mRNA_M-pyrifera_M_contig10152.317.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10152.317.1
Unique NamemRNA_M-pyrifera_M_contig10152.317.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10152.317.1 vs. uniprot
Match: D7FGV5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV5_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 7.960e-120
Identity = 212/323 (65.63%), Postives = 244/323 (75.54%), Query Frame = 1
Query:    4 CCTLEPPVAIIQVQCVQVLHAFLRRKNSERPRGSPPASEGLDLTSGALLFEVRDYHRNQRLSHLYLLHELLRVDQGADNDLHPKAGQVLDRS-PGLMRELLDLARELFKENPPVYGHHGVGGEGAGASVIAARKREWVAQRVSELSEVVGCMVMAGYHRYRLQGDQADLVMDMLFFMQEADFSVPVAFRAYIPAGSEVATKARIFSFTLALLGIEALDLQSVDCPEELVAHHALFRDYNVDDPSARQAARDRLGAVNEVLASMVDATK--SERSAARWRSMEAGSIQGVPNHELVEMPQTLVLLSWGVLLRNACVVIPGLSDG 963
            C +L   + + +VQCVQVLHAFLRR+NSE PRGSPPASEGLD +S  LLFEVRDY RNQRL+HLYLLHELLR+DQG DN LHPKA QVL R  P LMR+L +L RELFKENPPV       G+G G    AARKREWVAQRV+ELSEVVGCMV+AGY+RYR+QGDQA LVMDML FMQEADFS+P AFRAYIPA SEV+ KAR FSFTLALLGIEALDLQ VD P+E+V HHAL RD+N DD S    A        + L  + D +      S A+ R +  G  +G P  E++E PQTLV+++WGVLLRNAC+VIPGLS G
Sbjct:  595 CVSLSKLLHLDEVQCVQVLHAFLRRRNSESPRGSPPASEGLDFSSQFLLFEVRDYFRNQRLAHLYLLHELLRIDQGPDNSLHPKAEQVLGRHHPDLMRDLFELLRELFKENPPVVVSES--GQGWGG---AARKREWVAQRVAELSEVVGCMVIAGYYRYRVQGDQARLVMDMLSFMQEADFSMPPAFRAYIPAASEVSKKARSFSFTLALLGIEALDLQKVDSPDEMVLHHALLRDFNADDASISTMACKW----EQPLCQLKDPSVVCCVLSQAKRRLLIEGPSEGSP--EMIETPQTLVVVAWGVLLRNACMVIPGLSQG 906          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10152.317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGV5_ECTSI7.960e-12065.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10152contigM-pyrifera_M_contig10152:1014..10243 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size966
Cds size966
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10152.317.1prot_M-pyrifera_M_contig10152.317.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10152 1014..10243 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.2124407-CDS-M-pyrifera_M_contig10152:1013..11691622815513.2124407-CDS-M-pyrifera_M_contig10152:1013..1169Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 1014..1169 +
