mRNA_M-pyrifera_M_contig101431.299.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101431.299.1
Unique NamemRNA_M-pyrifera_M_contig101431.299.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: UPI001E38DB48 (tRNA pseudouridine(38-40) synthase TruA n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E38DB48)

HSP 1 Score: 257 bits (656), Expect = 5.680e-83
Identity = 129/211 (61.14%), Postives = 148/211 (70.14%), Query Frame = 1
Query:   10 HP-DIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDYP 639
            HP  + ++GRTD GVHA GQV+S DV +   D   + R +N    PE+  R A IV DDF ARFSA  R YR+ VLN P P PFL+ T WWV +PLDL ++RL CDPLIG HDFSSFCRRPK G GPEV+LVRRV  A W DLGDGVLRF+I   AFCHQMVRSIVG  V VGRGRR AG++ G+  A DR    + APPHGL LW V YP
Sbjct:   61 HPVTLSVAGRTDKGVHAHGQVVSLDVADPLVDLGALARAVNGICGPEISVRAATIVADDFDARFSATWRAYRYTVLNRPDPDPFLARTAWWVPEPLDLNALRLGCDPLIGSHDFSSFCRRPK-GAGPEVTLVRRVLDARWHDLGDGVLRFDIRANAFCHQMVRSIVGLLVDVGRGRRRAGQVAGIRRAGDRAGVPTVAPPHGLCLWEVGYP 270          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A5Q2RGF6_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RGF6_9ACTN)

HSP 1 Score: 253 bits (645), Expect = 2.400e-81
Identity = 121/211 (57.35%), Postives = 148/211 (70.14%), Query Frame = 1
Query:    1 LGYHPDIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVD 633
            LG   ++ ++GRTD GVHA G V+SFD P    DP+ +   +N  +QP V  R A + PD F ARFSA  R YR+ VLN  +P P L++  W+V  PLDLA+MRLACDPLIGEHDF+SFCR+PK  DG +  +VRRV  A W DLGDG+LRFEI   AFCHQMVRSIVG  V VG GRR AG++ GV+ ARDR+A+   APP GL LW V+
Sbjct:   64 LGRTVELTVAGRTDKGVHAHGNVVSFDAPAEGLDPQALRDALNKMLQPHVAVRHAAVAPDGFDARFSATARTYRYTVLNRDVPDPLLADRSWFVDAPLDLAAMRLACDPLIGEHDFTSFCRKPKRTDGADPVMVRRVRSARWDDLGDGLLRFEIRANAFCHQMVRSIVGLLVEVGLGRRHAGDVLGVIRARDRHAAGRLAPPQGLVLWHVE 274          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: UPI001AA06E5F (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA06E5F)

HSP 1 Score: 251 bits (642), Expect = 6.420e-81
Identity = 127/217 (58.53%), Postives = 148/217 (68.20%), Query Frame = 1
Query:   10 HP-DIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKS------GDG-PEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 636
            HP ++  +GRTD GVHAWGQV+SFD P A  D   + R IN      +V R+A + P DF ARFSA  R YR+ ++N P+P PFL+ T WWV  PLD+A+MRL CDPLIGEHDFSSFCRRPK        DG P  SLVRRV  A W D GDGVLRF I+ TAFCHQMVRSIVG  V VG GR+ AGE+ G+L  RDR+ +   APP GL LW V Y
Sbjct:   63 HPVELTGAGRTDRGVHAWGQVVSFDAPAAGLDLGALQRSINKLCGGTIVVREAAVAPPDFDARFSARSRTYRYTIVNRPVPDPFLAATSWWVDQPLDVAAMRLGCDPLIGEHDFSSFCRRPKDRMIGTEDDGDPGPSLVRRVIDARWDDEGDGVLRFTIEATAFCHQMVRSIVGTLVDVGLGRKRAGEVAGILRGRDRSLAGPVAPPQGLCLWRVTY 279          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A6I3F3W4_9ACTN (tRNA pseudouridine synthase A n=2 Tax=root TaxID=1 RepID=A0A6I3F3W4_9ACTN)

