mRNA_M-pyrifera_M_contig101551.319.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A7S4IP85_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IP85_9EUKA) HSP 1 Score: 121 bits (303), Expect = 2.110e-32 Identity = 58/99 (58.59%), Postives = 78/99 (78.79%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFL 297 LVDKA+EQM+ERI QL+ DS++DQLY KA C++ALR GCV+EEE A+N +LR +R+ HEGKR +AFW L+V ++LIHE ECE+S +TK E+E+ Sbjct: 36 LVDKAIEQMKERILQLLNDSVKDQLYPKAFGCVEALRVGCVQEEEPAAFNTFLRLMRSMHEGKRHNAFWMLIVDKKVSLIHEGECEESDITKEESEQVF 134
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A151ZH86_9MYCE (ATP-dependent DNA helicase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZH86_9MYCE) HSP 1 Score: 122 bits (307), Expect = 6.080e-30 Identity = 60/128 (46.88%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPS-QEAEDSVMEEAGTDEVDDLFDMVE 381 LVDKA+ M+ RI QLV+DS++DQ Y+KA++C+K LR GC++E E+DA+N++L+++R +E K++D FWQL+++ +TLI+EEE + S +T E+ +FL S Q+ TD VDDLFD +E Sbjct: 614 LVDKAIALMRSRIQQLVSDSLKDQYYQKAIECIKELRVGCIKESESDAFNSFLKEIRQLYESKKKDDFWQLIMSNSITLINEEESDSSDITVEESIQFLDKKSKQQPISQPTTNQDTDSVDDLFDQIE 741
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A8J4PTU9_9MYCE (Ku domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTU9_9MYCE) HSP 1 Score: 115 bits (288), Expect = 2.260e-27 Identity = 59/128 (46.09%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQ-EAEDSVMEEAGTDEVDDLFDMVE 381 LVDKA+ M+ERI QLV DS++DQ Y+KA+DC+K LR GC++E E D +N ++++L++S + K+RD FWQ++V + LI EE + S +T EA FL S ++ + A TD +DDLFD +E Sbjct: 621 LVDKAITLMKERILQLVNDSLKDQYYQKALDCVKELRLGCIKESEPDQFNTFIKELKSSFQSKKRDDFWQVLVEYNVNLISMEESDSSEITADEANSFLERKSSTQSIAQPVANANTDSIDDLFDQIE 748
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: F1A270_DICPU (VWFA domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A270_DICPU) HSP 1 Score: 115 bits (287), Expect = 3.110e-27 Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAA---GLTLIHEEECEDSPVTKAEAEEFLTAPSQEAED-SVMEEAGTDEVDDLFDMVE 381 LVDKA+ M+ERI QLV DS+++Q Y+KA +C+K LR GC+RE EAD++N++++ +R+ +E K++D FW+ + + LI E+EC+ S ++K EA EFL + + TD VDDLFD +E Sbjct: 639 LVDKAITLMKERIIQLVNDSLKEQYYQKAFECIKELRNGCIRESEADSFNSFIKDIRSLYENKKKDDFWKYITTNQPYAINLISEDECDSSSISKDEANEFLNRKQSNTQTPQINTNTNTDSVDDLFDQIE 769
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: XRCC5_DICDI (X-ray repair cross-complementing protein 5 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=XRCC5_DICDI) HSP 1 Score: 115 bits (287), Expect = 3.130e-27 Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVA--------AGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 381 LVDKA+ M+ERI QLV DS+RDQ Y+KA +C+K LR GC+RE EA+ +N +L+ +R+ + K+RD FWQ + A + LI ++EC+ S VT+ E ++FL ++ + TD VDDLFD +E Sbjct: 662 LVDKAITLMKERILQLVNDSLRDQYYQKAFECIKELRVGCIRESEAEQFNGFLKDMRSLFQSKKRDDFWQYITADVTSILGEKSINLITQDECDSSEVTQEELDQFLDKKVKQFNPPPITNVNTDSVDDLFDQIE 796
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: UPI000644DEE0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DEE0) HSP 1 Score: 112 bits (279), Expect = 3.720e-26 Identity = 60/127 (47.24%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 381 LVDKAV M++RI QLV DS++DQ Y+KA+DC+ LR GC++E E++ +N +L +LR +EGKRRD FWQL+ +TLI E +DS +++++A FL + A V+ +D VDDLFD +E Sbjct: 628 LVDKAVALMKQRIVQLVNDSLKDQFYQKALDCVVELRKGCIKESESEEFNTFLGELRDYYEGKRRDDFWQLLRVQSITLISTAESDDSGISESDALAFLGSKPTAAA-PVLSTPKSDSVDDLFDQIE 753