1692277445.2509058-CDS-M-pyrifera_M_contig10152:1013..11691692277445.2509058-CDS-M-pyrifera_M_contig10152:1013..1169Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 1014..1169 +
1622815513.2234411-CDS-M-pyrifera_M_contig10152:2024..21101622815513.2234411-CDS-M-pyrifera_M_contig10152:2024..2110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 2025..2110 +
1692277445.2685544-CDS-M-pyrifera_M_contig10152:2024..21101692277445.2685544-CDS-M-pyrifera_M_contig10152:2024..2110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 2025..2110 +
1622815513.7115185-CDS-M-pyrifera_M_contig10152:2754..29951622815513.7115185-CDS-M-pyrifera_M_contig10152:2754..2995Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 2755..2995 +
1692277445.276845-CDS-M-pyrifera_M_contig10152:2754..29951692277445.276845-CDS-M-pyrifera_M_contig10152:2754..2995Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 2755..2995 +
1622815513.72301-CDS-M-pyrifera_M_contig10152:4086..41401622815513.72301-CDS-M-pyrifera_M_contig10152:4086..4140Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 4087..4140 +
1692277445.2839894-CDS-M-pyrifera_M_contig10152:4086..41401692277445.2839894-CDS-M-pyrifera_M_contig10152:4086..4140Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 4087..4140 +
1622815513.7361913-CDS-M-pyrifera_M_contig10152:4974..50541622815513.7361913-CDS-M-pyrifera_M_contig10152:4974..5054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 4975..5054 +
1692277445.2915523-CDS-M-pyrifera_M_contig10152:4974..50541692277445.2915523-CDS-M-pyrifera_M_contig10152:4974..5054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 4975..5054 +
1622815513.7477245-CDS-M-pyrifera_M_contig10152:6975..71771622815513.7477245-CDS-M-pyrifera_M_contig10152:6975..7177Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 6976..7177 +
1692277445.298917-CDS-M-pyrifera_M_contig10152:6975..71771692277445.298917-CDS-M-pyrifera_M_contig10152:6975..7177Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 6976..7177 +
1622815513.7605195-CDS-M-pyrifera_M_contig10152:9428..95001622815513.7605195-CDS-M-pyrifera_M_contig10152:9428..9500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 9429..9500 +
