mRNA_M-pyrifera_M_contig11539.3198.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A6H5JND9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JND9_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 5.520e-141 Identity = 202/301 (67.11%), Postives = 244/301 (81.06%), Query Frame = 1
Query: 1 IFDSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
+ D S+VG +V++ASVTLM VL +SE L +IKVDTSSHMAVADF++HDAVTARLH TFP++ C+DLEVV DHP GG+ N+ AV+V RPAS+ +R PF +GG GCTLDGTV VERAAGTI++ +++HDPSRVI FL T+GE R+G K VAGQN+TH IHDFGFGPP+ G VG GRNSLA + FV+ GSGLVKYSLKVVPI H RM+ AEV THTYS+NVAFV EA ++D+++ L LGVEFSYDF VMV+YTDTR+SM E ITSVCAI+GG++TVSGL VRG+Q VS KKHD
Sbjct: 20 VLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKTERYPFQPQGGGLGCTLDGTVTVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEAGSGLVKYSLKVVPIFHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 320
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7S2UYF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF2_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.760e-34 Identity = 89/300 (29.67%), Postives = 159/300 (53.00%), Query Frame = 1
Query: 7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFND--HDAVTARLHVTFPYIGCEDLEVVADHPLGGLGN------TAAVAVDLRPASRVDRKPFPQKGGMS---GCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIE-GSGLVKYSLKVVPISHERMYRAEVKTH-TYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLV 867
+ + G +V++AS+ +M +L +SE ++ KVD SHM V+ + LH+TFP++ CEDL++ ++ GG +++ +D+R + + F + CT++G++++ R G+I + L + + T A+ G NV+H IH+ FG + G + + A++ GSGL +Y +K+VP ++E ++ VK H YS FV ++ + ++ LG+E SYDF+P+MV Y + ++S+ +F+T++CAI+GGV T S LLV
Sbjct: 22 EKTTAGAVVSIASLAIMALLLISEIWLYFKVDVVSHMGVSHLKEGMEQPFDVHLHITFPHMRCEDLDLRVENLKGGDAADVMKMLSSSKTLDMRQSKPNEVVLFKDEARFKMNETCTVEGSLKLPRVGGSIDIASRRKPVDIASLLSALFLNT---AQLGNV----PNVSHVIHELWFGDKILGGDQMAGSLPLKDACNAVDHGSGLFRYEVKIVPTTYEWLHTHRVKEHYQYSVVENFVKDSAGISSLST----LGLEISYDFSPIMVEYVEQKQSIFQFLTNLCAIMGGVFTTSSLLV 310
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7S2AXB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB8_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.720e-28 Identity = 94/287 (32.75%), Postives = 142/287 (49.48%), Query Frame = 1
Query: 22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAV-ADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQI-LNHDPSRVILK--NGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAI--AVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLL 864
G I+T+AS TL+V+L SE L+F V T HM V + D +V LH TFP++ C+ + + G P V G GC+L G + V + G + + PS +L+ +G + AT G+ + G N++HTIH FGP G N L V G ++ +KV+P ++ + R+ V ++ YS + FV + A+K +AP G+ F YDF PVMV Y + + S+L+F+T +C IIGG+ TVSGL+
Sbjct: 25 GAILTLASSTLIVLLCFSELLVFSSVKTVHHMTVDSAAADRPSVRISLHATFPHLACDSTNLEVEATRGD------------PTMDVVNSIVKTPVGEGGCSLKGELLVGKVGGNFHISTGMAGLPSSPMLQLSSGLMSAT---GLMGSFK--GVNMSHTIHHLSFGPKFPGRS----NPLEEVTNVVSTDVGQYQFHIKVIPTVYKYLRRSPVYSNQYSLSEQFVKLDLMSALKASSAP----GIFFYYDFYPVMVEYDEEKVSILQFLTRICGIIGGIFTVSGLI 286
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7R9U8G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8G4_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.470e-26 Identity = 86/316 (27.22%), Postives = 143/316 (45.25%), Query Frame = 1
Query: 22 GGIVTVASVTLMVVLFLSE-TLMFIKVDTSSHMAV-ADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMS---------------------GCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKH 900
GG T+ + ++V L L E FI +D SHM+V A + V +H+TFP++ C++++V ADH G G A + R + +PF + G + GC+++G V + AG + + P ++N ++A V N++H IH FGP S G ++L G + EG +Y++++VP R ++T+ YS V + V T+ + H GV F Y+F+P+ V Y R ++ F+TS+C +IGG + + + RKKH
