prot_M-pyrifera_M_contig115280.3178.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115280.3178.1
Unique Nameprot_M-pyrifera_M_contig115280.3178.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A0N4UTP8_ENTVE (DNA topoisomerase 2 n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UTP8_ENTVE)

HSP 1 Score: 124 bits (311), Expect = 2.230e-31
Identity = 67/172 (38.95%), Postives = 101/172 (58.72%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLY--LPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREELVA 170
            M +  VD+AG L GV+VS NG    +  FE+Y KLY  +      +S S+ C +N RW++A+  S  G F H SFVN ++T++GG HV  +ADQ+  A+     ++  S   +  +  +S+LFLF+N L+ NPSFDSQ KE+LTTP+   G   V+P     +     +++A
Sbjct:  135 MKKRTVDVAGTLDGVEVSFNGQSFEIHGFEDYVKLYSDVQMNSLTTSKSVFCYVNPRWKIAVGSSDFG-FEHVSFVNNIATTKGGRHVDYIADQVVSAIKAELIEQNRSYKTIRPSMIKSRLFLFVNCLIENPSFDSQTKEYLTTPLQKFGSKCVLPHVFASQIVNETDVIA 305
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A6G0XU20_9STRA (DNA topoisomerase 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XU20_9STRA)

HSP 1 Score: 125 bits (314), Expect = 4.030e-30
Identity = 69/169 (40.83%), Postives = 102/169 (60.36%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREELV 169
            +++ VVD+AGCLPGV V LNGA + +S FE Y + +       +S +L   +NKRW++ + PS  G F   SFVNGM+T+RGGTHV AV +QI + +ADA   R      +  +Q +  + LF+  L+ NP+FDSQ+KE LT+  +  G   V+  K L++      +V
Sbjct:  264 LSKRVVDVAGCLPGVDVKLNGAPVHLSGFESYIQAFEGATTTDASPALYAKVNKRWEVGVLPSDVG-FTQVSFVNGMTTTRGGTHVQAVLEQIVRRVADAVQTRHRDLNSLQVSQIKPHIALFVKCLIENPTFDSQMKECLTSKPEMYGSSCVLTDKFLRQVVTSSGIV 431
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A812XJI5_9DINO (DNA topoisomerase 2 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XJI5_9DINO)

HSP 1 Score: 125 bits (313), Expect = 5.400e-30
Identity = 75/161 (46.58%), Postives = 92/161 (57.14%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKR-------GAASSLSLACNM-----NKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALG 149
            + R V D+AG  P V VSLNG  + V++FEEY K +L ++       G A +   A NM     NKRW++A A +P   F H SFVNG+ TS GGTHV  V D IAK + +A  KR PS   +T    R  L LFLN L+ NPSF SQ KE L TP    G
Sbjct:  151 LLRRVYDVAGTTPDVAVSLNGKPVEVANFEEYAKRFLTQQEEENEEQGDAEAPETAANMYYEKVNKRWEVAAAVAPHQGFQHVSFVNGIFTSEGGTHVAHVGDAIAKKVMEALKKRNPS-LNITAASVRQHLMLFLNCLIENPSFSSQAKEQLVTPPSQFG 310
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A2L0BTG9_9COLE (DNA topoisomerase 2 (Fragment) n=1 Tax=Trixagus sp. INB125 TaxID=2055563 RepID=A0A2L0BTG9_9COLE)