1692277445.3090086-CDS-M-pyrifera_M_contig10152:9428..95001692277445.3090086-CDS-M-pyrifera_M_contig10152:9428..9500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 9429..9500 +
1622815513.7787414-CDS-M-pyrifera_M_contig10152:10168..102431622815513.7787414-CDS-M-pyrifera_M_contig10152:10168..10243Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 10169..10243 +
1692277445.3172393-CDS-M-pyrifera_M_contig10152:10168..102431692277445.3172393-CDS-M-pyrifera_M_contig10152:10168..10243Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10152 10169..10243 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10152.317.1

>prot_M-pyrifera_M_contig10152.317.1 ID=prot_M-pyrifera_M_contig10152.317.1|Name=mRNA_M-pyrifera_M_contig10152.317.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=322bp
ICCTLEPPVAIIQVQCVQVLHAFLRRKNSERPRGSPPASEGLDLTSGALL
FEVRDYHRNQRLSHLYLLHELLRVDQGADNDLHPKAGQVLDRSPGLMREL
LDLARELFKENPPVYGHHGVGGEGAGASVIAARKREWVAQRVSELSEVVG
CMVMAGYHRYRLQGDQADLVMDMLFFMQEADFSVPVAFRAYIPAGSEVAT
KARIFSFTLALLGIEALDLQSVDCPEELVAHHALFRDYNVDDPSARQAAR
DRLGAVNEVLASMVDATKSERSAARWRSMEAGSIQGVPNHELVEMPQTLV
LLSWGVLLRNACVVIPGLSDG*
back to top

mRNA from alignment at M-pyrifera_M_contig10152:1014..10243+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10152.317.1 ID=mRNA_M-pyrifera_M_contig10152.317.1|Name=mRNA_M-pyrifera_M_contig10152.317.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9230bp|location=Sequence derived from alignment at M-pyrifera_M_contig10152:1014..10243+ (Macrocystis pyrifera P11B4 male)
ATTTGCTGTACGCTGGAACCCCCCGTTGCTATCATTCAGGTTCAGTGTGT GCAGGTGCTACATGCCTTCCTCAGGCGCAAGAACTCCGAGCGGCCTCGCG GGTCGCCGCCTGCCTCGGAAGGGTTGGATTTGACGTCGGGTGCTCTTCTC TTTGAGGTTAGTTTGCTCTTTTGGTATTGGTCGGTTGTTTTTCCCTCTCA TTTATTTTTTTCCGCCCTTATTTCCCCTCTCCCTCCTCCTCCTCCTCCTC CTCCTCCTCCCACTACTAATCGTTACTCAGATCCGGGGTCACACAGCCGG CTCGCCTCCCCCCTCCTCGTGCCTCGCATTTTTGTGGTCGCTAGAAGAGT TCAGCCCTTTCTTCCCTTGTCGGCTCGCGTCGAATTGCGCCTACCCACGC TACGCGCTCTCGACAGTTGATCCGTTTTCATGTTCGCAAAATATTTTCAC AATCTCGCCACGGTGGGAGTCGAACTCAAGAAAAAAAGTCTAGCAGCATT CGAGGGTAACCGCTGGACCACGGGGGCGGCGGCCTGGTTGCTGTTTGCTG TTAGGAATGCGGTACGAAACACTGCGATATGAAACCAACTTCGGGACTAC CCTTTGATGCCGGCCTTTTGATCTATGCGAAACCCTTACGATAGTCTCCC GAGCTGATGATCGTCTGGACTGTGTACCCTCCCTTTTTTATCATCCCCGC TTTACGCATCCCTCCCTCCGTTTGATTCGTATGAAACCTTTGCGATATGA