Sbjct: 21 GGFFTLCTALVLVALLLLEFQRSFIALDAESHMSVDAPATAREFVDVHVHITFPWMPCDEMDVHADHNKGETGFLTQEAFEKRVPREAELRPFRKALGKAFQYPLQVERADNRRQSRETIYGCSIEGRAMVPKVAGDLHFWVPK--PRVSSMENLGVLAAMFPGLVQVDAVP-HNISHAIHSLSFGP----SFGFMSSALEGEINIITEGLAQYQYNIQLVPTRIRNNGRVSLQTNQYS--VTEDDMVLDVMSATSDRYHPGVYFYYEFSPISVEYHRNRGGVMGFLTSLCGLIGGALAILRFIDTFAHRLLRKKH 327
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: B8BZR7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZR7_THAPS) HSP 1 Score: 111 bits (278), Expect = 7.800e-25 Identity = 99/330 (30.00%), Postives = 155/330 (46.97%), Query Frame = 1
Query: 7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVAD------FNDHDA-------VTARLHVTFPYIGCEDLEVVADHPLGGLG-----NTAAVAVDLRPASRVDRKPFPQKG-------GMSGCTLDGTVEVERAAGTILVQILNHDPSRV--ILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSG--LVKYSLKVVPISHERMYRAEVKTHTYSANVAFVG-EAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHT----VSGLLVRGIQGVSRK 894
+ SV GG +T+ + +LFLS+ +++I+VDT M +A+ FN + R+HVTFP++ C+ L+ D G ++A R + +D K G GCTL GT++V R GT+ + + R IL G + + G NVTH +HD FG P G N L G V GSG L ++K+VP +++R + +T+ S + V E +A + T L G+ +YDF P+ VR+ ++R++ L F++S+ I+GGV VSG LV Q V++K
Sbjct: 18 ERSVSGGFITLLASITAALLFLSQIILYIQVDTRHSMHLAESVPSALFNKSPQNILSGHQIPLRVHVTFPHLPCKALDYSQDGNSESTGKFEHYHSAPYTFTKRVPTVIDYKKAAVSGFKDVNTARRQGCTLVGTIKVPRVGGTMSISVSPEAWRRATSILSFGVDLGKDQDMFHGKL----PNVTHYVHDITFGDPFP----PGSNPLKGVHHVMDNGSGVALANVAVKLVPTTYKRTIYSAKETYQASVSRHIVQPETLAAQRST---LLPGLMLTYDFTPLAVRHVESRENWLVFLSSLVGIVGGVFVTVGLVSGCLVNSAQAVAKK 336
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7S1CC96_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC96_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.820e-24 Identity = 85/297 (28.62%), Postives = 133/297 (44.78%), Query Frame = 1
Query: 22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQ--KGGMS-GCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLH-------------LGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLL 864
G ++T A L V L ++E ++ + H+ V D + L++ FP++ C DL V G +LR +++ PFP KG + GC + GT V + AG I ++ G G R G A N +H I FG P G V +L G + +Y ++ VP +E + A + +H YSA V DV AP + GV F ++F+PVMVR +T++++L+F+TS+CAI+GGV TV+G++
Sbjct: 22 GAVLTAAFAALSVALVVNEASLWATTEVEDHLRV-DAGVSMPLDVALNIAFPHVRCRDLRVTVSDARG------LTYAELRV--NLEKTPFPDADKGDQAPGCVVAGTATVRKVAGLINIEA------------GAAAQIPGFRRDGD--TAALNTSHVIRKLSFGDPFPGMV----EALGGFTSPPRDKPARYQYFIQAVPTVYEPLRGARIASHQYSATKF-------VTDVEAPDANDFEAIMMGGGVQPAGVYFKFEFSPVMVRVVETKRTVLQFLTSICAIVGGVFTVAGMV 284
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A6G0WYB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYB9_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.940e-24 Identity = 85/299 (28.43%), Postives = 133/299 (44.48%), Query Frame = 1
Query: 7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
+ + VG ++TV SV + ++LFLSE M+ + + M V + + ++F + C D+ + A G G L S + P +G GC G+V+V + AG+ V + + FL N +H +H FGP + V N L + L KYSL VVP + +Y + ++T+ YS + E ++ P GV F Y+F+P+ V Y +T+ S L+FITS CAI+GGV V+ +L I VS +K D
Sbjct: 20 EKTAVGAVITVLSVAVALLLFLSELNMYTTTEVVNRMYVDTMPQDTIMHIEVDISFLHEKCSDVSMDASDSKGNKG--------LLSDSNIASVPIGAEG--EGCRFTGSVDVHKIAGS--VSFAHEGSLNMFSFMDFLQF---------------NSSHIVHRLTFGPEIPNMV----NPLENVHKTVEKNVALYKYSLSVVPTQYTPLYGSPIQTYQYSVT-EYTSEPHDGGTLSFP----GVSFMYEFSPIKVEYIETKPSFLQFITSTCAILGGVFAVARILDSIIYSVSSRKLD 282
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A1W0A9T6_9STRA (Endoplasmic reticulum-Golgi intermediate compartment protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9T6_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.530e-22 Identity = 86/295 (29.15%), Postives = 137/295 (46.44%), Query Frame = 1