HSP 1 Score: 121 bits (304), Expect = 1.790e-29
Identity = 66/162 (40.74%), Postives = 99/162 (61.11%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLAC---NMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVL 159
            M+R   D+A    GV+V LNG  IPV+SF++Y  LY+  +       L     N+N RW++A+  SPD DF   SFVN ++T++GG HV  VAD I K L++  NK+  SG ++T  Q ++ ++LF+N L+ NPSFDSQ KE++T    + G    + +K +
Sbjct:  142 MSRRAFDVAASTRGVKVFLNGKKIPVNSFKDYIDLYIKDKEDDFGRPLKVVYENVNDRWEVAMTISPDSDFQQVSFVNSIATTKGGKHVDYVADNIVKQLSNVLNKKNKSGVKLTPKQMKNHMWLFINCLIVNPSFDSQTKENMTLQSKSFGSKCELSQKFI 303
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A418AXE5_9STRA (DNA topoisomerase 2 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AXE5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.740e-29
Identity = 70/169 (41.42%), Postives = 103/169 (60.95%), Query Frame = 0 
Query:    3 RLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLY--------LPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAA 163
            + VVD+AGCL  V VSLNG  +PVS FEEY + Y         P   A  +L     +N+RW++A+ PS  G ++H SFVNGM+T+RGGTHV  V DQ+ + +AD    R      + ++Q +  + +F+  LV NP+FDSQ+KE LT+  +  G + V+ ++ LK+ A
Sbjct:  177 KRVVDVAGCLSNVSVSLNGTTVPVSGFEEYVQAYGSTSCADDAPDGSAPDTLF--AKVNRRWEVAVMPSDSG-YSHVSFVNGMTTTRGGTHVQIVLDQLCRRIADTIAARHRDLPPLQSSQIKPHVRVFVKALVENPTFDSQMKECLTSKPEFFGSNCVLTERFLKQVA 342
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A4P9Y1R4_9FUNG (DNA topoisomerase 2 (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y1R4_9FUNG)

HSP 1 Score: 120 bits (300), Expect = 6.930e-29
Identity = 65/159 (40.88%), Postives = 94/159 (59.12%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVL 159
            + + VVD+AGC+  V+V LNG  I V +F+EYC LYL +        +   +N RW++   PS DG F   SFVN ++TSRGGTHV  +A+QI   L    +K++     +   QARS+L++F+N L+ NP+FDSQ K+ LT      G   ++P   L
Sbjct:  210 LRKRVVDVAGCVRDVKVFLNGERIKVKNFKEYCGLYLEEIQKPKPSMIYERINDRWEVCFTPSTDGQFHQVSFVNSIATSRGGTHVTYIAEQIVSYLVKLGSKKVKQ-TTIKPHQARSQLWVFVNCLIVNPAFDSQTKDTLTLRASFFGSKCILPDPYL 367
[Close]
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A1J4KFE1_9EUKA (DNA topoisomerase 2 n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KFE1_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 9.040e-29
Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 0 
Query:    3 RLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREEL 168
            + V DMAG L GV V LNG  +PV +FE+YCK YL +    ++  L+C +N RW++ IA S DG F   SFVN ++T+RGGTHV  VA+QI K +         +   V    A+  +F+F+N L+ NPSFDSQ KE L   V   G    VP+  LK+   + E+
Sbjct:  243 KRVWDMAGVLKGVTVLLNGEKVPVKNFEDYCKKYLDE----NATFLSCEVNDRWKIGIAAS-DGQFGQVSFVNSVATTRGGTHVDYVANQITKYICKELENSRGNKITVRPNIAKYHIFVFVNCLIDNPSFDSQTKETLMLKVSEFGSKCDVPEAFLKKIMKQTEI 403
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BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A1V9ZPS0_9STRA (DNA topoisomerase 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPS0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.230e-28
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKKVLKEAAGREELVAPLV 173
            + + V D+AGCLP V V  NG  IP+  FE Y   +          SL    NKRW++ IAPS  G F   SFVNGM+TSRGG+HV  + +QI K +AD  N +      VT TQ +  + LF+N L+ NP+FDSQ+KE+LT+  +  G   ++ ++ LK       +V  +V
Sbjct:  271 LRKRVFDVAGCLPNVDVRWNGESIPIVGFESYVHAFEGSTTKEKIPSLYTKANKRWEVGIAPSDVG-FVQVSFVNGMTTSRGGSHVNYILEQIVKRIADHINAK-HKDMTVTATQVKPHVALFVNALIENPTFDSQMKEYLTSRPNTYGSTCLLSERYLKSVIANSGIVERVV 441
[Close]
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: A0A1V9X187_9ACAR (DNA topoisomerase 2 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9X187_9ACAR)