TACGTACCAGGTTCGGTACCACCATCGGAACCAGCGCCAGTCCCACCTGT ACTGACCGCTTATTCCATTCCCATTGAATGCATGCCCCACCTAAACCTCC CGCTTATTATCTACGAAACCTTACGATATGATACTAGGTTCGGTATATGC CACCACCGGAACCAGCGCCTGTCCCATCTGTACTTACCGCTATTTCCACC CCCATTGAATGCATGCCTCCTCCCCACTTGTTTTCTACGAAACCATACGA TATTTTACCAGGTTCGAGACTACCACCGGAACCAGCGACTGTCCCACCTG TACCTCCTCCACGAGCTTCTCAGGGTAGACCAGGGGGCTGACAACGAGTA AGAGATGCACCACACACATCGATGGTGTCTTACTTTTTTGCCAGTTTTTG GTCCACCATTCCATCTATTATCGTTACCCTGCTTCCCTTTCGTAACTCAG ATCCGGGGTCGCACGGGGGGCGCTCCTCCCCTCTTCCCCTTACCATGCAT GCCTTCCTTGTTATCGCCAGAAGAGTTGAGCATTTCGTTCCCTGGTCGAC TCTCGTCGAATGCAGATTCGCACGGTATTACGGGGGGGGTCTATAGTTAA CAGGACCTATGGCATACATAAAAACCTATATATTTAGGTATTTTTACTAG CAATATTTGGTCCTGTTAACTATGGACCCCCGTAATGGTAGTAGGCGCTT TCTTATCACTAGTGATATTTTTTTTGTCGACAGTTTCGCTTTTTCTACAA GTATTTGTTTTTTTTATCGTATGCATCAGCCCATACCCGGAGACCGGGCA AATTATCGACCGCAGCAGCCCCGGGGCTCTTTTTTCTACACGCTACCGAG CCCCCCAGCTTCACCTCCTCGCCCATCTACAACCGTGTATATATACTACC GAGCCCCCCGGCTCCACCTCCTCACCCATCTATAGTCGCCAACGAAAACT ACGAAAACCATCGCCATTGTTTTTTTTTTTGTGTGTGTCAGCCTGCACCC CAAGGCCGGGCAAGTTCTCGACCGCAGCCCGGGTCTCATGAGGGAGCTGC TCGATCTGGCGCGAGAGTTGTTCAAGGAAAACCCTCCCGTGTATGGGCAC CATGGTGTTGGTGGGGAGGGGGCGGGGGCGTCGGTGATTGCCGCGCGTAA GCGCGAGTGGGTTGCTCAGAGGGTCTCCGAGCTATCGGAGGTGGTCGGGT GCATGGTTATGGCGGGGTATCATCGATACCGGGTGAGGACAAACAAAAAC AACGTCCCATAAATTGTTCAAAACCTTCTTACATCTATTACGGGGAAACA TAGTAAATAGGACCTGCGGTAGACACAAAAACCTACATATTTCGCTATTT TTGCTGACAATTATTTGGTCCTATTTACTATGATCCCGCGCAATATTGCA TTGAACTAACAATTTTGACTCGTTTGGGCTACTAATGGTCGGTCGGTTTT ACTCGCCTGGTTACTTGCCGGGTGGCTACTTTTTTTCTTTTTTTTTTTGT CGTTAGCGTTCATTTTTATTTTTTTTTAATGTTCTTCGTTCTTTGCCCGC TGGCTACGCTTGCGGGTAGCAGGGAACGAGCGCGTGCCGTGTTCTCCCTT TTTAGCTTGGGACACCCCCGAGACTGCAAGCCAACCACAATCTGGAAGGG GAACCCCGTGAACTGTACTGAATTGATTTCACGGGCGCTTCTTGTGGGGC ATTAGTCCCGGGGTGGGCTGTTTGGTGTGGTTGGAGTTAGTTGCGAGCAC GGCACTTGCCGACGTGGCGGTGATGATGGGGGTGGTTGGTTGTGTTGGGT GTGTTGGGTGTTGTCGGTGTTGGTGTTGGCGGCGGTGTTGGTGTTGGTGA TGGCGGTGCTGGTGTCGCCGGTGTTTGTGTTGTTGTCGTTGTTGGTGGTG TTGGCGGTGTTGGTGCTGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTT GATGTTGGTTGAGTTCGTGATGGTGGAGGCGGTGATGGTGGTGATGGTGT TTTTGATCGAAATGTGAGTGTGGTGTTGGTGTTGTTGTTGTTGTTGTTGT TGTTGGCGGTGGTATTGTTGATGTTGTTGTTGTTGTTATTGTTTTTATGT TATGTTTGGAGTGCGTTTCGACACCCTTGTCGAACTCCCTCTCGCGCTGT