mRNA_M-pyrifera_M_contig101580.326.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A6B1AWD2_9ACTN (ComEA family DNA-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWD2_9ACTN) HSP 1 Score: 174 bits (440), Expect = 5.060e-52 Identity = 98/152 (64.47%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 19 SAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGAGAD-GSSTSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 ++E++ IVVH++GAVA PGVHEL G+RV DAI+A GL DADR R+NLAA L+DGQR WVP LGE EPAVV A AD G S PVNLNT D ALETLPGIGPSIA AI+ HR G F+RVE LLEV GIG +L QLEPLV V Sbjct: 73 ASEASGRIVVHIEGAVALPGVHELAAGSRVHDAIDAADGLTADADRSRINLAAQLADGQRVWVPALGEPEPAVV--NMAAAADPGGSGGAPVNLNTGDLQALETLPGIGPSIAAAIIRHRREHGAFSRVEALLEVPGIGQAKLEQLEPLVTV 222
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A6N9EVN7_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EVN7_9ACTN) HSP 1 Score: 172 bits (435), Expect = 3.670e-51 Identity = 91/160 (56.88%), Postives = 111/160 (69.38%), Query Frame = 1 Query: 1 PSPGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGAGADGS---STSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 P PGP+ IVV V GAVARPG+HELP +RV DA+EA GGL +ADR RLNLA PLSDG R WVP +GE +VP + DGS + P+N+N AD AALE LPGIGP++A AI+EHR R GPFA V++L+EV+GIGP +L Q+ PL V Sbjct: 68 PVPGPSPMPDPGRIVVDVVGAVARPGLHELPATSRVADAVEAAGGLTAEADRMRLNLAEPLSDGSRLWVPAVGESAGPEIVPVTAGAGDGSRAGAAGAPLNVNIADAAALEELPGIGPALAVAIVEHRRRSGPFATVDELVEVSGIGPVKLEQIRPLATV 227
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A6N8YBX8_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YBX8_9ACTN) HSP 1 Score: 169 bits (429), Expect = 3.640e-50 Identity = 93/164 (56.71%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 1 PSPGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGA-------GADGSSTSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 P P P S A IVV V GAVARPG+HELP +R+ DA+EA GGL DADR RLNLA PLSDG R WVP +GE VVP + GA G +N+NTAD ALE LPGIGP++A AI+EHR R GPFA V++L+EV+GIGPT+L Q+ PL V Sbjct: 71 PIPAPLSVPDPARIVVDVVGAVARPGLHELPAASRIADAVEAAGGLTADADRMRLNLAEPLSDGSRLWVPAVGEGAGPEVVPLTAGTSDAGRVGAGGGRAGARLNVNTADAVALEELPGIGPALAGAIVEHRRRSGPFATVDELVEVSGIGPTKLEQIRPLATV 234
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A7K2AUN1_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2AUN1_9ACTN) HSP 1 Score: 167 bits (424), Expect = 1.740e-49 Identity = 91/160 (56.88%), Postives = 110/160 (68.75%), Query Frame = 1 Query: 1 PSPGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGAGADGS---STSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 P PGP+ A IVV V GAV RPG+HELP +RV DA+EA GGL +ADR RLNLA PL DG R WVP +GE VVP + DGS + +N+NTAD AALE LPGIGP++A AI+EHR R GPFA V++L+EV+GIGP +L Q+ PL V Sbjct: 69 PVPGPSXMPDPARIVVDVVGAVVRPGLHELPATSRVADAVEAAGGLTAEADRMRLNLAEPLLDGARLWVPEVGESAGPEVVPVTAGTGDGSRAGAAGARLNVNTADAAALEELPGIGPALAVAIVEHRRRSGPFATVDELVEVSGIGPVKLEQIRPLATV 228
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A3M2GBG5_ACTSX (Uncharacterized protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GBG5_ACTSX) HSP 1 Score: 165 bits (418), Expect = 1.720e-48 Identity = 87/157 (55.41%), Postives = 110/157 (70.06%), Query Frame = 1 Query: 1 PSPGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGAGADGSSTSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 P+ P ++ +VVHVDGAV RPG+HELP G+RV DA+ A GGL DADR R+NLAAP+ DG R W+P GEE V+ + AG + ++GPV++NTAD A LE+LPGIGP+IA AI+E R G FA V++L+EV GIGPTRL L LV V Sbjct: 81 PTIAPPTSTRPPALVVHVDGAVNRPGLHELPAGSRVADAVRAAGGLTDDADRTRINLAAPVLDGSRVWIPTRGEEAAPPVLTGATAGTGAAGSAGPVDVNTADPATLESLPGIGPTIAAAIVETRTDRGGFASVDELVEVPGIGPTRLEALRDLVTV 237
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A7K2E3I4_9ACTN (ComEA family DNA-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E3I4_9ACTN) HSP 1 Score: 164 bits (414), Expect = 6.740e-48 Identity = 90/162 (55.56%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 7 PGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEE-PAVVVPESGAGADGSSTSG------PVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 P P+ + IVV V GAVARPG+HELP +RV DA+EA GGL +ADR RLNLA PLSDG R WVP +G+ P VV +GAG G + +G P+N+NTAD AALE LPGIGP++A AI+EHR + GPF VE+L+EV+GIGP +L ++ PL V Sbjct: 73 PAPSPMPDSGRIVVDVVGAVARPGLHELPATSRVADAVEAAGGLTAEADRLRLNLAEPLSDGARLWVPEVGQPAGPEVVAVTAGAGDGGRAGAGGGRPGAPLNVNTADAAALEELPGIGPALAAAIVEHRRQSGPFTTVEELVEVSGIGPAKLERIRPLATV 234
