mRNA_M-pyrifera_M_contig11539.3198.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11539.3198.1
Unique NamemRNA_M-pyrifera_M_contig11539.3198.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A6H5JND9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JND9_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 5.520e-141
Identity = 202/301 (67.11%), Postives = 244/301 (81.06%), Query Frame = 1
Query:    1 IFDSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
            + D S+VG +V++ASVTLM VL +SE L +IKVDTSSHMAVADF++HDAVTARLH TFP++ C+DLEVV DHP GG+ N+ AV+V  RPAS+ +R PF  +GG  GCTLDGTV VERAAGTI++ +++HDPSRVI    FL  T+GE R+G K VAGQN+TH IHDFGFGPP+ G VG GRNSLA + FV+  GSGLVKYSLKVVPI H RM+ AEV THTYS+NVAFV EA  ++D+++  L LGVEFSYDF  VMV+YTDTR+SM E ITSVCAI+GG++TVSGL VRG+Q VS KKHD
Sbjct:   20 VLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKTERYPFQPQGGGLGCTLDGTVTVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEAGSGLVKYSLKVVPIFHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 320          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7S2UYF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.760e-34
Identity = 89/300 (29.67%), Postives = 159/300 (53.00%), Query Frame = 1
Query:    7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFND--HDAVTARLHVTFPYIGCEDLEVVADHPLGGLGN------TAAVAVDLRPASRVDRKPFPQKGGMS---GCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIE-GSGLVKYSLKVVPISHERMYRAEVKTH-TYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLV 867
            + +  G +V++AS+ +M +L +SE  ++ KVD  SHM V+   +         LH+TFP++ CEDL++  ++  GG         +++  +D+R +   +   F  +        CT++G++++ R  G+I +           L +   + T   A+ G       NV+H IH+  FG  + G      +    +   A++ GSGL +Y +K+VP ++E ++   VK H  YS    FV ++  +  ++     LG+E SYDF+P+MV Y + ++S+ +F+T++CAI+GGV T S LLV
Sbjct:   22 EKTTAGAVVSIASLAIMALLLISEIWLYFKVDVVSHMGVSHLKEGMEQPFDVHLHITFPHMRCEDLDLRVENLKGGDAADVMKMLSSSKTLDMRQSKPNEVVLFKDEARFKMNETCTVEGSLKLPRVGGSIDIASRRKPVDIASLLSALFLNT---AQLGNV----PNVSHVIHELWFGDKILGGDQMAGSLPLKDACNAVDHGSGLFRYEVKIVPTTYEWLHTHRVKEHYQYSVVENFVKDSAGISSLST----LGLEISYDFSPIMVEYVEQKQSIFQFLTNLCAIMGGVFTTSSLLV 310          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7S2AXB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB8_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.720e-28
Identity = 94/287 (32.75%), Postives = 142/287 (49.48%), Query Frame = 1
Query:   22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAV-ADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQI-LNHDPSRVILK--NGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAI--AVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLL 864
            G I+T+AS TL+V+L  SE L+F  V T  HM V +   D  +V   LH TFP++ C+   +  +   G             P   V         G  GC+L G + V +  G   +   +   PS  +L+  +G + AT      G+ +  G N++HTIH   FGP   G      N L     V     G  ++ +KV+P  ++ + R+ V ++ YS +  FV   +  A+K  +AP    G+ F YDF PVMV Y + + S+L+F+T +C IIGG+ TVSGL+
