mRNA_M-pyrifera_M_contig10152.317.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10152.317.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI) HSP 1 Score: 385 bits (990), Expect = 7.960e-120 Identity = 212/323 (65.63%), Postives = 244/323 (75.54%), Query Frame = 1 Query: 4 CCTLEPPVAIIQVQCVQVLHAFLRRKNSERPRGSPPASEGLDLTSGALLFEVRDYHRNQRLSHLYLLHELLRVDQGADNDLHPKAGQVLDRS-PGLMRELLDLARELFKENPPVYGHHGVGGEGAGASVIAARKREWVAQRVSELSEVVGCMVMAGYHRYRLQGDQADLVMDMLFFMQEADFSVPVAFRAYIPAGSEVATKARIFSFTLALLGIEALDLQSVDCPEELVAHHALFRDYNVDDPSARQAARDRLGAVNEVLASMVDATK--SERSAARWRSMEAGSIQGVPNHELVEMPQTLVLLSWGVLLRNACVVIPGLSDG 963 C +L + + +VQCVQVLHAFLRR+NSE PRGSPPASEGLD +S LLFEVRDY RNQRL+HLYLLHELLR+DQG DN LHPKA QVL R P LMR+L +L RELFKENPPV G+G G AARKREWVAQRV+ELSEVVGCMV+AGY+RYR+QGDQA LVMDML FMQEADFS+P AFRAYIPA SEV+ KAR FSFTLALLGIEALDLQ VD P+E+V HHAL RD+N DD S A + L + D + S A+ R + G +G P E++E PQTLV+++WGVLLRNAC+VIPGLS G Sbjct: 595 CVSLSKLLHLDEVQCVQVLHAFLRRRNSESPRGSPPASEGLDFSSQFLLFEVRDYFRNQRLAHLYLLHELLRIDQGPDNSLHPKAEQVLGRHHPDLMRDLFELLRELFKENPPVVVSES--GQGWGG---AARKREWVAQRVAELSEVVGCMVIAGYYRYRVQGDQARLVMDMLSFMQEADFSMPPAFRAYIPAASEVSKKARSFSFTLALLGIEALDLQKVDSPDEMVLHHALLRDFNADDASISTMACKW----EQPLCQLKDPSVVCCVLSQAKRRLLIEGPSEGSP--EMIETPQTLVVVAWGVLLRNACMVIPGLSQG 906 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10152.317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10152.317.1 >prot_M-pyrifera_M_contig10152.317.1 ID=prot_M-pyrifera_M_contig10152.317.1|Name=mRNA_M-pyrifera_M_contig10152.317.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=322bp ICCTLEPPVAIIQVQCVQVLHAFLRRKNSERPRGSPPASEGLDLTSGALLback to top mRNA from alignment at M-pyrifera_M_contig10152:1014..10243+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10152.317.1 ID=mRNA_M-pyrifera_M_contig10152.317.1|Name=mRNA_M-pyrifera_M_contig10152.317.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9230bp|location=Sequence derived from alignment at M-pyrifera_M_contig10152:1014..10243+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10152:1014..10243+ >mRNA_M-pyrifera_M_contig10152.317.1 ID=mRNA_M-pyrifera_M_contig10152.317.1|Name=mRNA_M-pyrifera_M_contig10152.317.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1932bp|location=Sequence derived from alignment at M-pyrifera_M_contig10152:1014..10243+ (Macrocystis pyrifera P11B4 male)back to top |