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A6B1E9E8_9ACTN (ComEA family DNA-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E9E8_9ACTN) HSP 1 Score: 160 bits (406), Expect = 1.250e-46 Identity = 89/155 (57.42%), Postives = 109/155 (70.32%), Query Frame = 1 Query: 16 TSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPE-SGAGADG------SSTSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEP 459 T+A A IVV V GAV RPGVHELP G+RV DAI+A GG ADR RLNLA P++DG R WVP +GE +VP G+G G S SG V++NTAD A+LE+LPGIGPS+A AI+EHR R GPFA V+DL++V+GIGP +L Q+ P Sbjct: 81 TTASEPARIVVDVVGAVVRPGVHELPAGSRVTDAIDAAGGFTTGADRIRLNLAQPVADGSRVWVPAIGEPTGPDLVPVIGGSGGTGVAEGGRESGSGTVDINTADAASLESLPGIGPSLAAAIVEHRKRHGPFAAVDDLIDVSGIGPAKLEQIRP 235
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A7X7D834_9ACTN (ComEA family DNA-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D834_9ACTN) HSP 1 Score: 150 bits (380), Expect = 3.200e-42 Identity = 87/160 (54.37%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 7 PGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGAGA------DGSSTSGPV--NLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPL 462 P TSAE+ A +VVH GAVA PGV+ +P G+RV D I A GGLA DAD +R+NLAAPL DG+R WVP GE E VV GA +G+ SG V +LNTA LE+LPG+GP+ A AI++HR R GPFA V+DL+EV GIG +L Q+ PL Sbjct: 122 PAETSAETPAELVVHASGAVASPGVYRVPAGSRVDDLIRAAGGLALDADVDRVNLAAPLVDGERIWVPRRGEVEVPDVVAGGAGGATGPGAPNGADQSGDVVIDLNTATAEELESLPGVGPATAAAILDHRERNGPFASVDDLIEVRGIGEAKLEQIRPL 281
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A3C2AZR5_9ACTN (Competence protein ComEA n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AZR5_9ACTN) HSP 1 Score: 149 bits (377), Expect = 3.300e-42 Identity = 82/151 (54.30%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 40 IVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVV------VPESGAGADGS-STSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 +VVHV GAV PGV+ + GARVVDAIE GGLA DAD + +NLAAP+ DG+R +VP +G+ P+VV VP G DGS + SGP+N+NTA A LE LPG+GP+ A AI+ HR GPF+ V+DL +VAGIGP +L + LV V Sbjct: 96 LVVHVAGAVVAPGVYRVSDGARVVDAIEVAGGLAADADLDAVNLAAPIRDGERLYVPRVGQPVPSVVTGGGGGVPPGEGGGDGSVAPSGPININTATAAELEALPGVGPATAAAIVAHRDEHGPFSTVDDLTDVAGIGPAKLEAVRGLVTV 246
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Match: A0A349B4N1_9ACTN (Competence protein ComEA n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B4N1_9ACTN) HSP 1 Score: 146 bits (369), Expect = 2.580e-41 Identity = 81/152 (53.29%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 16 TSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDADRERLNLAAPLSDGQRAWVPWLGEEEPAVVVPESGAGADGSSTSGPVNLNTADQAALETLPGIGPSIATAIMEHRAREGPFARVEDLLEVAGIGPTRLAQLEPLVAV 471 T+ +A +VVHV GAV PGVH+LP G+RV+DA++A GGL DAD +NLAA + DG + +VP +GE V P G DG+ GPV+LN AD LETLPGIGP+ A AI+EHR R GPF V+ LL V GIG +LA L LV V Sbjct: 74 TTTTTAGPVVVHVAGAVVAPGVHQLPPGSRVIDAVDASGGLTPDADAGAVNLAAEVVDGSQVYVPRVGE-----VPPPXXXGPDGAVDDGPVDLNAADATLLETLPGIGPATAAAIVEHRERHGPFTTVDGLLAVRGIGEAKLAALRDLVRV 220 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101580.326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101580.326.1 >prot_M-pyrifera_M_contig101580.326.1 ID=prot_M-pyrifera_M_contig101580.326.1|Name=mRNA_M-pyrifera_M_contig101580.326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp PSPGPTSAESAATIVVHVDGAVARPGVHELPTGARVVDAIEAGGGLAGDAback to top mRNA from alignment at M-pyrifera_M_contig101580:53..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101580.326.1 ID=mRNA_M-pyrifera_M_contig101580.326.1|Name=mRNA_M-pyrifera_M_contig101580.326.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig101580:53..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101580:53..526+ >mRNA_M-pyrifera_M_contig101580.326.1 ID=mRNA_M-pyrifera_M_contig101580.326.1|Name=mRNA_M-pyrifera_M_contig101580.326.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig101580:53..526+ (Macrocystis pyrifera P11B4 male)back to top |