TTGCTTACTTTTTTTTTTCACGCCAACCCCGTCCCCTATTCCCTGGTACG TGTAAACGCGCGCCCTATCCCCTAGTACGCGAAAACGTCCCCTATCCCCT GGTACGCAAACGCGTCCCCTATCCCCTGATATGCACCCCGTCCCCTATAT CCTCGTACGCAAAAACGCCTCAGTTGCAAGGAGACCAAGCGGATCTTGTG ATGGACATGCTGTTCTTCATGCAGGAGGTGAGGGGTTTAGGCCATGGCCG CGGTTAATAAGAGTTTCAGACGCTCCAAACGTGCTGGGTACGTGGAAAGC CCGTGTGATGGCATGAGGGCATGCTGTTGTAGTACCAACAGCAGTACAAC AGCAGTAGGTGTGCTGAACGAGGTCTGCTTCGTTTTCTGCGTGAGTGGTA TCGGTAAATTGTTGCACTGCCTACTGATGGCTACTGGCTGACTACTGAGT AACGATTAAAGGTAGATGATTAAATGTATCGTGGATCAATGATTTGTGCC CAATGATGAATGCCGTATTGGATGCTGATGGACGGCGTAGGATTGATGGT CATGGTCCATGATCAACAACTATTAATAGTTATGAATGATTGAGTGAGTA ATGATTTATGATCAATGATATACGATCGTTTCGAAACGCCCAGGCGGACT ATTTTTTTTGTTTTGTTGGAATCGATGGCCTTCATGGGATGATGGCCTTC AGGGCTTTCATCCAGCAGTAAATGACTACATGTTGATGGTGATTGATGAC GCGTTTATTGAGTTCTGCCCACTAATAATGACAAAAAATGCTGCTCATGA TGGATGAACGATCGGCGATCAAATGTGAACCATGAACGACTGATGATTCC AAGATCTATGTTTGCATGCAATGGTGCACGACACAATAAATATACGTATT TTTTTTCTGATTGAACGATGTCTAATATTATACGAAACGAGCGTCTCGCC AATGATGAATGCCTACATACCTCCGATGGTTGATGAATGACCGCTGTTCA ATGGTGCATAACATAACAACGACTTATGGTCCACCTGGTACGATCGTTTC GAAACGTCCAGGCGGACTTTTCTGTACCGGTGGCCTTCAGGGCGTACATC CCGGCTGGGTCGGAAGTTGCTACCAAGGCTCGCATCTTCAGGTGATGTAT TTTTTTGTTGTTGATGATTTGTGTTCGAGGCCCCGGTGTTTCAGTGCTAT ATATAACTTTGGTAGGTATGTAGGTATGTGGATCTGTTGGTCTGTTCATG CCCATTACTACAGTACTAATAACCACAAGATTTCCGGGGCTGTTCACGGG TTGTGCAAATCTCGCGGGTCGGGTCGGGTCGGGTCGGGTCGGGTCGGGTC GGGTCGGGTCGGGTCACCTGACCCGACCCCGACCCGGCGCGTGAGGTTTT GAAGACCTCCTGACCCGACCAGACCCGACCAGACCCGACCCGGCTCGGAC CCCGACCCGTGAGATTTTGACGGCTCCCTGACCCGTGAAGTGAACATGCC TTATTTTTGAACTGACGGGGCTTTTGAACCGATACGTGCGGTATGCCGTA TCGTTACGAACCCATTTTGTGCTTTAAAACGTTACATACCTCAGATAGAT CATGATCTAGATCTTGACTTAGACTACCTATTGATCGTTCCTCGCCTGCC TCTGTGGGAGGTTCTCGAGGAGGACCTGCAATACTGTATGTAGTGCAGGT CCAACCCGGGAAATATGTGCTGCTGTTAATAGTGGATGACGTAGATTGTA CGGCTCCCTCCCACTTGACAGCATAAGCTGGGCCATACAGATAAGGGATG CATGGATCTGCCCTGAAAGATCTAGATCATGATCTATCTGTAGATGATCT GTAGATGATCTGTAGATGATCTGTCCGATGCGTGCAATGTTGGTCGTTAG ATGGCTACAGCCCATTGGATGGCGTATCGGGCCTGACTGTTTTTTTCGCT CGACGTCGGTCGTCGCGTGAGGTTCAGAGCGGCTCGAGTCGAGAGCCTCA TGATCATCAGGCGATACAGTGGTATACCCAGTTTTGTGACCACCCCACGA CAAGCCCAAGAACTTGGTCTTATCTCTATTTAATATGGTTTTGTATTTTT ACTATTACGGTGGTCCATAGTTAATAGGACCTACGGTACACACAAAACCC