HSP 1 Score: 251 bits (640), Expect = 1.030e-80
Identity = 118/210 (56.19%), Postives = 150/210 (71.43%), Query Frame = 1
Query:   10 HPDIV-MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 636
            HP I+ ++GRTDAGVHAWGQV+SFD+   +ADP  + RV+N+   P +V R+  I  DDF ARFSA  R YR+ V+N P+P PFL+ T WWV  P+D+ ++ L CDPLIG HDFSSFCR+PK+    E S++RRV  A W +LGDG+LRF+I+  AFCHQMVRSIVG  V +GRGR   GE+  +LAARDR+ S   AP  GL LW V +
Sbjct:   41 HPVIITIAGRTDAGVHAWGQVVSFDIRADRADPVALARVVNMACVPAIVVRECEIAADDFDARFSARSRSYRYTVINRPLPDPFLAPTTWWVPQPIDVKALHLGCDPLIGGHDFSSFCRKPKTD--LEFSMIRRVRDARWHELGDGILRFDIEANAFCHQMVRSIVGTLVDMGRGRLRPGEMATILAARDRSLSGVVAPAQGLCLWEVGF 248          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A7Y2N713_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N713_9ACTN)

HSP 1 Score: 248 bits (633), Expect = 6.640e-80
Identity = 130/217 (59.91%), Postives = 150/217 (69.12%), Query Frame = 1
Query:    1 LGYHPDIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPK-SGDGPEVSLVRRVTRAHWS----DLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 636
            LG   +I MSGRTDAGVHA  QVLSFD  +   D  R+ + IN  + PEV+     + P  F ARFSAIGRRYR+ VLN P PSPF +   WWV  PLDL +M+ AC P++GEHDF+SFCRRPK + DG  +SLVRRV  A WS    D G   LRFEI G AFCHQMVRSI G HVAVG+GRRS  ++  VLAARDRNA+ SPAPP GL LW V Y
Sbjct:   39 LGPISEIHMSGRTDAGVHARHQVLSFDT-DTTIDATRLAKSINSRLGPEVIATSVDVAPGSFHARFSAIGRRYRYTVLNHPHPSPFSAGFEWWVPGPLDLEAMQAACAPVVGEHDFASFCRRPKPNDDGQLISLVRRVDSAAWSEDTDDSGQRRLRFEIAGAAFCHQMVRSITGLHVAVGQGRRSPADVADVLAARDRNAAPSPAPPQGLMLWDVMY 254          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A538B6R7_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538B6R7_9ACTN)

HSP 1 Score: 246 bits (628), Expect = 1.130e-78
Identity = 118/212 (55.66%), Postives = 149/212 (70.28%), Query Frame = 1
Query:    1 LGYHPDIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 636
            LGY   +  +GRTD GVHAWGQV+SFD  E   D E + + +N  + P +V RDA    + F AR SA+ RRYR+ VLN P+P PFL+ T W V  PLD  ++ LACDP+IGEHDFSSFCR P+    P+VSLVR+V  A W DLG+GVLRF+I+  AFCHQMVRS+VG  V +GRGR++AG++  ++ A DR A+  PAPPHGL LW V Y
Sbjct:   81 LGYPIGLTCAGRTDKGVHAWGQVVSFDAEEFGLDLEALQKSLNRMLGPAIVVRDAEKAHNSFDARRSAVARRYRYTVLNRPVPDPFLARTSWHVTAPLDCRALTLACDPVIGEHDFSSFCRLPE----PDVSLVRKVHDARWLDLGNGVLRFDIEAGAFCHQMVRSLVGTMVDIGRGRKTAGDMAAIIRAEDRAAASQPAPPHGLCLWEVVY 288          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: UPI001C62DF49 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62DF49)