Sbjct:   25 GAILTLASSTLIVLLCFSELLVFSSVKTVHHMTVDSAAADRPSVRISLHATFPHLACDSTNLEVEATRGD------------PTMDVVNSIVKTPVGEGGCSLKGELLVGKVGGNFHISTGMAGLPSSPMLQLSSGLMSAT---GLMGSFK--GVNMSHTIHHLSFGPKFPGRS----NPLEEVTNVVSTDVGQYQFHIKVIPTVYKYLRRSPVYSNQYSLSEQFVKLDLMSALKASSAP----GIFFYYDFYPVMVEYDEEKVSILQFLTRICGIIGGIFTVSGLI 286          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7R9U8G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8G4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.470e-26
Identity = 86/316 (27.22%), Postives = 143/316 (45.25%), Query Frame = 1
Query:   22 GGIVTVASVTLMVVLFLSE-TLMFIKVDTSSHMAV-ADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMS---------------------GCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKH 900
            GG  T+ +  ++V L L E    FI +D  SHM+V A     + V   +H+TFP++ C++++V ADH  G  G     A + R     + +PF +  G +                     GC+++G   V + AG +   +    P    ++N  ++A           V   N++H IH   FGP    S G   ++L G   +  EG    +Y++++VP       R  ++T+ YS  V      + V   T+ + H GV F Y+F+P+ V Y   R  ++ F+TS+C +IGG   +   +      + RKKH
Sbjct:   21 GGFFTLCTALVLVALLLLEFQRSFIALDAESHMSVDAPATAREFVDVHVHITFPWMPCDEMDVHADHNKGETGFLTQEAFEKRVPREAELRPFRKALGKAFQYPLQVERADNRRQSRETIYGCSIEGRAMVPKVAGDLHFWVPK--PRVSSMENLGVLAAMFPGLVQVDAVP-HNISHAIHSLSFGP----SFGFMSSALEGEINIITEGLAQYQYNIQLVPTRIRNNGRVSLQTNQYS--VTEDDMVLDVMSATSDRYHPGVYFYYEFSPISVEYHRNRGGVMGFLTSLCGLIGGALAILRFIDTFAHRLLRKKH 327          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: B8BZR7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZR7_THAPS)

HSP 1 Score: 111 bits (278), Expect = 7.800e-25
Identity = 99/330 (30.00%), Postives = 155/330 (46.97%), Query Frame = 1
Query:    7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVAD------FNDHDA-------VTARLHVTFPYIGCEDLEVVADHPLGGLG-----NTAAVAVDLRPASRVDRKPFPQKG-------GMSGCTLDGTVEVERAAGTILVQILNHDPSRV--ILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSG--LVKYSLKVVPISHERMYRAEVKTHTYSANVAFVG-EAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHT----VSGLLVRGIQGVSRK 894
            + SV GG +T+ +     +LFLS+ +++I+VDT   M +A+      FN           +  R+HVTFP++ C+ L+   D      G     ++A      R  + +D K     G          GCTL GT++V R  GT+ + +      R   IL  G  +    +   G       NVTH +HD  FG P       G N L G   V   GSG  L   ++K+VP +++R   +  +T+  S +   V  E +A +  T   L  G+  +YDF P+ VR+ ++R++ L F++S+  I+GGV      VSG LV   Q V++K
Sbjct:   18 ERSVSGGFITLLASITAALLFLSQIILYIQVDTRHSMHLAESVPSALFNKSPQNILSGHQIPLRVHVTFPHLPCKALDYSQDGNSESTGKFEHYHSAPYTFTKRVPTVIDYKKAAVSGFKDVNTARRQGCTLVGTIKVPRVGGTMSISVSPEAWRRATSILSFGVDLGKDQDMFHGKL----PNVTHYVHDITFGDPFP----PGSNPLKGVHHVMDNGSGVALANVAVKLVPTTYKRTIYSAKETYQASVSRHIVQPETLAAQRST---LLPGLMLTYDFTPLAVRHVESRENWLVFLSSLVGIVGGVFVTVGLVSGCLVNSAQAVAKK 336          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A7S1CC96_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC96_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.820e-24
