mRNA_M-pyrifera_M_contig115280.3178.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A0N4UTP8_ENTVE (DNA topoisomerase 2 n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UTP8_ENTVE) HSP 1 Score: 126 bits (317), Expect = 3.330e-32 Identity = 69/176 (39.20%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 1 VLALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLY--LPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREELVA 522
+L LM + VD+AG L GV+VS NG + FE+Y KLY + +S S+ C +N RW++A+ S G F H SFVN ++T++GG HV +ADQ+ A+ ++ S + + +S+LFLF+N L+ NPSFDSQ KE+LTTP+ G V+P + +++A
Sbjct: 131 ILQLMKKRTVDVAGTLDGVEVSFNGQSFEIHGFEDYVKLYSDVQMNSLTTSKSVFCYVNPRWKIAVGSSDFG-FEHVSFVNNIATTKGGRHVDYIADQVVSAIKAELIEQNRSYKTIRPSMIKSRLFLFVNCLIENPSFDSQTKEYLTTPLQKFGSKCVLPHVFASQIVNETDVIA 305
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A6G0XU20_9STRA (DNA topoisomerase 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XU20_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.840e-30 Identity = 70/171 (40.94%), Postives = 104/171 (60.82%), Query Frame = 1
Query: 7 ALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREELV 519
A++++ VVD+AGCLPGV V LNGA + +S FE Y + + +S +L +NKRW++ + PS G F SFVNGM+T+RGGTHV AV +QI + +ADA R + +Q + + LF+ L+ NP+FDSQ+KE LT+ + G V+ K L++ +V
Sbjct: 262 AVLSKRVVDVAGCLPGVDVKLNGAPVHLSGFESYIQAFEGATTTDASPALYAKVNKRWEVGVLPSDVG-FTQVSFVNGMTTTRGGTHVQAVLEQIVRRVADAVQTRHRDLNSLQVSQIKPHIALFVKCLIENPTFDSQMKECLTSKPEMYGSSCVLTDKFLRQVVTSSGIV 431
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A2L0BTG9_9COLE (DNA topoisomerase 2 (Fragment) n=1 Tax=Trixagus sp. INB125 TaxID=2055563 RepID=A0A2L0BTG9_9COLE) HSP 1 Score: 123 bits (308), Expect = 5.500e-30 Identity = 67/166 (40.36%), Postives = 102/166 (61.45%), Query Frame = 1
Query: 1 VLALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLAC---NMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVL 489
++ LM+R D+A GV+V LNG IPV+SF++Y LY+ + L N+N RW++A+ SPD DF SFVN ++T++GG HV VAD I K L++ NK+ SG ++T Q ++ ++LF+N L+ NPSFDSQ KE++T + G + +K +
Sbjct: 138 IVGLMSRRAFDVAASTRGVKVFLNGKKIPVNSFKDYIDLYIKDKEDDFGRPLKVVYENVNDRWEVAMTISPDSDFQQVSFVNSIATTKGGKHVDYVADNIVKQLSNVLNKKNKSGVKLTPKQMKNHMWLFINCLIVNPSFDSQTKENMTLQSKSFGSKCELSQKFI 303
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A812XJI5_9DINO (DNA topoisomerase 2 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XJI5_9DINO) HSP 1 Score: 124 bits (312), Expect = 8.450e-30 Identity = 75/159 (47.17%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 19 RLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKR-------GAASSLSLACNM-----NKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALG 459
R V D+AG P V VSLNG + V++FEEY K +L ++ G A + A NM NKRW++A A +P F H SFVNG+ TS GGTHV V D IAK + +A KR PS +T R L LFLN L+ NPSF SQ KE L TP G
Sbjct: 153 RRVYDVAGTTPDVAVSLNGKPVEVANFEEYAKRFLTQQEEENEEQGDAEAPETAANMYYEKVNKRWEVAAAVAPHQGFQHVSFVNGIFTSEGGTHVAHVGDAIAKKVMEALKKRNPS-LNITAASVRQHLMLFLNCLIENPSFSSQAKEQLVTPPSQFG 310
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A4P9Y1R4_9FUNG (DNA topoisomerase 2 (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y1R4_9FUNG) HSP 1 Score: 122 bits (306), Expect = 1.100e-29 Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 7 ALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVL 489
AL+ + VVD+AGC+ V+V LNG I V +F+EYC LYL + + +N RW++ PS DG F SFVN ++TSRGGTHV +A+QI L +K++ + QARS+L++F+N L+ NP+FDSQ K+ LT G ++P L
Sbjct: 208 ALLRKRVVDVAGCVRDVKVFLNGERIKVKNFKEYCGLYLEEIQKPKPSMIYERINDRWEVCFTPSTDGQFHQVSFVNSIATSRGGTHVTYIAEQIVSYLVKLGSKKVKQ-TTIKPHQARSQLWVFVNCLIVNPAFDSQTKDTLTLRASFFGSKCILPDPYL 367
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A1J4KFE1_9EUKA (DNA topoisomerase 2 n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KFE1_9EUKA) HSP 1 Score: 123 bits (308), Expect = 3.020e-29 Identity = 72/172 (41.86%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 1 VLALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREEL 516
