Homology
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A7V8V2M6_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V2M6_9BACT)
HSP 1 Score: 147 bits (371), Expect = 1.200e-43
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1
Query: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDPRV 216
MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDPRV
Sbjct: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDPRV 72
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A7C4UKF7_9BACT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4UKF7_9BACT)
HSP 1 Score: 66.2 bits (160), Expect = 5.010e-11
Identity = 37/73 (50.68%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAE---TSDLTEALTRLEQQPPPAIVDP 210
M L +S TF + +FHGR GG EWPP PLRLFQ L+A + + T D T+AL LEQQ PAIV P
Sbjct: 1 MPAYLCLSVTFHDERFHGRRDGGQPEWPPSPLRLFQALVAAAEAAVRAGGLTDDPTDALRWLEQQGSPAIVAP 73
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A2T6DGL1_9BACT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Verrucomicrobia bacterium LW23 TaxID=2161867 RepID=A0A2T6DGL1_9BACT)
HSP 1 Score: 63.9 bits (154), Expect = 3.300e-10
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTE---ALTRLEQQPPPAIVDPRV 216
M L I+ FL +HGRA GG+ EWPP PLRLFQ L+A +A E L AL LE Q PP IV P +
Sbjct: 1 MTKYLSIAVRFLQGMYHGRADGGEPEWPPSPLRLFQALVAAAAARANERELLQSGAPALLWLEDQAPPLIVAPAI 75
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A3A4JXW0_9DELT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3A4JXW0_9DELT)
HSP 1 Score: 59.3 bits (142), Expect = 1.400e-8
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 1
Query: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDP 210
M Y++ FLNP FHGR GG+ EWPP P+R+FQ L+A A + + L LE PP I+ P
Sbjct: 1 MPSHFYLTIRFLNPAFHGRKDGGEPEWPPSPMRMFQALVA--AAHRTDATLFVSVLEWLENLYPPIILAP 68
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
D5STD6_PLAL2 (CRISPR-associated protein, GSU0054 family n=1 Tax=Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / Mu 290) TaxID=521674 RepID=D5STD6_PLAL2)
HSP 1 Score: 57.8 bits (138), Expect = 4.890e-8
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 13 LYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLT---EALTRLEQQPPPAIV 204
L ++ P FHG+ GG+ EWPP PLRL+Q L+A +A + + + +AL LE+QP PAI+
Sbjct: 4 LCLTVRLHQPLFHGQRDGGEPEWPPSPLRLYQSLVAAAAAQTPDGDPMAVAGDALQWLERQPAPAII 70
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A8E6B2R3_9BACT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Telmatocola sphagniphila TaxID=1123043 RepID=A0A8E6B2R3_9BACT)
HSP 1 Score: 57.4 bits (137), Expect = 6.660e-8
Identity = 33/71 (46.48%), Postives = 40/71 (56.34%), Query Frame = 1
Query: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLT---EALTRLEQQPPPAIV 204
M L ++ +L P HGR AGG+ EWPP PLRLFQ L+A +A E L AL LE +P P IV
Sbjct: 1 MKTQLCVTIRYLQPLSHGRGAGGEPEWPPTPLRLFQALVAAAAARWNERMVLAYAVPALRWLEGRPFPIIV 71
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A225D8L2_9BACT (CRISPR-associated protein Csb2 n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225D8L2_9BACT)
HSP 1 Score: 54.7 bits (130), Expect = 5.970e-7
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 1 MADALYISATFLNPQ--FHGRAAGGDAEWPPLPLRLFQDLIAGSA 129
M+D L + FL+P+ FHG+ GG+AEWPP PLRLFQ LI +A
Sbjct: 1 MSDVLNFTVRFLDPEPSFHGKRDGGEAEWPPSPLRLFQALIDAAA 45
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A6P2D2E0_9BACT (Uncharacterized protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2D2E0_9BACT)