Identity = 85/297 (28.62%), Postives = 133/297 (44.78%), Query Frame = 1
Query:   22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQ--KGGMS-GCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLH-------------LGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLL 864
            G ++T A   L V L ++E  ++   +   H+ V D      +   L++ FP++ C DL V      G          +LR    +++ PFP   KG  + GC + GT  V + AG I ++             G      G  R G    A  N +H I    FG P  G V     +L G      +     +Y ++ VP  +E +  A + +H YSA          V DV AP  +              GV F ++F+PVMVR  +T++++L+F+TS+CAI+GGV TV+G++
Sbjct:   22 GAVLTAAFAALSVALVVNEASLWATTEVEDHLRV-DAGVSMPLDVALNIAFPHVRCRDLRVTVSDARG------LTYAELRV--NLEKTPFPDADKGDQAPGCVVAGTATVRKVAGLINIEA------------GAAAQIPGFRRDGD--TAALNTSHVIRKLSFGDPFPGMV----EALGGFTSPPRDKPARYQYFIQAVPTVYEPLRGARIASHQYSATKF-------VTDVEAPDANDFEAIMMGGGVQPAGVYFKFEFSPVMVRVVETKRTVLQFLTSICAIVGGVFTVAGMV 284          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A6G0WYB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYB9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.940e-24
Identity = 85/299 (28.43%), Postives = 133/299 (44.48%), Query Frame = 1
Query:    7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
            + + VG ++TV SV + ++LFLSE  M+   +  + M V        +   + ++F +  C D+ + A    G  G        L   S +   P   +G   GC   G+V+V + AG+  V   +     +     FL                 N +H +H   FGP +   V    N L        +   L KYSL VVP  +  +Y + ++T+ YS    +  E      ++ P    GV F Y+F+P+ V Y +T+ S L+FITS CAI+GGV  V+ +L   I  VS +K D
Sbjct:   20 EKTAVGAVITVLSVAVALLLFLSELNMYTTTEVVNRMYVDTMPQDTIMHIEVDISFLHEKCSDVSMDASDSKGNKG--------LLSDSNIASVPIGAEG--EGCRFTGSVDVHKIAGS--VSFAHEGSLNMFSFMDFLQF---------------NSSHIVHRLTFGPEIPNMV----NPLENVHKTVEKNVALYKYSLSVVPTQYTPLYGSPIQTYQYSVT-EYTSEPHDGGTLSFP----GVSFMYEFSPIKVEYIETKPSFLQFITSTCAILGGVFAVARILDSIIYSVSSRKLD 282          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A1W0A9T6_9STRA (Endoplasmic reticulum-Golgi intermediate compartment protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9T6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.530e-22
Identity = 86/295 (29.15%), Postives = 137/295 (46.44%), Query Frame = 1
Query:   22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVT-ARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
            G I+T+ S+ ++++LFLSE  ++   + ++ M V D +  D V    + +TF +  C D+ + A    G   N   +        + D   +P +    GC   G V++++ AG I      H+ S  +    FL                 N +H +H   FGP    S+ N  N L     V IE   L KY + +VP  +  +Y + V+T+ YS     V E  +  +        GV FSY+F+P+ V Y +T+ S L+F+TS CAI+GGV  V+ +L   +  VS  K D