TATATATTCCCTATTTTTACTAGCAGTATTTGGTCCTGTTTACTATGGAC CCCCGCAATACTAAAAAATGGTGCCATACCAATTCAGAGTAGATTTTTTT CTCCTGACTTAAGCCGATGCACCTGGTCTAATCTCTACGATGGCCTCAAA GCGGATGGTTTTGACCCTTTCAGGAATGCAGGTCCGTTGGGGGGATAAAC TACTCGAAATTTGAGTGGTTTGTTCGCGAAACGGGACTGCAGCCCTAAAT GAATAATGAATGGGTACACCATGCACCCCTGTACGTGTTGTGCACATGCC CTTCTGTTGTGTTGGTGCTTTACTTGTCGTTAATATTGATGTTTGCTGAT TTGCTGATGGTGTTGCTTTAATGATTATGTTGTGTTGTTGTTTTGTTGTT TTGTGTGCTTTCTTGCTGCCTCGTTTGTTCTCCGCTTTGTTTGTTTTGTG CCTGCCTGTATGTTTTTGTTTGTTTGTTGTGTGTGTCTATGTGTGTCTGT TTTGGTTTCTTGCTTTTTTCCTGGTGTTCACCAGGCGCTTGTGTGTCTGC TTGTGGCTTGGCTTCTCCTCGCTGCTGCTTGGCTGAACCGCGCAATCATC GTGCAGACGGACAGACGAAAGACTTTAACATTTTTTCGATAGCATTCGGG CGGGGGGCGGGCGGGGTATGACTACTTAGCTACAGTAGTATTTTAGTACC TGGTACCGTTTTTTCTTTCTTCTTTGCCCTCTTGATGCCCCTCCCACCTC TACCCTTGCCGTTGTGGCACGAGGATACCTCTAGCTTTTTAGGCCCCAAC TCTCCCCCCCCCCACCCCCCCCCACTTCTCCTGCAAACCCTTTCCCCCTT CCGCGAACGACTACTACAAAACACAAATGCATCCCCCCTCCCCCCCTCCA AAAATAAAACAGCTTCACGCTTGCCCTGCTGGGTATCGAAGCACTGGACC TTCAGAGCGTCGACTGCCCGGAGGAGCTAGTGGCTCACCATGCCTTGTTT AGGGACTACAACGTGGACGACCCTTCGGCTAGGCAGGCAGCTAGGGATAG GCTAGGGGCGGTGAACGAGGTGCTGGCTTCCATGGTCGACGCCACAAAGA GCGAGAGAAGCGCGGTGAGGTTAAGAAATAGCTGGGTGTGTGCCTTGAGT GCACGTCGAAAAGGACAACACGGCGATACGCACACCGCGCGTACAAAGCG CGCACCTTGCGCATACAAAAACTTACAGATCCTATTTACAAACACAGGCC TTGCGCATACGAACAACTTGCCGCGCATTCAAGCAAACAACTTGTGCACC ACACTCCTAAAAAGGCCACAATGAAAATTAGTTGGGCGAGATTTCTGAAC GACTTTGCGAAAATGCGTTTTTTTCAGTTTTATTTTTGTTGGCTTGAGGG GTCAGGCCGCGGTCTGAGGGCCTCGTTTGGCCTTGTTATACTGGTTTTTG TGCAGGGGCGGCCGGTCAAAAGGGGTCAAATCGGGAACGCAAGACCTCTT TTGGCCTATTATACTGGTTTTAGTGTGGGGACTGTCAGTCAAGGAGGTCA AATCGAAAACTCAAGCTTTTTTTCGGCGTTATTACACTGGTTTTAGTGTT GGGGGCCGTCGGTCAAGGGAGTATCCCCCCCCCCTCCCTTTCTGGGTCTC AAAAATGGGTAGCGGGGTGCCACATTATTTTTTCACGTGTACCGCTGGAT ACAGAAGTTTTCATTGTAGGAGGGGACCGCGGTTTGACCTCTTGTCTGAC CGCTCCCTCCTGTACTAAATCTGGTATATTGAGGGCAAAAAAGTATGAGA CCACGGTTTGACCGCTTGGCTGACCGCTCTCTCCTGCGCTAAAACTACTG TAGTATAATTACGGCCAAAAGAGTAGGAGACCGCGGTTTGACAGCTTGAC TGACCGCTCTTTTCTGCCCTAAAACCAGTATTTTCAAACTAAAAAGCAGG AGACTGCGGTTTGACCGCTTGACTGACCGCCCCATTAACTAAAATTAGTA TAGTTGGGTCAACAGAGGCGTTGACGTGGTTTGGCCCCTTGACTGACCGC CTCCTTCACTAAAAAGGGTATCGTTGGGCCAACAGAGGCCTTGGCGCGGT TTGGCCGCTTGACTGACCGCTCCCTCCTGCGCTAAAACTAGTGTATTGAG