+++L + V DMAG L GV V LNG +PV +FE+YCK YL + ++ L+C +N RW++ IA S DG F SFVN ++T+RGGTHV VA+QI K + + V A+ +F+F+N L+ NPSFDSQ KE L V G VP+ LK+ + E+
Sbjct: 237 IVSLFKKRVWDMAGVLKGVTVLLNGEKVPVKNFEDYCKKYLDE----NATFLSCEVNDRWKIGIAAS-DGQFGQVSFVNSVATTRGGTHVDYVANQITKYICKELENSRGNKITVRPNIAKYHIFVFVNCLIDNPSFDSQTKETLMLKVSEFGSKCDVPEAFLKKIMKQTEI 403
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: UPI0010BD1E12 (DNA topoisomerase 2-alpha n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD1E12) HSP 1 Score: 123 bits (308), Expect = 3.040e-29 Identity = 63/164 (38.41%), Postives = 100/164 (60.98%), Query Frame = 1
Query: 4 LALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASS----LSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKK 483
+AL++R D+AGC PGV+V LNG +P+ SF++Y +++ K S + + +N+RW++A SP+GDF SFVN ++T++GGTHV V D + K L + K+ +G + Q R +++F+N L+ NP+FDSQ KE++T G VV +K
Sbjct: 211 IALISRRAYDVAGCTPGVKVFLNGTRLPIKSFKDYVQMFTSKCVNEDSDKPLVVVHEQVNERWEVACCLSPEGDFKQMSFVNNIATTKGGTHVEYVVDSLCKKLTEQVKKKNKAGVNIGKKQIRDHMWIFINCLIENPTFDSQTKENMTKQAKQFGSKCVVSEK 374
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A1V9X187_9ACAR (DNA topoisomerase 2 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9X187_9ACAR) HSP 1 Score: 123 bits (308), Expect = 3.040e-29 Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 1
Query: 7 ALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASS----LSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKK 483
AL++R D+AGC PGV+V LNG +P+ SF++Y +++ K S + + N+N RW++A SP+GDF SFVN ++T++GGTHV V D + K LA+ K+ +G + Q R +++F+N L+ NPSFDSQ KE++T G + +K
Sbjct: 212 ALISRRAYDVAGCTPGVKVFLNGTRLPIKSFKDYVQMFTSKCVHEDSDKPLVVVHENVNPRWEVACCLSPEGDFKQMSFVNNIATTKGGTHVEYVVDTLCKKLAEQVKKKNKAGVNIGKKQIRDHMWIFINCLIENPSFDSQTKENMTKQAKQFGSKCELSEK 374
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A418AXE5_9STRA (DNA topoisomerase 2 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AXE5_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.000e-29 Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 4 LALMTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLY--------LPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAA 501
L ++ + VVD+AGCL V VSLNG +PVS FEEY + Y P A +L +N+RW++A+ PS G ++H SFVNGM+T+RGGTHV V DQ+ + +AD R + ++Q + + +F+ LV NP+FDSQ+KE LT+ + G + V+ ++ LK+ A
Sbjct: 172 LQVLHKRVVDVAGCLSNVSVSLNGTTVPVSGFEEYVQAYGSTSCADDAPDGSAPDTLF--AKVNRRWEVAVMPSDSG-YSHVSFVNGMTTTRGGTHVQIVLDQLCRRIADTIAARHRDLPPLQSSQIKPHVRVFVKALVENPTFDSQMKECLTSKPEFFGSNCVLTERFLKQVA 342
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A7S4V6P4_9STRA (DNA topoisomerase 2 (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6P4_9STRA) HSP 1 Score: 120 bits (302), Expect = 7.670e-29 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 7 ALMTRLVVDMAGCLPG-VQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPS-GARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGRE 510
ALM R VVD+AGC G V+V+LNG IP+ FEEY +LY +R A +S +N RW++ + S G F SFVNGM+T+RGGTHV + Q+ K +A+ K P G VT R L +F N L+ NP+FDSQ+KE LT+ G + + ++ L E E
Sbjct: 36 ALMCRRVVDVAGCAGGKVEVTLNGQIIPIGGFEEYSQLY--RRENAPPVSFQ-RINSRWEVGVGLSDSGSFESVSFVNGMATTRGGTHVNVIVQQVTKRIAERVAKLHPELGETVTQGLVRRNLIVFCNALIENPTFDSQMKESLTSNPTTFGSKYDLSERFLNELLQEE 202 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115280.3178.1 >prot_M-pyrifera_M_contig115280.3178.1 ID=prot_M-pyrifera_M_contig115280.3178.1|Name=mRNA_M-pyrifera_M_contig115280.3178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACback to top mRNA from alignment at M-pyrifera_M_contig115280:21..554- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115280.3178.1 ID=mRNA_M-pyrifera_M_contig115280.3178.1|Name=mRNA_M-pyrifera_M_contig115280.3178.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig115280:21..554- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115280:21..554- >mRNA_M-pyrifera_M_contig115280.3178.1 ID=mRNA_M-pyrifera_M_contig115280.3178.1|Name=mRNA_M-pyrifera_M_contig115280.3178.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig115280:21..554- (Macrocystis pyrifera P11B4 male)back to top |