mRNA_M-pyrifera_M_contig114202.2960.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A7S1GAV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAV0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.670e-20 Identity = 48/118 (40.68%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 4 AFLQTPSGTSFDPEADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
AF P + +AD ++ R + K S+ NS+N FL +FKL +++S P +++VTGTL +++ F ++F +V +GFA+AHM+ FG V G+RN +SS YTL++SLLG+F
Sbjct: 407 AFFCLPDRDTIALDADVFY-QFRMASVYKSLSLYFNSLNAFLCWFKLVRYLSYIPRFALVTGTLVKSARGVSGFGVVFCVVFYGFAAAHMMTFGARVHGYRNLTSSVYTLLKSLLGEF 523
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A7S1CC16_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC16_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.480e-19 Identity = 44/105 (41.90%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 43 EADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
++DT++ S R+ A K S+ N+ N FLA+FKLT ++S P +++VTGTL R+ F++IF ++ +GF++AHM+ FG ++EG+RN + ++L+++LLGDF
Sbjct: 496 DSDTFY-SFRSAAVYKALSLYCNACNAFLAWFKLTSYLSYFPRFALVTGTLRRSLQAVGGFIVIFCVLFYGFSAAHMMTFGPSLEGYRNMMQTAFSLLRALLGDF 599
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A813B7D7_9DINO (Pkd2 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B7D7_9DINO) HSP 1 Score: 89.4 bits (220), Expect = 2.290e-19 Identity = 46/114 (40.35%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 16 TPSGTSFDPEADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
TP S ++D Y+ A K S+++N IN FL +F+L ++++ PE ++V GTL R++ F +IF++V +GFA+AHM+ FG ++ FRN ++S +TLI+SLLG+F
Sbjct: 88 TPDAASVVVDSDVYY-DFYVAALWKSTSVMLNGINAFLCWFRLVRYLAHLPELALVIGTLERSARRLASFGVIFVVVFYGFAAAHMMTFGFKLKEFRNLTASGFTLIESLLGEF 200
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A0L0DRG2_THETB (Polycystic kidney disease 2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DRG2_THETB) HSP 1 Score: 75.1 bits (183), Expect = 2.350e-13 Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = 1
Query: 1 IAFLQTPSGTSFDPEADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
IA + T + DP A T F + +T+ L I + N F+ +FK+ K+ P V+ T++R+ + F+ + + V+FGFA A +LAFG++VE FR+ + YTL++ LLGDF
Sbjct: 358 IALVATFEKMNLDPRATTRFYNFQTLVLLNSAENNILASNAFILWFKVYKYTKFFPPMRTVSDTIARSIQNTIGFVAVVMFVLFGFAQAGVLAFGSDVEDFRSFIDTFYTLLRLLLGDF 476
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A0L0DI24_THETB (Polycystic kidney disease 2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DI24_THETB) HSP 1 Score: 67.8 bits (164), Expect = 8.630e-11 Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 1 IAFLQTPSGTSFDPEADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
IA L + DP F + + ++ L I ++N F+ +FK+ K+ P ++ T+S++ + F+ + V+FGFA A +LAFGT+V GF + +TL++SLLGDF
Sbjct: 380 IAILIKLNNLEVDPTNTRKFYNFQPISLLNSAEQNILAVNAFILWFKVFKYTKFLPGMDIIAETVSKSIRNTVSFVAMMAFVLFGFAQAGVLAFGTDVPGFHTFIDTFFTLLRSLLGDF 498
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A7S3DBA3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DBA3_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 1.570e-10 Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 43 EADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
EAD L + NL + +N FK K+ I P ++++ TL R++ F +F +V+FGFA AH LA+G+N+ FRN S +TL ++LLGDF
Sbjct: 310 EADIQLYQLSDLVNLAQ---NVNXXXXXXXXFKSFKYFRIYPRLTILSNTLYRSASDVATFSAMFCVVLFGFAVAHYLAYGSNIYEFRNWQQSAFTLFRALLGDF 411
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A7S3DBS8_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DBS8_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 1.590e-10 Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 43 EADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
EAD L + NL + +N FK K+ I P ++++ TL R++ F +F +V+FGFA AH LA+G+N+ FRN S +TL ++LLGDF
Sbjct: 493 EADIQLYQLSDLVNLAQ---NVNXXXXXXXXFKSFKYFRIYPRLTILSNTLYRSASDVATFSAMFCVVLFGFAVAHYLAYGSNIYEFRNWQQSAFTLFRALLGDF 594
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A0L0D9F5_THETB (Polycystin 2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9F5_THETB) HSP 1 Score: 62.4 bits (150), Expect = 6.750e-9 Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 43 EADTYFASLRTVANLKRFSILINSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
+++ + +L+ VA + I IN+IN L + K K+++ ++ TL RA+ + F+++FLI+ FG+A A + F +VEGFR S +L+ S+LG+F
Sbjct: 384 KSNAAYFNLQGVALMATQEININAINMLLCWIKTLKYLNHFDRIHQLSETLVRAAADTVLFMIMFLIIFFGYAQAGYMMFSADVEGFRTIFRSMESLVLSILGEF 488
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Match: A0A7S0N1G4_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N1G4_9CRYP) HSP 1 Score: 50.4 bits (119), Expect = 9.830e-5 Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 109 NSINCFLAFFKLTKFVSISPEYSMVTGTLSRASGPALRFLLIFLIVIFGFASAHMLAFGTNVEGFRNASSSTYTLIQSLLGDF 357
N+I +L F K+VS E + ++ TL+RA FL+IF VIF +A A ++FGT++ + S+ + L ++LLGDF
Sbjct: 165 NNIFVWLRAFAFLKYVS--KEVANLSYTLTRAGKDCALFLVIFCFVIFAYAQAFHISFGTDISDYSTLLSAIFGLFKTLLGDF 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114202.2960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114202.2960.1 >prot_M-pyrifera_M_contig114202.2960.1 ID=prot_M-pyrifera_M_contig114202.2960.1|Name=mRNA_M-pyrifera_M_contig114202.2960.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp IAFLQTPSGTSFDPEADTYFASLRTVANLKRFSILINSINCFLAFFKLTKback to top mRNA from alignment at M-pyrifera_M_contig114202:3..359- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114202.2960.1 ID=mRNA_M-pyrifera_M_contig114202.2960.1|Name=mRNA_M-pyrifera_M_contig114202.2960.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig114202:3..359- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114202:3..359- >mRNA_M-pyrifera_M_contig114202.2960.1 ID=mRNA_M-pyrifera_M_contig114202.2960.1|Name=mRNA_M-pyrifera_M_contig114202.2960.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig114202:3..359- (Macrocystis pyrifera P11B4 male)back to top |