HSP 1 Score: 244 bits (624), Expect = 3.120e-78
Identity = 125/217 (57.60%), Postives = 150/217 (69.12%), Query Frame = 1
Query:    1 LGYHPDIVMSGRTDAGVHAWGQVLSFDVPEAKA----DPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDYP 639
            LG+  +I  +GRTD GVHA GQVL+ DV EA+     D   + R +N    PEV  RD ++V D F ARFSA  RRYR+++ N P P PF +   W V  PL LA++RLACDPLIG+HDFS+FCR+PK G   E S+VRRVT A W   GDG LRFEI+ +AFCH MVRSIVG  VAVG GR +AG++RG LA+RDR  S   APPHGLTLW V YP
Sbjct:   54 LGHEVEITCAGRTDRGVHAHGQVLTVDVAEARVARPGDLAALVRSVNKMCGPEVAVRDPQLVDDSFDARFSATARRYRYRIWNHPEPDPFTARQAWHVEKPLALAALRLACDPLIGQHDFSTFCRKPK-GREVEPSMVRRVTEARWIVEGDGHLRFEIEASAFCHHMVRSIVGTMVAVGVGRMTAGDVRGALASRDRARSGDMAPPHGLTLWTVRYP 269          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A6N7FQ44_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FQ44_9ACTN)

HSP 1 Score: 242 bits (618), Expect = 2.610e-77
Identity = 118/213 (55.40%), Postives = 146/213 (68.54%), Query Frame = 1
Query:    1 LGYHPDIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDG-PEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 636
            L +   + ++GRTDAGVHAWGQV+SFD  EA  D   + + +N  + P +  R   +   DF ARFSA  RRYR+ VLN  +P PFL+ T W V   LDLA++RL CD L GE DF+SFCRRP+ G G P  SLVRRV  A W ++ +GVLRFEI+ +AFCHQMVRSIVG  V +GRGRR AGE+ G++ A DR A+  PAPPHGL LW V Y
Sbjct:   65 LRHRVTLSVAGRTDAGVHAWGQVVSFDTNEAGFDATNLQQTLNKLLGPSIAVRATSVAAPDFDARFSARSRRYRYTVLNRAVPDPFLAATAWHVPAALDLAALRLGCDALYGEQDFASFCRRPREGQGHPPASLVRRVLDAGWGEVDEGVLRFEIEASAFCHQMVRSIVGTLVDMGRGRRRAGEMAGIIRAADRAAAGQPAPPHGLCLWLVRY 277          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A7K0JT79_9ACTN (tRNA pseudouridine synthase (Fragment) n=1 Tax=Acidiferrimicrobium australe TaxID=2664430 RepID=A0A7K0JT79_9ACTN)

HSP 1 Score: 240 bits (612), Expect = 1.540e-76
Identity = 119/207 (57.49%), Postives = 145/207 (70.05%), Query Frame = 1
Query:   16 DIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 636
            ++V +GRTDAGVHAWGQV++ DV  A AD   + R +N  +  EVV R A      F AR SA  RRYR+ VLN P+  PF ++  W V  PLDLA+MRLACDPL GEHDF+SFCRRP     PE SLVRRV  A W D GDGVLRFEI+ ++FCHQMVRS+VG  V VG+G++ AGE+ G++ ARDR+A+   APP GL LW V Y
Sbjct:   64 EMVCAGRTDAGVHAWGQVVTLDV-RAGADLRALVRSLNRALHGEVVVRAAAWAEPGFDARHSATSRRYRYSVLNRPVADPFRAQVTWHVERPLDLAAMRLACDPLFGEHDFASFCRRP----APEASLVRRVGDARWVDEGDGVLRFEIEASSFCHQMVRSVVGMMVEVGKGKKRAGEVAGIIGARDRSAAGGMAPPQGLCLWQVGY 265          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A3M2GE01_ACTSX (tRNA pseudouridine synthase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GE01_ACTSX)

