mRNA_M-pyrifera_M_contig114996.3116.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A815E3P1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815E3P1_9BILA) HSP 1 Score: 92.4 bits (228), Expect = 2.680e-20 Identity = 39/68 (57.35%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 IMQYPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
+++YP +F C +TH+VM DPV+DP+G SYER AI++WLS+E TSP+T+ +LTVA L PN+AL I Q
Sbjct: 6 VVKYPATFICPITHDVMEDPVMDPDGNSYERGAIINWLSRESTSPITKKSLTVADLVPNQALAAAIEQ 73
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A815MB58_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815MB58_9BILA) HSP 1 Score: 89.4 bits (220), Expect = 5.030e-20 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 IMQYPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
+++YPE F C +THEVM DPV+DP+G SYER AI+ LS++ TSP+TR+ LTV L PN+ LL+ I Q
Sbjct: 6 VVKYPERFICPITHEVMEDPVMDPDGNSYERRAIIHRLSRDSTSPITRNPLTVGDLVPNQILLEAIEQ 73
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A6B2LVR3_9EUKA (U-box domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LVR3_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 5.030e-19 Identity = 36/66 (54.55%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 7 QYPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
+ PESF C +T E M+DPVIDP+G SYER AI +W+ Q+ TSP++R L +A L PNRAL ++I++
Sbjct: 10 EVPESFLCPITQEPMKDPVIDPDGNSYERTAIEAWIRQKGTSPISRQPLALADLRPNRALRESIQE 75
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: L8H120_ACACA (von Willebrand factor type A domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H120_ACACA) HSP 1 Score: 87.4 bits (215), Expect = 1.540e-18 Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 10 YPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTI 198
+ SF C LTHEVM DPV+DPEG SYER AI +WL Q TSP+TR+ L +A LAPNRAL + I
Sbjct: 18 FSASFICPLTHEVMTDPVVDPEGNSYERAAITAWLQQHDTSPITRAPLALADLAPNRALRNAI 80
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A7S0QWT4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QWT4_9CRYP) HSP 1 Score: 81.3 bits (199), Expect = 1.780e-18 Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 7 QYPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
Q P SF C LT E+M DPVIDPEG S+EREAI WL TSP+TRS LT +LA NRAL + I +
Sbjct: 5 QPPSSFTCPLTFEIMTDPVIDPEGNSFEREAIERWLRTHNTSPITRSRLTPDRLAANRALREAIEE 70
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A820IK77_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A820IK77_9BILA) HSP 1 Score: 84.7 bits (208), Expect = 7.620e-18 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 13 PESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
P SF C +THE+M DPVIDPEG SYER AI SWL Q++ SP+TR+ L ++ L PNRAL +I +
Sbjct: 5 PSSFLCPITHELMTDPVIDPEGNSYERSAIESWLHQQRNSPITRTQLNMSDLRPNRALRASIEE 68
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A816EXJ9_ADIRI (Hypothetical protein (Fragment) n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A816EXJ9_ADIRI) HSP 1 Score: 80.1 bits (196), Expect = 1.630e-17 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 4 MQYPES-FYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
M P S F C +THE+M DPVIDP+G SYER AI +WLS TSP+TR+ LTV L PNRAL + +
Sbjct: 1 MAEPSSTFICPITHELMNDPVIDPDGNSYERTAIEAWLSSHGTSPITRAPLTVTDLRPNRALKAAVSE 68
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A820LET2_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820LET2_9BILA) HSP 1 Score: 82.8 bits (203), Expect = 3.750e-17 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 13 PESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
P SF C +THE+M DPVIDP+G SYER AI WL Q TSP+TR+ L + L PNRAL ++I +
Sbjct: 5 PSSFLCPITHELMTDPVIDPDGNSYERSAIEDWLRQHSTSPITRTTLHLNDLRPNRALRESIEE 68
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A819J6S0_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819J6S0_9BILA) HSP 1 Score: 82.8 bits (203), Expect = 6.470e-17 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 13 PESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTIRQ 204
P SF C +THE+M DPVIDP+G SYER AI WL Q TSP+TR+ L + L PNRAL ++I +
Sbjct: 5 PSSFLCPITHELMTDPVIDPDGNSYERSAIEDWLRQHSTSPITRTTLHLNDLRPNRALRESIEE 68
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Match: A0A819MVC8_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A819MVC8_9BILA) HSP 1 Score: 82.4 bits (202), Expect = 8.830e-17 Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 7 QYPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALTVAQLAPNRALLDTI 198
Q E+F C +THE+MRDPVIDP+G SYER+AI WL Q TSP+TR+ L+ + L PNRAL I
Sbjct: 3 QPSETFICPITHELMRDPVIDPDGNSYERQAIEGWLRQNGTSPITRTPLSASDLRPNRALKAAI 66 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114996.3116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114996.3116.1 >prot_M-pyrifera_M_contig114996.3116.1 ID=prot_M-pyrifera_M_contig114996.3116.1|Name=mRNA_M-pyrifera_M_contig114996.3116.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp MQYPESFYCRLTHEVMRDPVIDPEGISYEREAILSWLSQEQTSPVTRSALback to top mRNA from alignment at M-pyrifera_M_contig114996:307..510- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114996.3116.1 ID=mRNA_M-pyrifera_M_contig114996.3116.1|Name=mRNA_M-pyrifera_M_contig114996.3116.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig114996:307..510- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114996:307..510- >mRNA_M-pyrifera_M_contig114996.3116.1 ID=mRNA_M-pyrifera_M_contig114996.3116.1|Name=mRNA_M-pyrifera_M_contig114996.3116.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig114996:307..510- (Macrocystis pyrifera P11B4 male)back to top |