Sbjct:   25 GAIITLTSLVVVLLLFLSELGIYTTTEVANRMYV-DVDPQDTVMHVEVDITFLHEPCSDVAMDASDTKG---NREVIV-------QSDVVAYPLEDEKEGCRFKGFVDLKKIAGDINFA---HEGSLNMFT--FL------------EFLDFNSSHIVHSLRFGP----SIPNMVNPLENVHKVVIENFKLYKYRISIVPTQYTPLYGSPVQTYQYS-----VTEHASDPNENGRFSFPGVAFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGFVYSVSAHKVD 282          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: W4G1C2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1C2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.030e-20
Identity = 84/308 (27.27%), Postives = 132/308 (42.86%), Query Frame = 1
Query:   22 GGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVG-----------NGRNSLAGNKFVA---IEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
            G I+TV SV ++++LFLSE  ++   +  + M V        +   + +TF +  C D+ + A    G          DL   S +   P        GC L GTV+V + AG  +V   +     +   + FL                 N +H +H   FGP +   V            NGR   +   F+    +    L KY L +VP  H  +Y   V+T+ YS    +  E      ++ P    GV F Y+F+P+ V Y +++ S L+F+TS  AI+GGV  V+ ++   I  VS +K D
Sbjct:   25 GAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQDAVMRIEVDITFLHEKCADVAMDASDIKGNK--------DLLSDSNIAAVPVVSDES-EGCRLTGTVDVHKVAG--VVSFAHAGSLNMFSFSDFLEF---------------NSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYSVT-EYTSEPSEEGALSFP----GVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKMD 301          
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Match: A0A024UDA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDA9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.500e-20
Identity = 78/299 (26.09%), Postives = 129/299 (43.14%), Query Frame = 1
Query:    7 DSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAVTARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQKGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEARTGTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKYSLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFSYDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKHD 903
            + +  G ++TV SV ++ +LFLSE  ++      + M V        +   + +TF +  C+D+ + A    G          DL   S +   P P  G   GC L G V+V + AG  +V   +     +     FL                 N +H +H   FGP +   V    N L        +   L KY + +VP  +  +Y   ++T+ YS    +  E      ++ P    GV F Y+F+P+ V Y +++ S L+F+TS  AI+GGV  V+ ++   I  +S +K D
Sbjct:   20 EKTTCGALITVISVAIVFLLFLSELGIYTTTQVVNRMHVDTVPQDAVMHIEVDITFLHEKCKDVAMDASDVKGNK--------DLLADSNITAVPVPS-GESEGCRLTGFVDVHKVAG--VVSFAHEGSLNMFSFMDFLEF---------------NASHIVHRLSFGPDIPNMV----NPLQDVHKSVEKNVALYKYGVSIVPTQYTPLYGPPIQTYQYSVT-EYTSEPNEGGVMSFP----GVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSVIYSMSSRKLD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11539.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JND9_9PHAE5.520e-14167.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UYF2_9STRA1.760e-3429.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AXB8_9STRA2.720e-2832.75Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9U8G4_9STRA6.470e-2627.22Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