HSP 1 Score: 54.3 bits (129), Expect = 8.180e-7
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 19 ISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSA-----DEIAETSDLTEALTRLEQQPPPAIV 204
I+ FL P HGR GG+ EWPP PLR+FQ L+A SA ++AE + AL L +QP P +V
Sbjct: 7 ITIRFLQPFSHGRGDGGEPEWPPSPLRVFQALVAASAAYWRDHQLAEYAG--PALEWLAKQPAPVLV 71
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
A0A142XGY4_9BACT (CRISPR-associated protein n=1 Tax=Gemmata sp. SH-PL17 TaxID=1630693 RepID=A0A142XGY4_9BACT)
HSP 1 Score: 53.5 bits (127), Expect = 1.530e-6
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETS 150
M + L ++ F +P F GR GG+ EWPP PLR+FQ L+A SA + S
Sbjct: 1 MPNYLCVTIRFADPTFRGRGDGGEPEWPPSPLRVFQALVAASAARFGDPS 50
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match:
UPI001C84A6B6 (type I-U CRISPR-associated protein Csb2 n=1 Tax=Desulfuromonas versatilis TaxID=2802975 RepID=UPI001C84A6B6)
HSP 1 Score: 52.0 bits (123), Expect = 5.350e-6
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 13 LYISAT--FLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSA--DEIAETSDLTEALTRLEQQPPPAIVDP 210
+Y + T FL+ +FHGR GG+ EWPP PLR+FQ L+A +A + A + + AL L+ Q P I+ P
Sbjct: 3 MYFALTIDFLDCRFHGRRDGGEPEWPPSPLRVFQALVAAAARMNGGALSDGDSAALQWLQAQTAPVIIAP 72
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 10
0 1 Expect = 1.20e-43 / Id = 100.00 Expect = 5.01e-11 / Id = 50.68 Expect = 3.30e-10 / Id = 48.00 Expect = 1.40e-8 / Id = 42.86 Expect = 4.89e-8 / Id = 41.79 Expect = 6.66e-8 / Id = 46.48 Expect = 5.97e-7 / Id = 55.56 Expect = 8.18e-7 / Id = 46.27 Expect = 1.53e-6 / Id = 46.00 Expect = 5.35e-6 / Id = 42.86 Sequence A0A7V8V2M6_9BACT A0A7C4UKF7_9BACT A0A2T6DGL1_9BACT A0A3A4JXW0_9DELT D5STD6_PLAL2 A0A8E6B2R3_9BACT A0A225D8L2_9BACT A0A6P2D2E0_9BACT A0A142XGY4_9BACT UPI001C84A6B6
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101583.329.1
>prot_M-pyrifera_M_contig101583.329.1 ID=prot_M-pyrifera_M_contig101583.329.1|Name=mRNA_M-pyrifera_M_contig101583.329.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp
MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETS DLTEALTRLEQQPPPAIVDPRV back to top mRNA from alignment at M-pyrifera_M_contig101583:452..667+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101583.329.1 ID=mRNA_M-pyrifera_M_contig101583.329.1|Name=mRNA_M-pyrifera_M_contig101583.329.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=216bp|location=Sequence derived from alignment at M-pyrifera_M_contig101583:452..667+ (Macrocystis pyrifera P11B4 male)ATGGCTGACGCGCTTTATATTTCGGCGACCTTTCTCAATCCCCAATTTCA
TGGACGGGCCGCTGGTGGTGATGCCGAATGGCCTCCTTTGCCACTGCGGC
TATTTCAGGACTTGATTGCCGGCAGTGCTGACGAAATTGCCGAGACTTCT
GATTTGACCGAGGCATTGACCAGGTTAGAGCAGCAACCACCACCGGCAAT
TGTCGATCCACGCGTA back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101583:452..667+
>mRNA_M-pyrifera_M_contig101583.329.1 ID=mRNA_M-pyrifera_M_contig101583.329.1|Name=mRNA_M-pyrifera_M_contig101583.329.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig101583:452..667+ (Macrocystis pyrifera P11B4 male) ATGGCTGACGCGCTTTATATTTCGGCGACCTTTCTCAATCCCCAATTTCA TGGACGGGCCGCTGGTGGTGATGCCGAATGGCCTCCTTTGCCACTGCGGC TATTTCAGGACTTGATTGCCGGCAGTGCTGACGAAATTGCCGAGACTTCT GATTTGACCGAGGCATTGACCAGGTTAGAGCAGCAACCACCACCGGCAAT TGTCGATCCACGCGTAATGGCTGACGCGCTTTATATTTCGGCGACCTTTC TCAATCCCCAATTTCATGGACGGGCCGCTGGTGGTGATGCCGAATGGCCT CCTTTGCCACTGCGGCTATTTCAGGACTTGATTGCCGGCAGTGCTGACGA AATTGCCGAGACTTCTGATTTGACCGAGGCATTGACCAGGTTAGAGCAGC AACCACCACCGGCAATTGTCGATCCACGCGTA back to top