETHLVGFVD 426
+LAFGYR SA+ +V+ +L+L + G G A ++EIV+WRR+HQPGGQNAGSVFTNPEGDSAGRLID AG KG R+G+AEVS KHANFIQADPDG A DV A+M A++ RV E +G+ L ET LVGF +
Sbjct: 176 QLAFGYRCSAIAAHHIVVQVQLELEVSGGGVEAGEAALSEIVRWRREHQPGGQNAGSVFTNPEGDSAGRLIDAAGGKGLRVGSAEVSTKHANFIQADPDGSADDVVALMRAIMTRVHEHSGVRLHPETVLVGFPE 310 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115887.3300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115887.3300.1 >prot_M-pyrifera_M_contig115887.3300.1 ID=prot_M-pyrifera_M_contig115887.3300.1|Name=mRNA_M-pyrifera_M_contig115887.3300.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp MAEIVQWRRDHQPGGQNAGSVFTNPEGDSAGRLIDEAGLKGFRIGTAEVSback to top mRNA from alignment at M-pyrifera_M_contig115887:1..559- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115887.3300.1 ID=mRNA_M-pyrifera_M_contig115887.3300.1|Name=mRNA_M-pyrifera_M_contig115887.3300.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=559bp|location=Sequence derived from alignment at M-pyrifera_M_contig115887:1..559- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115887:1..559- >mRNA_M-pyrifera_M_contig115887.3300.1 ID=mRNA_M-pyrifera_M_contig115887.3300.1|Name=mRNA_M-pyrifera_M_contig115887.3300.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig115887:1..559- (Macrocystis pyrifera P11B4 male)back to top |