HSP 1 Score: 239 bits (611), Expect = 2.260e-76
Identity = 116/215 (53.95%), Postives = 148/215 (68.84%), Query Frame = 1
Query:    1 LGYHPDIVMSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDYPDD 645
            LG+  D+  +GRTD GVHA GQV+SFD   ++ DP R+ + +N  + P++  R       DF AR S + R YR++VLNTP+  P L++ +W V  PLDLA+MRLACDP+IGEHDFS+FCRR +  D  + SL R+V  A W   G GVLRF++  TAFCHQMVR++VG  VAVG GRR AGE+R  L ARDR+A  SPAPP GL LW+  YP D
Sbjct:   54 LGHEIDLSCAGRTDKGVHARGQVVSFDADASRLDPPRLAQALNRMLAPDIAVRSVAPAAPDFDARHSCVARSYRYRVLNTPVHDPLLADVVWHVARPLDLAAMRLACDPIIGEHDFSTFCRRRR--DRRDESLTRQVLAADWRREG-GVLRFDVTATAFCHQMVRALVGHMVAVGAGRRRAGEMRAALEARDRHAVASPAPPQGLVLWSAHYPPD 265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E38DB485.680e-8361.14tRNA pseudouridine(38-40) synthase TruA n=2 Tax=Rh... [more]
A0A5Q2RGF6_9ACTN2.400e-8157.35tRNA pseudouridine synthase A n=1 Tax=Actinomarini... [more]
UPI001AA06E5F6.420e-8158.53tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Rh... [more]
A0A6I3F3W4_9ACTN1.030e-8056.19tRNA pseudouridine synthase A n=2 Tax=root TaxID=1... [more]
A0A7Y2N713_9ACTN6.640e-8059.91tRNA pseudouridine synthase A n=1 Tax=Acidimicrobi... [more]
A0A538B6R7_9ACTN1.130e-7855.66tRNA pseudouridine synthase A n=1 Tax=Actinomyceti... [more]
UPI001C62DF493.120e-7857.60tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Ia... [more]
A0A6N7FQ44_9ACTN2.610e-7755.40tRNA pseudouridine synthase A n=1 Tax=Acidimicrobi... [more]
A0A7K0JT79_9ACTN1.540e-7657.49tRNA pseudouridine synthase (Fragment) n=1 Tax=Aci... [more]
A0A3M2GE01_ACTSX2.260e-7653.95tRNA pseudouridine synthase (Fragment) n=1 Tax=Act... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101431contigM-pyrifera_M_contig101431:22..666 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score195.3
Seed ortholog evalue2.9e-47
Seed eggNOG ortholog1313172.YM304_08770
Preferred nametruA
KEGG koko:K06173
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
EggNOG OGs2GJ6C@201174,4CNBD@84992,COG0101@1,COG0101@2
EC5.4.99.12
COG Functional cat.J
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons1
Model size645
Cds size621
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.2511613-CDS-M-pyrifera_M_contig101431:21..6421622815512.2511613-CDS-M-pyrifera_M_contig101431:21..642Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101431 22..642 -
1692277444.8768485-CDS-M-pyrifera_M_contig101431:21..6421692277444.8768485-CDS-M-pyrifera_M_contig101431:21..642Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101431 22..642 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.264535-UTR-M-pyrifera_M_contig101431:642..6661622815512.264535-UTR-M-pyrifera_M_contig101431:642..666Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101431 643..666 -
1692277444.8869474-UTR-M-pyrifera_M_contig101431:642..6661692277444.8869474-UTR-M-pyrifera_M_contig101431:642..666Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101431 643..666 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101431.299.1prot_M-pyrifera_M_contig101431.299.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101431 22..642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101431.299.1

>prot_M-pyrifera_M_contig101431.299.1 ID=prot_M-pyrifera_M_contig101431.299.1|Name=mRNA_M-pyrifera_M_contig101431.299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIV
PDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACD
PLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTA
FCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLW
AVDYPDD
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mRNA from alignment at M-pyrifera_M_contig101431:22..666-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101431.299.1 ID=mRNA_M-pyrifera_M_contig101431.299.1|Name=mRNA_M-pyrifera_M_contig101431.299.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=645bp|location=Sequence derived from alignment at M-pyrifera_M_contig101431:22..666- (Macrocystis pyrifera P11B4 male)
CTCGGCTATCACCCCGACATCGTCATGTCCGGTCGAACCGATGCCGGGGT CCACGCCTGGGGTCAGGTGTTGTCGTTCGACGTGCCAGAAGCCAAGGCCG ACCCCGAGCGCATCACGAGGGTCATCAACGTCGGCATGCAGCCCGAGGTG GTCTGTCGTGATGCCAGGATCGTCCCCGACGACTTCAGCGCTCGCTTCTC GGCGATCGGGCGCCGTTATCGCTTCCAAGTGCTCAACACCCCGATGCCGA GCCCGTTCCTCTCCGAGACCATGTGGTGGGTCGGCGACCCGCTCGATCTT GCATCGATGCGTCTGGCCTGCGATCCCCTGATCGGCGAGCACGATTTCTC GTCGTTCTGTCGACGCCCCAAGAGCGGCGACGGTCCCGAGGTCTCGTTGG TGCGTCGGGTCACCCGAGCCCACTGGAGCGACCTGGGGGACGGGGTGCTC CGCTTCGAGATCGACGGCACGGCGTTCTGTCATCAGATGGTCCGCAGCAT CGTCGGCTTCCACGTCGCCGTCGGCCGCGGGCGACGTTCGGCCGGTGAGC TCCGAGGGGTGCTCGCAGCGCGCGACCGCAATGCCTCGGTCTCGCCCGCG CCGCCCCACGGGCTGACGCTCTGGGCGGTCGATTATCCGGACGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101431:22..666-