GGAAAAATACGCCCTTGACGCGTCCAAAAAGACAGGTTTTCTACTCTACT GTAGCATGTTTTGTGGGAAGCAGGGAGGCGGGGAGGGGTGTACCCATGCC ATGCATGACCGTACTCGTATGCCCACAAACCATCGGATCCCTACAATGCC GGGACGGAGCACGTCGGGTTTTCACGAGGGTGGGGGCGGGGCGGGTCGTG GGAGGGAGGGAGGGGTGGAGAGGGGACAGGGGGGGCATCGGTCCCTTGAC AATGCAAGAGCTTGTCCATGTAGTCGGGCGACTAAATGAAAAGAAAGCCA CTGACACCAAATAGTTTTATATAAATTGCATAAAAGACGATCTGTGACGT CGAACATTTCGTCGAAATTAATATTTGCAAGCTACGTACAACGATATAAT ATTTCGGTCGCGCGCATTATACGAGTTTTATGTAACCCCTTGGAAATATT CGGTATGTCCCTTATTGAGGGAAACAAAAAACAAATACAGCGAAAAGGCT ACTGTGAGAGACGGACAGGGATATGAGCCCCCCCCTACGATTGTTTCGTG CCGTGTTTCAGGAGAGACACGAGATGATGGTGCATCGTGTCTTTTTTACA TGTGCACACGCTAATGTGGTAGGCTCTACACACCTTGCAGCAGTAACAGT GACTCACACGTTGAATAGATCATCTACAGATAGATCATCTACAGATAGTC ATCTACAGATAGATCATCTACAGATATTTCATCGACAGGTAGATCATCTA CAGATAGATCATCTACAGATGGATCATCTACAGATAGGTCATCTACAGGT AGATCATGTACAGATAGATCATGTACAGATAGATCATCTACAGATCATTT GCCGCTATTATCAGAGCTTGTGCAGGACCTGTATGATGTGTTCAGTACAG ATCGACAACCCAAGGAAACATGTCGTAGATGCTACAGATTACACCGCTCC AACCCGGCGACATGAGCTAGATTATACAGATCAGGAATCTATCTGCCCTG AAAGTATCTATATCATGAAGTGAGAATGATCTGTAGATCATCTGTCTGAC GTGCCCAATGATTGCATAGAAGAGCGTCGTCGCCCAACCAGAGATGGGAG ACTAGCGACACACCCGCCCTCTCTTTTTTTTTTTCGTTTTTCTTTTGAGT TGTTTCTCACCTGGCAGTTTTTTTTTCTTCTTCTTTGTTTTCATTTTTGT TGACGCCCGACGCAGGCGAGATGGCGCTCGATGGAGGCCGGGTCGATTCA AGGGGTTCCGAATCATGAGCTCGTCGAGATGCCTCAGGTTCGGAGTTTTA TGAGCCCGTGGTGGTTCGTGTTTGTTTCTTGGAGAGTTCGTCGTTGTCGT CTGGTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGGTAGTGGTGGTGTTGGTGGTTGTTGTTGTTGTTGATGTTGCTTTGTTG TTGGTGTTGGTGTTATCATTGTTGTGTTTGTTGCCTGTTTTGCTGTCTCT TGTCTGGTGCTACTGTTCGTTGTGATGGTTGTTGTTATTGTCGTTGTTCG TTGTTCGTTGTCTTGTCTTCTCGCTGTCATCGTTGGTGTCGTTGTATCGT TATCGATATCGTTACCGTTGTCATTGTCACTATCGATATCATTATCATTT TTGTCTTTATCGCTATCGTTTTCGCTATCGGTATCGTTATCGTCGTGAAT ATCTATATCGTTACCGTGTCATTGTCACTATCGATATCATTATCATTTTT GTCTTTATCGCTATCGGTATCGTTATCGTCGTGAATATCGATACCGTTAT CGTTGTCCTTGTCGTCATCGTTTTTGCTGCCGTTATCGTTATCCTTACCC TTGTCGTTATCGTTTCCGCTCCCGTTATCGTTGTCTATTTTTCCCTCTTC CCCTGTGCCCCGACGCCTCCTTCTCCTCCTTCCTTCCATCCCTGCCTCCG ATCAGACCCTGGTGTTGCTCTCGTGGGGAGTTCTACTGAGAAACGCCTGC GTAGTGATTCCGGGGCTATCTGACGGGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig10152:1014..10243+