Query: 22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVT-ARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
G I+T+ S+ ++++LFLSE ++ + ++ M V D + D V + +TF + C D+ + A G N + + D +P + GC G V++++ AG I H+ S + FL N +H +H FGP S+ N N L V IE L KY + +VP + +Y + V+T+ YS V E + + GV FSY+F+P+ V Y +T+ S L+F+TS CAI+GGV V+ +L + VS K D
Sbjct: 25 GAIITLTSLVVVLLLFLSELGIYTTTEVANRMYV-DVDPQDTVMHVEVDITFLHEPCSDVAMDASDTKG---NREVIV-------QSDVVAYPLEDEKEGCRFKGFVDLKKIAGDINFA---HEGSLNMFT--FL------------EFLDFNSSHIVHSLRFGP----SIPNMVNPLENVHKVVIENFKLYKYRISIVPTQYTPLYGSPVQTYQYS-----VTEHASDPNENGRFSFPGVAFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGFVYSVSAHKVD 282
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: W4G1C2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1C2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.030e-20 Identity = 84/308 (27.27%), Postives = 132/308 (42.86%), Query Frame = 1
Query: 22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVG-----------NGRNSLAGNKFVA---IEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
G I+TV SV ++++LFLSE ++ + + M V + + +TF + C D+ + A G DL S + P GC L GTV+V + AG +V + + + FL N +H +H FGP + V NGR + F+ + L KY L +VP H +Y V+T+ YS + E ++ P GV F Y+F+P+ V Y +++ S L+F+TS AI+GGV V+ ++ I VS +K D
Sbjct: 25 GAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQDAVMRIEVDITFLHEKCADVAMDASDIKGNK--------DLLSDSNIAAVPVVSDES-EGCRLTGTVDVHKVAG--VVSFAHAGSLNMFSFSDFLEF---------------NSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYSVT-EYTSEPSEEGALSFP----GVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKMD 301
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A024UDA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDA9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 5.500e-20 Identity = 78/299 (26.09%), Postives = 129/299 (43.14%), Query Frame = 1
Query: 7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
+ + G ++TV SV ++ +LFLSE ++ + M V + + +TF + C+D+ + A G DL S + P P G GC L G V+V + AG +V + + FL N +H +H FGP + V N L + L KY + +VP + +Y ++T+ YS + E ++ P GV F Y+F+P+ V Y +++ S L+F+TS AI+GGV V+ ++ I +S +K D
Sbjct: 20 EKTTCGALITVISVAIVFLLFLSELGIYTTTQVVNRMHVDTVPQDAVMHIEVDITFLHEKCKDVAMDASDVKGNK--------DLLADSNITAVPVPS-GESEGCRLTGFVDVHKVAG--VVSFAHEGSLNMFSFMDFLEF---------------NASHIVHRLSFGPDIPNMV----NPLQDVHKSVEKNVALYKYGVSIVPTQYTPLYGPPIQTYQYSVT-EYTSEPNEGGVMSFP----GVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSVIYSMSSRKLD 283 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11539.3198.1 >prot_M-pyrifera_M_contig11539.3198.1 ID=prot_M-pyrifera_M_contig11539.3198.1|Name=mRNA_M-pyrifera_M_contig11539.3198.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=302bp IFDSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVback to top mRNA from alignment at M-pyrifera_M_contig11539:4492..7357- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11539.3198.1 ID=mRNA_M-pyrifera_M_contig11539.3198.1|Name=mRNA_M-pyrifera_M_contig11539.3198.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2866bp|location=Sequence derived from alignment at M-pyrifera_M_contig11539:4492..7357- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11539:4492..7357- >mRNA_M-pyrifera_M_contig11539.3198.1 ID=mRNA_M-pyrifera_M_contig11539.3198.1|Name=mRNA_M-pyrifera_M_contig11539.3198.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1812bp|location=Sequence derived from alignment at M-pyrifera_M_contig11539:4492..7357- (Macrocystis pyrifera P11B4 male)back to top |