B8BZR7_THAPS7.800e-2530.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1CC96_9STRA2.820e-2428.62Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6G0WYB9_9STRA3.940e-2428.43Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1W0A9T6_9STRA5.530e-2229.15Endoplasmic reticulum-Golgi intermediate compartme... [more]
W4G1C2_9STRA2.030e-2027.27Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A024UDA9_9STRA5.500e-2026.09Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11539contigM-pyrifera_M_contig11539:4492..7357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.1
Seed ortholog evalue1.8e-111
Seed eggNOG ortholog2880.D7G740
KEGG koko:K20365,ko:K20367
Hectar predicted targeting categorysignal anchor
GOsGO:0008150,GO:0009825,GO:0009987,GO:0016049,GO:0040007
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG0445@1,KOG2667@2759
Ec32 ortholog descriptionEndoplasmic reticulum vesicle transporter, C-terminal
Ec32 orthologEc-01_011140.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons3
Model size908
Cds size906
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11539.3198.1prot_M-pyrifera_M_contig11539.3198.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11539 4492..7357 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815670.0185285-CDS-M-pyrifera_M_contig11539:4491..52041622815670.0185285-CDS-M-pyrifera_M_contig11539:4491..5204Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11539 4492..5204 -
1692277513.871678-CDS-M-pyrifera_M_contig11539:4491..52041692277513.871678-CDS-M-pyrifera_M_contig11539:4491..5204Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11539 4492..5204 -
1622815670.0346403-CDS-M-pyrifera_M_contig11539:6079..62411622815670.0346403-CDS-M-pyrifera_M_contig11539:6079..6241Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11539 6080..6241 -
1692277513.8824306-CDS-M-pyrifera_M_contig11539:6079..62411692277513.8824306-CDS-M-pyrifera_M_contig11539:6079..6241Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11539 6080..6241 -
1622815670.0496988-CDS-M-pyrifera_M_contig11539:7326..73571622815670.0496988-CDS-M-pyrifera_M_contig11539:7326..7357Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11539 7327..7357 -
1692277513.8966758-CDS-M-pyrifera_M_contig11539:7326..73571692277513.8966758-CDS-M-pyrifera_M_contig11539:7326..7357Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11539 7327..7357 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11539.3198.1

>prot_M-pyrifera_M_contig11539.3198.1 ID=prot_M-pyrifera_M_contig11539.3198.1|Name=mRNA_M-pyrifera_M_contig11539.3198.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=302bp
IFDSSVVGGIVTVASVTLMVVLFLSETLMFIKVDTSSHMAVADFNDHDAV
TARLHVTFPYIGCEDLEVVADHPLGGLGNTAAVAVDLRPASRVDRKPFPQ
KGGMSGCTLDGTVEVERAAGTILVQILNHDPSRVILKNGFLVATRGEART
GTKRVAGQNVTHTIHDFGFGPPMSGSVGNGRNSLAGNKFVAIEGSGLVKY