>mRNA_M-pyrifera_M_contig10152.317.1 ID=mRNA_M-pyrifera_M_contig10152.317.1|Name=mRNA_M-pyrifera_M_contig10152.317.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1932bp|location=Sequence derived from alignment at M-pyrifera_M_contig10152:1014..10243+ (Macrocystis pyrifera P11B4 male)
ATTTGCTGTACGCTGGAACCCCCCGTTGCTATCATTCAGGTTCAGTGTGT
GCAGGTGCTACATGCCTTCCTCAGGCGCAAGAACTCCGAGCGGCCTCGCG
GGTCGCCGCCTGCCTCGGAAGGGTTGGATTTGACGTCGGGTGCTCTTCTC
TTTGAGATTTGCTGTACGCTGGAACCCCCCGTTGCTATCATTCAGGTTCA
GTGTGTGCAGGTGCTACATGCCTTCCTCAGGCGCAAGAACTCCGAGCGGC
CTCGCGGGTCGCCGCCTGCCTCGGAAGGGTTGGATTTGACGTCGGGTGCT
CTTCTCTTTGAGGTTCGAGACTACCACCGGAACCAGCGACTGTCCCACCT
GTACCTCCTCCACGAGCTTCTCAGGGTAGACCAGGGGGCTGACAACGAGT
TCGAGACTACCACCGGAACCAGCGACTGTCCCACCTGTACCTCCTCCACG
AGCTTCTCAGGGTAGACCAGGGGGCTGACAACGACCTGCACCCCAAGGCC
GGGCAAGTTCTCGACCGCAGCCCGGGTCTCATGAGGGAGCTGCTCGATCT
GGCGCGAGAGTTGTTCAAGGAAAACCCTCCCGTGTATGGGCACCATGGTG
TTGGTGGGGAGGGGGCGGGGGCGTCGGTGATTGCCGCGCGTAAGCGCGAG
TGGGTTGCTCAGAGGGTCTCCGAGCTATCGGAGGTGGTCGGGTGCATGGT
TATGGCGGGGTATCATCGATACCGGCCTGCACCCCAAGGCCGGGCAAGTT
CTCGACCGCAGCCCGGGTCTCATGAGGGAGCTGCTCGATCTGGCGCGAGA
GTTGTTCAAGGAAAACCCTCCCGTGTATGGGCACCATGGTGTTGGTGGGG
AGGGGGCGGGGGCGTCGGTGATTGCCGCGCGTAAGCGCGAGTGGGTTGCT
CAGAGGGTCTCCGAGCTATCGGAGGTGGTCGGGTGCATGGTTATGGCGGG
GTATCATCGATACCGGTTGCAAGGAGACCAAGCGGATCTTGTGATGGACA
TGCTGTTCTTCATGCAGGAGTTGCAAGGAGACCAAGCGGATCTTGTGATG
GACATGCTGTTCTTCATGCAGGAGGCGGACTTTTCTGTACCGGTGGCCTT
CAGGGCGTACATCCCGGCTGGGTCGGAAGTTGCTACCAAGGCTCGCATCT
TCAGGCGGACTTTTCTGTACCGGTGGCCTTCAGGGCGTACATCCCGGCTG
GGTCGGAAGTTGCTACCAAGGCTCGCATCTTCAGCTTCACGCTTGCCCTG
CTGGGTATCGAAGCACTGGACCTTCAGAGCGTCGACTGCCCGGAGGAGCT
AGTGGCTCACCATGCCTTGTTTAGGGACTACAACGTGGACGACCCTTCGG
CTAGGCAGGCAGCTAGGGATAGGCTAGGGGCGGTGAACGAGGTGCTGGCT
TCCATGGTCGACGCCACAAAGAGCGAGAGAAGCGCGCTTCACGCTTGCCC
TGCTGGGTATCGAAGCACTGGACCTTCAGAGCGTCGACTGCCCGGAGGAG
CTAGTGGCTCACCATGCCTTGTTTAGGGACTACAACGTGGACGACCCTTC
GGCTAGGCAGGCAGCTAGGGATAGGCTAGGGGCGGTGAACGAGGTGCTGG
CTTCCATGGTCGACGCCACAAAGAGCGAGAGAAGCGCGGCGAGATGGCGC
TCGATGGAGGCCGGGTCGATTCAAGGGGTTCCGAATCATGAGCTCGTCGA
GATGCCTCAGGCGAGATGGCGCTCGATGGAGGCCGGGTCGATTCAAGGGG
TTCCGAATCATGAGCTCGTCGAGATGCCTCAGACCCTGGTGTTGCTCTCG
TGGGGAGTTCTACTGAGAAACGCCTGCGTAGTGATTCCGGGGCTATCTGA
CGGGTGAACCCTGGTGTTGCTCTCGTGGGGAGTTCTACTGAGAAACGCCT
GCGTAGTGATTCCGGGGCTATCTGACGGGTGA
back to top