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: D3BLJ3_POLPP (ATP-dependent DNA helicase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BLJ3_POLPP) HSP 1 Score: 111 bits (277), Expect = 6.770e-26 Identity = 57/127 (44.88%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 381 LVDKA+ M++RI QLV DS++DQ Y+KA++C+ ALR G ++E E+ +N +LR+LR +E K+RD FWQL+V + LI +E +DS +T+ E++EFL + + + + + +D VDDLFD +E Sbjct: 573 LVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVALRRGSIKESESLVFNQFLRELRDYYESKKRDDFWQLIVTNQIGLITNDESDDSEITEKESKEFLGSKRKTIAINNNQPSKSDSVDDLFDQIE 699
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: F4PIU8_CAVFA (ATP-dependent DNA helicase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIU8_CAVFA) HSP 1 Score: 110 bits (275), Expect = 1.290e-25 Identity = 58/128 (45.31%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAED-SVMEEAGTDEVDDLFDMVE 381 LVDKA+ M+ RI QLV DS++DQ Y+KA++C+ ALR GC++E E+DA+N +L++LR E K+RD FWQL+V +TLI+++E + S V++ E+++FL + + D VDDLFD +E Sbjct: 629 LVDKAINLMRSRIVQLVNDSLKDQFYQKALECVVALRQGCIKESESDAFNTFLQELRDYFESKKRDDFWQLLVTWKITLINDQESDTSSVSEEESKKFLGVKPKPVQPLQAPSNNKGDTVDDLFDQIE 756
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: D2VUC7_NAEGR (Ku70/Ku80 beta-barrel domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VUC7_NAEGR) HSP 1 Score: 99.0 bits (245), Expect = 1.430e-21 Identity = 57/131 (43.51%), Postives = 87/131 (66.41%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFW-QLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEV---DDLFDMVE 381 +VDKA+++MQ I +LV DSI DQ YEK + C+K LR GC+RE E + +N +L+KL+ S+ +R+ FW +V ++LI ++EC++S VT+ EA++FLT A V++E DE +DLFD +E Sbjct: 646 MVDKAIQEMQVVIFKLVNDSIEDQYYEKVLACIKTLREGCIREAEPNQFNNFLKKLKQSYSKGKREDFWCSFIVQNNISLITQDECDESEVTEDEAKKFLTEAVIAA---VIQEESEDEKIGDNDLFDQLE 773
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A6A5C455_NAEFO (VWFA domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C455_NAEFO) HSP 1 Score: 94.0 bits (232), Expect = 8.100e-20 Identity = 55/134 (41.04%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 1 LVDKAVEQMQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQ-LVVAAGLTLIHEEECEDSPVTKAEAEEFLT-----APSQE-AEDSVMEEAGTDEVDDLFDMVE 381 LVDKA+++MQ I +L+ DSI DQ YEK + C++ LR GC+RE E + +N +++ L+ + +R+ FW+ +V ++LI ++EC++S VT+ EA+ FLT AP QE ED M + +DLFD +E Sbjct: 651 LVDKAIKEMQNVIFKLINDSIEDQYYEKVLSCVRVLREGCIRESEPELFNHFMKILKQQYSKGKREEFWKNYIVGNKISLITQDECDESEVTEEEAKNFLTQAVLAAPVQEEVEDEKMGD------NDLFDELE 778 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101551.319.1 >prot_M-pyrifera_M_contig101551.319.1 ID=prot_M-pyrifera_M_contig101551.319.1|Name=mRNA_M-pyrifera_M_contig101551.319.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRAback to top mRNA from alignment at M-pyrifera_M_contig101551:1..384+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101551.319.1 ID=mRNA_M-pyrifera_M_contig101551.319.1|Name=mRNA_M-pyrifera_M_contig101551.319.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig101551:1..384+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101551:1..384+ >mRNA_M-pyrifera_M_contig101551.319.1 ID=mRNA_M-pyrifera_M_contig101551.319.1|Name=mRNA_M-pyrifera_M_contig101551.319.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig101551:1..384+ (Macrocystis pyrifera P11B4 male)back to top |