mRNA_M-pyrifera_M_contig115305.3185.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A5N5TN12_9CRUS (Centrin-2 n=2 Tax=Armadillidium TaxID=13346 RepID=A0A5N5TN12_9CRUS) HSP 1 Score: 80.1 bits (196), Expect = 1.390e-16 Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 4 GRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLF---SGGKDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKG 330
G ID+KE++ A+ ALG+ P+KE+++++L + +G + Y+DF + + ++ +E + AF+LF S GK I+ +LKRVA+T GE+L EEL EMI AD G
Sbjct: 46 GSIDSKELKVAMRALGFEPKKEEIKKILGEVDSQGSGRIKYEDFTRIMADKMADKDVKEEILKAFKLFDNDSTGK--ISFKNLKRVAETLGENLTDEELQEMIDEADRDGDG 155
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: K8YSR4_NANGC (Caltractin (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR4_NANGC) HSP 1 Score: 79.7 bits (195), Expect = 1.460e-16 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 4 GRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFSG-GKDRITATDLKRVADTCGEDLDSEELHEMIG 306
G ID +E++ A ALG+ +K +++ L K+ AT++YD+FLD+A P + + ERE ++ F LF G I+ +LKRVA GE+L EEL EMIG
Sbjct: 54 GTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIG 155
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A7S2DRM7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DRM7_9EUKA) HSP 1 Score: 77.8 bits (190), Expect = 1.560e-15 Identity = 40/110 (36.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 4 GRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLF-SGGKDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKG 330
G IDA+E+ + ALG P KE +++L+ + K L +D +L++ + E+ +E ++ AFRLF S GK + A+DL+R+AD GE ++ +E+ +MI AD + G
Sbjct: 58 GTIDAEELLVVMRALGHEPRKEDLKRLVTDSDKHNTGQLDFDGYLNIILNKMAERPSQEDLQKAFRLFDSQGKKTVDASDLRRIADQIGEQIEDDEIADMIYNADTSGTG 167
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A5S6QRW7_TRIMR (Uncharacterized protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QRW7_TRIMR) HSP 1 Score: 70.9 bits (172), Expect = 4.430e-13 Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 1 AGRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFSGGK-DRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKGF 333
+G++D K ++FA+ ALG+ P+ E+V+ +L++ +G +S +FLD+ E R + A+ +F GG +IT DLKRVA GE + EEL EMI D G
Sbjct: 39 SGKMDVKNLKFAMRALGFEPKAEEVKVVLSEFNIEGE--ISSAEFLDIVAAKFAENGSRNEIMKAYTMFIGGSCGKITFDDLKRVAKELGESISDEELREMIEEGDYNKDGM 148
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: L7MG57_RHIPC (Putative centrin-1 (Fragment) n=2 Tax=Ixodidae TaxID=6939 RepID=L7MG57_RHIPC) HSP 1 Score: 70.5 bits (171), Expect = 1.030e-12 Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 AGRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFS-GGKDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKG 330
+G ++AK+++FA+ ALG+ P KE+V++LL + K+ ++ +DF++V L E+ E + AF+LF +I+ +LK VA E+L EEL EMI AD G
Sbjct: 63 SGFMEAKDLKFAMRALGFEPRKEEVKKLLAEIDKQETGKIAREDFMNVMATRLAEKDINEEIMKAFQLFDEDNTGKISFKNLKSVAKQLSENLSDEELQEMINEADRDGDG 173
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A224YV35_9ACAR (Centrin-1 n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224YV35_9ACAR) HSP 1 Score: 70.5 bits (171), Expect = 1.030e-12 Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 AGRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFS-GGKDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKG 330
+G ++AK+++FA+ ALG+ P KE+V++LL + K+ ++ +DF++V L E+ E + AF+LF +I+ +LK VA E+L EEL EMI AD G
Sbjct: 63 SGFMEAKDLKFAMRALGFEPRKEEVKKLLAEIDKQETGKIAREDFMNVMATRLAEKDINEEIMKAFQLFDEDNTGKISFKNLKSVAKQLSENLSDEELQEMINEADRDGDG 173