HSP 1 Score: 120 bits (302), Expect = 1.690e-28
Identity = 62/161 (38.51%), Postives = 97/161 (60.25%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASS----LSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKK 157
            ++R   D+AGC PGV+V LNG  +P+ SF++Y +++  K     S    + +  N+N RW++A   SP+GDF   SFVN ++T++GGTHV  V D + K LA+   K+  +G  +   Q R  +++F+N L+ NPSFDSQ KE++T      G    + +K
Sbjct:  214 ISRRAYDVAGCTPGVKVFLNGTRLPIKSFKDYVQMFTSKCVHEDSDKPLVVVHENVNPRWEVACCLSPEGDFKQMSFVNNIATTKGGTHVEYVVDTLCKKLAEQVKKKNKAGVNIGKKQIRDHMWIFINCLIENPSFDSQTKENMTKQAKQFGSKCELSEK 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Match: UPI0010BD1E12 (DNA topoisomerase 2-alpha n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD1E12)

HSP 1 Score: 120 bits (301), Expect = 2.300e-28
Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 0 
Query:    1 MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASS----LSLACNMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADAANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGRDWVVPKK 157
            ++R   D+AGC PGV+V LNG  +P+ SF++Y +++  K     S    + +   +N+RW++A   SP+GDF   SFVN ++T++GGTHV  V D + K L +   K+  +G  +   Q R  +++F+N L+ NP+FDSQ KE++T      G   VV +K
Sbjct:  214 ISRRAYDVAGCTPGVKVFLNGTRLPIKSFKDYVQMFTSKCVNEDSDKPLVVVHEQVNERWEVACCLSPEGDFKQMSFVNNIATTKGGTHVEYVVDSLCKKLTEQVKKKNKAGVNIGKKQIRDHMWIFINCLIENPTFDSQTKENMTKQAKQFGSKCVVSEK 374
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115280.3178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0N4UTP8_ENTVE2.230e-3138.95DNA topoisomerase 2 n=1 Tax=Enterobius vermiculari... [more]
A0A6G0XU20_9STRA4.030e-3040.83DNA topoisomerase 2 n=1 Tax=Aphanomyces euteiches ... [more]
A0A812XJI5_9DINO5.400e-3046.58DNA topoisomerase 2 n=1 Tax=Symbiodinium sp. KB8 T... [more]
A0A2L0BTG9_9COLE1.790e-2940.74DNA topoisomerase 2 (Fragment) n=1 Tax=Trixagus sp... [more]
A0A418AXE5_9STRA4.740e-2941.42DNA topoisomerase 2 n=2 Tax=Aphanomyces invadans T... [more]
A0A4P9Y1R4_9FUNG6.930e-2940.88DNA topoisomerase 2 (Fragment) n=1 Tax=Piptocephal... [more]
A0A1J4KFE1_9EUKA9.040e-2942.77DNA topoisomerase 2 n=1 Tax=Tritrichomonas foetus ... [more]
A0A1V9ZPS0_9STRA1.230e-2840.46DNA topoisomerase 2 n=1 Tax=Thraustotheca clavata ... [more]
A0A1V9X187_9ACAR1.690e-2838.51DNA topoisomerase 2 n=1 Tax=Tropilaelaps mercedesa... [more]
UPI0010BD1E122.300e-2837.89DNA topoisomerase 2-alpha n=1 Tax=Galendromus occi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013506DNA topoisomerase, type IIA, subunit B, domain 2PFAMPF00204DNA_gyraseBcoord: 53..144
e-value: 4.8E-17
score: 62.0
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 1..39
e-value: 2.1E-5
score: 26.1
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 48..170
e-value: 1.6E-29
score: 103.7
NoneNo IPR availablePANTHERPTHR10169DNA TOPOISOMERASE/GYRASEcoord: 1..169
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 18..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115280contigM-pyrifera_M_contig115280:21..542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115280.3178.1mRNA_M-pyrifera_M_contig115280.3178.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115280 21..554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115280.3178.1 ID=prot_M-pyrifera_M_contig115280.3178.1|Name=mRNA_M-pyrifera_M_contig115280.3178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
MTRLVVDMAGCLPGVQVSLNGADIPVSSFEEYCKLYLPKRGAASSLSLAC
NMNKRWQLAIAPSPDGDFAHASFVNGMSTSRGGTHVVAVADQIAKALADA
ANKRLPSGARVTTTQARSKLFLFLNTLVPNPSFDSQVKEHLTTPVDALGR
DWVVPKKVLKEAAGREELVAPLVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013506Topo_IIA_bsu_dom2
IPR036890HATPase_C_sf
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR020568Ribosomal_S5_D2-typ_fold