SLKVVPISHERMYRAEVKTHTYSANVAFVGEAIAVKDVTAPKLHLGVEFS
YDFNPVMVRYTDTRKSMLEFITSVCAIIGGVHTVSGLLVRGIQGVSRKKH
D*
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mRNA from alignment at M-pyrifera_M_contig11539:4492..7357-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11539.3198.1 ID=mRNA_M-pyrifera_M_contig11539.3198.1|Name=mRNA_M-pyrifera_M_contig11539.3198.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2866bp|location=Sequence derived from alignment at M-pyrifera_M_contig11539:4492..7357- (Macrocystis pyrifera P11B4 male)
ATCTTCGACAGCTCTGTCGTCGGAGGTATCGGTGAGAGCTTCTGGTCGCG TGTCCTAGATCGTATCAAAGGCCAGCCAGCAGGTCCCCTGTTCCCCTGTT GTTGTATTTAGCCTACACTGCTTTACACCTCTCCGGCATGATAGCGCCAA AACGCATCTTACTCTTCTGTACTCGTGCGAGTACCTTGTACTCGCGGCCT GTGATATTGCTTCCGACGTCGTATTACAGATTATACTCGTGTTGTTGTAA AAATAATACACAGGTACCAGTACACCTACGTCAGGTATATATGTTCGCTA TCCCCGTGCTCGCGGTCGTTTCGTGCGTATCTGGTATATACTCGCACTGC TGTGTTCTTTGTACGCGGCAACGCCATGAAACACCTCACCAAGCATCACG AGGGGGAGAGACTATAACGGGCAAACACTGCAACCATGCTCACCGAAACC GTTCCAGCACCAGATCCCTATCGAGTTGTCGTCCTCGACCACGGTGTGCG CGGAGGAGCTGCCTACTCGTACCGTAGGTTGTCGGGGAGCCCGTCGGCGT AGCCGCACTCCCTACACAGCAGTGGACCATGACGGCGTGCCCCATCGAAG GCAGCCTCACTTGCTAATAGTGTGGAAACCCAATTGGCTTGTTGTTGGTG TGTTTTAGTACCGAAGTCCCGTTCTGGGGACAAATCGCTTGGAATTAGAC TGGTTTGTCCCCTAATCGGGACTGCGGTACTAAAGAGGTTAATGTGGTGA AAATAATTGCAGACAACGAAATCGACATATATCGACTCAGACACCATGAT TTAGTTTTATATACATGTTCAGATTAATGGCACCGTCCCTTACCGCAGAT GGTGTCGATGCCTTCTCTTTCCTCAAATAGTCCCTCTATATACCAGGTAT ATGTGCGCGTATCATGTGTGTAGAGAGTTTACGCCTGGATTTTTGCGGTA GGATGCCTTTTTCGCACGTCCCCTATCATGCGCGTTAGCACTTTGATGTG GACTACTTGAACGTATTTGTATTGGCACGAAGTACAAAGTATGTAAACTC GCTGTTTGCTATTGTTTCCGCGGTCGTTCCGACTTTCCGCCTGCGCCACC CGTCCCGTCCCTGCAGTCACGGTCGCGTCCGTGACCCTTATGGTGGTGCT CTTCTTGTCCGAGACGTTGATGTTCATCAAGGTCGACACGTCCAGCCACA TGGCAGTCGCAGACTTCAATGACCACGACGCTGTTACAGCTCGCCTGCAT GTTACATTCCCGTACATCGGTTGCGAAGGCGAGTGTACACTACTGTAGCA TGTCGAAACGTGTTCGTTTTCGTACGTCCAACGTACCGCCCTGCCATGTC CTCGTGGTGTACATCGTCATTGATCATTGCGCTCGTACATATAGTATAGA AGGCAGCCACGGTCGTAGTCACTCTATTGGTGAAGTTACAGCGGCGATCA TCCTCATCCGTACCGTGCCGTAGGCTCATGAAGAGTTCTTCGATATCGAT GTTTTTTTCTACGCTACTACGCACAAACCGCAGCACCGAGCACCCCAGCG TTGCGTAGATACGCTGTTACATCTTACCTCCTCGTCTTTGTCAGCTTTAC TGGCAGCTCGTAGAGAGAGCGTTGCACACAAGCTATCCTGCCGTATTCCG CCCCATTCCCTTTCGGACAGGTGTTTGTTGCGGCACTCCTTTCGCTATAC GTGGCGTCATTTTGTTGTTCTTCGTAAGGACTACGAGACAGTGACTGCCC CTAACTAGGAATTGATGAGCTTGAGCACGCTTGACTTCAGCAACGTTCCA TTCGAGGCCTGCCGTGTGCGCGACCTCCTCTTTTCCTCATCGTATGTCCA TCTCACTTGTTCGCAATGAGGTGTACACTCGATACTGAGTTCTGATTGTT CTCTTTTTGTATTCATAACCCGGTACGCCAGCGCCTCAATATACATGTGA GACCTTTGTCCGTGGCACTAAGTATAGTCTCGCGGTGCCTTGCAGACCTT TTGCGGCGTGCGCTACGTACAAGTGCTCCGCCCCCAGCCCACCCAGTTGT CGCCAAGCAAGCGCGTGATATTCATTTTTGTGTCGTGGTGTATTCCTCTT CATATCTGACCCTCGCCTATATTGCCGCGACTCAATCTGTTATCATCCAT CAGACCTCGAGGTTGTCGCCGACCACCCCCTAGGAGGCCTGGGAAACACA GCAGCTGTGGCGGTCGATCTGAGACCAGCATCGCGGGTGGACAGAAAACC