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: L7LV92_RHIPC (Putative centrin-1 n=11 Tax=Ixodidae TaxID=6939 RepID=L7LV92_RHIPC) HSP 1 Score: 70.5 bits (171), Expect = 1.320e-12 Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 AGRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFS-GGKDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKG 330
+G ++AK+++FA+ ALG+ P KE+V++LL + K+ ++ +DF++V L E+ E + AF+LF +I+ +LK VA E+L EEL EMI AD G
Sbjct: 41 SGFMEAKDLKFAMRALGFEPRKEEVKKLLAEIDKQETGKIAREDFMNVMATRLAEKDINEEIMKAFQLFDEDNTGKISFKNLKSVAKQLSENLSDEELQEMINEADRDGDG 151
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A7M7KGR3_VARDE (Uncharacterized protein n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7KGR3_VARDE) HSP 1 Score: 62.0 bits (149), Expect = 1.170e-9 Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 10 IDAKEVQFALSALGWYPEKEKVQQLLNKAKKKG--HATLSYDDFLDVARPLLVEQKERERMEHAFRLFSG-GKDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKGF 333
+ AKE++FA+ ALG P KE+V++LL + K+ A L+ +F +V R L E E ++ AF+LF I+ DL+RVA+ G ++ EEL +MI AD G
Sbjct: 41 LPAKELKFAMRALGLEPRKEEVKKLLTELGKQDSPQARLTLTEFEEVIRTRLREDPNDETLK-AFKLFDERNTGMISLEDLQRVANELGAEISEEELRQMIEEADNDGDGL 150
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A482SIZ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIZ7_9ARCH) HSP 1 Score: 60.8 bits (146), Expect = 3.910e-9 Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 4 GRIDAKEVQFALSALGWYPEKEKVQQL-LNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFSGGKD-RITATDLKRVADTCGEDLDSEEL 291
G ID +E++ A ALG+ +K +++QL ++ K AT+++D+F+++ P ++ + RE + F LF IT +LKRVA GE+L EEL
Sbjct: 53 GNIDVRELKAAFRALGFQVKKAEIRQLFIDMDKDLSSATVTFDEFVEMVTPRMLNRDSREEILKVFALFDDDNSGSITFKNLKRVAAELGENLTDEEL 150
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Match: A0A0L0HPV9_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPV9_SPIPD) HSP 1 Score: 61.6 bits (148), Expect = 4.620e-9 Identity = 37/136 (27.21%), Postives = 64/136 (47.06%), Query Frame = 1
Query: 1 AGRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARPLLVEQKERERMEHAFRLFSGG--------------------------KDRITATDLKRVADTCGEDLDSEELHEMIGCADPTAKG 330
+G I KE + A+ ALG+ P ++V+++L + G T+ +++FL + + ++ RE M F LF+ RI+A+D++RVA+ GE L +E+ EM+ AD G
Sbjct: 90 SGEISGKEWRVAMRALGFEPSNDEVKRMLKEMDDNGSGTIDFEEFLGLMERRMADKYAREEMRKVFELFTKPDLSIQRSRSTARTSPLRTGTGVAKHPNQRISASDIRRVANLVGERLTEDEIKEMLEEADRDGDG 225 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115305.3185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115305.3185.1 >prot_M-pyrifera_M_contig115305.3185.1 ID=prot_M-pyrifera_M_contig115305.3185.1|Name=mRNA_M-pyrifera_M_contig115305.3185.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp AGRIDAKEVQFALSALGWYPEKEKVQQLLNKAKKKGHATLSYDDFLDVARback to top mRNA from alignment at M-pyrifera_M_contig115305:161..493- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115305.3185.1 ID=mRNA_M-pyrifera_M_contig115305.3185.1|Name=mRNA_M-pyrifera_M_contig115305.3185.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=333bp|location=Sequence derived from alignment at M-pyrifera_M_contig115305:161..493- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115305:161..493- >mRNA_M-pyrifera_M_contig115305.3185.1 ID=mRNA_M-pyrifera_M_contig115305.3185.1|Name=mRNA_M-pyrifera_M_contig115305.3185.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig115305:161..493- (Macrocystis pyrifera P11B4 male)back to top |