>mRNA_M-pyrifera_M_contig101431.299.1 ID=mRNA_M-pyrifera_M_contig101431.299.1|Name=mRNA_M-pyrifera_M_contig101431.299.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig101431:22..666- (Macrocystis pyrifera P11B4 male)
ATGTCCGGTCGAACCGATGCCGGGGTCCACGCCTGGGGTCAGGTGTTGTC
GTTCGACGTGCCAGAAGCCAAGGCCGACCCCGAGCGCATCACGAGGGTCA
TCAACGTCGGCATGCAGCCCGAGGTGGTCTGTCGTGATGCCAGGATCGTC
CCCGACGACTTCAGCGCTCGCTTCTCGGCGATCGGGCGCCGTTATCGCTT
CCAAGTGCTCAACACCCCGATGCCGAGCCCGTTCCTCTCCGAGACCATGT
GGTGGGTCGGCGACCCGCTCGATCTTGCATCGATGCGTCTGGCCTGCGAT
CCCCTGATCGGCGAGCACGATTTCTCGTCGTTCTGTCGACGCCCCAAGAG
CGGCGACGGTCCCGAGGTCTCGTTGGTGCGTCGGGTCACCCGAGCCCACT
GGAGCGACCTGGGGGACGGGGTGCTCCGCTTCGAGATCGACGGCACGGCG
TTCTGTCATCAGATGGTCCGCAGCATCGTCGGCTTCCACGTCGCCGTCGG
CCGCGGGCGACGTTCGGCCGGTGAGCTCCGAGGGGTGCTCGCAGCGCGCG
ACCGCAATGCCTCGGTCTCGCCCGCGCCGCCCCACGGGCTGACGCTCTGG
GCGGTCGATTATCCGGACGATATGTCCGGTCGAACCGATGCCGGGGTCCA
CGCCTGGGGTCAGGTGTTGTCGTTCGACGTGCCAGAAGCCAAGGCCGACC
CCGAGCGCATCACGAGGGTCATCAACGTCGGCATGCAGCCCGAGGTGGTC
TGTCGTGATGCCAGGATCGTCCCCGACGACTTCAGCGCTCGCTTCTCGGC
GATCGGGCGCCGTTATCGCTTCCAAGTGCTCAACACCCCGATGCCGAGCC
CGTTCCTCTCCGAGACCATGTGGTGGGTCGGCGACCCGCTCGATCTTGCA
TCGATGCGTCTGGCCTGCGATCCCCTGATCGGCGAGCACGATTTCTCGTC
GTTCTGTCGACGCCCCAAGAGCGGCGACGGTCCCGAGGTCTCGTTGGTGC
GTCGGGTCACCCGAGCCCACTGGAGCGACCTGGGGGACGGGGTGCTCCGC
TTCGAGATCGACGGCACGGCGTTCTGTCATCAGATGGTCCGCAGCATCGT
CGGCTTCCACGTCGCCGTCGGCCGCGGGCGACGTTCGGCCGGTGAGCTCC
GAGGGGTGCTCGCAGCGCGCGACCGCAATGCCTCGGTCTCGCCCGCGCCG
CCCCACGGGCTGACGCTCTGGGCGGTCGATTATCCGGACGAT
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