TTTCCCACAAAAGGGTGGGATGTCGGGGTGCACCCTGGATGGCACAGTGG AGGTGGAGAGAGCAGCGGGAACCATTCTCGTGCAGATCTTGAACCACGAC CCGTCGAGGGTAATTTTGAAAAACGGGTTCCTCGTGGCCACCAGGGGAGA GGCGCGGACTGGGACCAAAAGGGTGGCGGGGCAAAACGTCACGCACACGA TTCACGATTTCGGGTTCGGACCACCGATGTCAGGGTCGGTAGGAAACGGC AGGAATTCCTTGGCGGGGAACAAATTCGTCGCGATAGAGGGGTCGGGTCT GGTAAAGTATTCGTTGAAGGTGGTGCCGATTTCACACGAACGCATGTACC GGGCAGAGGTCAAGACGCACACGTACTCGGCGAACGTCGCGTTCGTGGGC GAAGCGATCGCGGTCAAGGACGTGACGGCACCGAAGTTGCATCTGGGCGT GGAGTTTTCGTATGACTTCAACCCGGTGATGGTTCGGTATACCGACACGC GGAAGTCGATGTTGGAGTTCATCACTAGCGTTTGTGCCATAATCGGGGGT GTACATACCGTCAGCGGGCTTCTTGTACGGGGTATACAGGGGGTGTCCAG GAAAAAACACGACTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11539:4492..7357-

>mRNA_M-pyrifera_M_contig11539.3198.1 ID=mRNA_M-pyrifera_M_contig11539.3198.1|Name=mRNA_M-pyrifera_M_contig11539.3198.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1812bp|location=Sequence derived from alignment at M-pyrifera_M_contig11539:4492..7357- (Macrocystis pyrifera P11B4 male)
ATCTTCGACAGCTCTGTCGTCGGAGGTATCGATCTTCGACAGCTCTGTCG
TCGGAGGTATCGTCACGGTCGCGTCCGTGACCCTTATGGTGGTGCTCTTC
TTGTCCGAGACGTTGATGTTCATCAAGGTCGACACGTCCAGCCACATGGC
AGTCGCAGACTTCAATGACCACGACGCTGTTACAGCTCGCCTGCATGTTA
CATTCCCGTACATCGGTTGCGAAGTCACGGTCGCGTCCGTGACCCTTATG
GTGGTGCTCTTCTTGTCCGAGACGTTGATGTTCATCAAGGTCGACACGTC
CAGCCACATGGCAGTCGCAGACTTCAATGACCACGACGCTGTTACAGCTC
GCCTGCATGTTACATTCCCGTACATCGGTTGCGAAGACCTCGAGGTTGTC
GCCGACCACCCCCTAGGAGGCCTGGGAAACACAGCAGCTGTGGCGGTCGA
TCTGAGACCAGCATCGCGGGTGGACAGAAAACCTTTCCCACAAAAGGGTG
GGATGTCGGGGTGCACCCTGGATGGCACAGTGGAGGTGGAGAGAGCAGCG
GGAACCATTCTCGTGCAGATCTTGAACCACGACCCGTCGAGGGTAATTTT
GAAAAACGGGTTCCTCGTGGCCACCAGGGGAGAGGCGCGGACTGGGACCA
AAAGGGTGGCGGGGCAAAACGTCACGCACACGATTCACGATTTCGGGTTC
GGACCACCGATGTCAGGGTCGGTAGGAAACGGCAGGAATTCCTTGGCGGG
GAACAAATTCGTCGCGATAGAGGGGTCGGGTCTGGTAAAGTATTCGTTGA
AGGTGGTGCCGATTTCACACGAACGCATGTACCGGGCAGAGGTCAAGACG
CACACGTACTCGGCGAACGTCGCGTTCGTGGGCGAAGCGATCGCGGTCAA
GGACGTGACGGCACCGAAGTTGCATCTGGGCGTGGAGTTTTCGTATGACT
TCAACCCGGTGATGGTTCGGTATACCGACACGCGGAAGTCGATGTTGGAG
TTCATCACTAGCGTTTGTGCCATAATCGGGGGTGTACATACCGTCAGCGG
GCTTCTTGTACGGGGTATACAGGGGGTGTCCAGGAAAAAACACGACTAAA
CCTCGAGGTTGTCGCCGACCACCCCCTAGGAGGCCTGGGAAACACAGCAG
CTGTGGCGGTCGATCTGAGACCAGCATCGCGGGTGGACAGAAAACCTTTC
CCACAAAAGGGTGGGATGTCGGGGTGCACCCTGGATGGCACAGTGGAGGT
GGAGAGAGCAGCGGGAACCATTCTCGTGCAGATCTTGAACCACGACCCGT
CGAGGGTAATTTTGAAAAACGGGTTCCTCGTGGCCACCAGGGGAGAGGCG
CGGACTGGGACCAAAAGGGTGGCGGGGCAAAACGTCACGCACACGATTCA
CGATTTCGGGTTCGGACCACCGATGTCAGGGTCGGTAGGAAACGGCAGGA
ATTCCTTGGCGGGGAACAAATTCGTCGCGATAGAGGGGTCGGGTCTGGTA
AAGTATTCGTTGAAGGTGGTGCCGATTTCACACGAACGCATGTACCGGGC
AGAGGTCAAGACGCACACGTACTCGGCGAACGTCGCGTTCGTGGGCGAAG
CGATCGCGGTCAAGGACGTGACGGCACCGAAGTTGCATCTGGGCGTGGAG
TTTTCGTATGACTTCAACCCGGTGATGGTTCGGTATACCGACACGCGGAA
GTCGATGTTGGAGTTCATCACTAGCGTTTGTGCCATAATCGGGGGTGTAC
ATACCGTCAGCGGGCTTCTTGTACGGGGTATACAGGGGGTGTCCAGGAAA
AAACACGACTAA
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