mRNA_M-pyrifera_M_contig114056.2929.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A3C2A2J3_9BACT (Uncharacterized protein n=3 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3C2A2J3_9BACT) HSP 1 Score: 192 bits (487), Expect = 1.230e-58 Identity = 90/187 (48.13%), Postives = 124/187 (66.31%), Query Frame = 1
Query: 1 IPLLSRKKRAPRQIIDESWSTRDAILDSDVNLFCWKRSMETTISGYLEQLLEKELSPI-IFHTTIGELDKKVANERLSWDQSSLQTGTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKSNDQIVRDVSKIRRMDTCEVGILKGEVPN 558
+ LLS K PRQ++ + W R+ IL VNL+CW+R M I +L Q + ++L I T + ++ R +W+ G FWQD+ + DFLA+S + SG +HLKV+ D+AC KFHTDGY LRLFTTY G+GTEWLPERA NR+ LGK+N++IV+D + ++RM+ +VGILKGEVPN
Sbjct: 7 LSLLSGKTLPPRQVLSDRWEDRETILQPQVNLYCWQRPMNPAILAHLGQQMRQDLPAISCLRVTQKHIAAQLGEARTAWEPEPSHGGDSFWQDLIMITRDFLAFSKNGSGQIHLKVVRDDACRKFHTDGYRLRLFTTYYGRGTEWLPERATNRAALGKNNEKIVKDPALVKRMEPFQVGILKGEVPN 193
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: UPI00162495DE (DUF1826 domain-containing protein n=1 Tax=Fulvivirga aurantia TaxID=2529383 RepID=UPI00162495DE) HSP 1 Score: 180 bits (457), Expect = 3.920e-54 Identity = 86/186 (46.24%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 1 IPLLSRKKRAPRQIIDESWSTRDAILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQSSLQTGTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKSNDQIVRDVSKIRRMDTCEVGILKGEVPN 558
IP R AP+Q+ W R+ IL VNLFCWKRS++ +IS Y+++ E PI + L +++ +L W S + FWQDV +++ DFL +S ++GT+HLKVI+++AC KFH DGY LRLF TY G GTEWLPE AVNRS LG N++IV++ ++R+ T V ILKG++PN
Sbjct: 7 IPFYKRSTNAPKQVTSSKWFHRNTILTDQVNLFCWKRSLDPSISQYIKKTAALEPEPIRRYVDRNNLHEQIEAAKLEW--SHIPDSQPFWQDVYKIVNDFLGFSKTETGTLHLKVIDNDACRKFHVDGYALRLFVTYHGPGTEWLPEGAVNRSALGTVNERIVKNKEAVQRIPTGHVAILKGQLPN 190
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A3B8ISH0_9BACT (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8ISH0_9BACT) HSP 1 Score: 149 bits (375), Expect = 1.190e-42 Identity = 66/117 (56.41%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 208 KVANERLSWDQSSLQTGTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKSNDQIVRDVSKIRRMDTCEVGILKGEVPN 558
++ R +W+ G FWQD+ + DFLA+S + SG +HLKV+ D+AC KFHTDGY LRLFTTY G+GTEWLPERA NR+ LGK+N++IV+D + ++RM+ +VGILKGEVPN
Sbjct: 4 QLGEARTAWEPEPSHGGDSFWQDLIMITRDFLAFSKNGSGQIHLKVVRDDACRKFHTDGYRLRLFTTYYGRGTEWLPERATNRAALGKNNEKIVKDPALVKRMEPFQVGILKGEVPN 120
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: UPI000D6E97C9 (DUF1826 domain-containing protein n=1 Tax=Reichenbachiella versicolor TaxID=1821036 RepID=UPI000D6E97C9) HSP 1 Score: 147 bits (372), Expect = 3.000e-41 Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 1 IPLLSRKKRAPRQIIDESWSTRDAILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQ---SSLQTGTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKSNDQIVRDVSKIRRMDTCEVGILKGE 549
IP L P Q+ +SW I SDVNLFCW R + +IS Y+ + + +S I ++ + W+ +S +G FW D+ L DFL + +HL +++D CT+FH D + +LF TY G G EWLPE+AVNR LGKSN+ I++D S+I++M+T EVGILKG+
Sbjct: 7 IPSLDSILGGPVQVSSKSWENHQIIKQSDVNLFCWTRDYDQSISSYIYEAVINNVSEINVKVETASIEDILITASNQWNSIISTSNTSGNDFWNDILFLTTDFLKLTEKPGCNLHLGIVDDETCTQFHIDQFDYKLFCTYYGSGIEWLPEKAVNREGLGKSNELIIKDSSEIQKMETFEVGILKGD 192
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A385SSQ1_9BACT (DUF1826 domain-containing protein n=2 Tax=Chryseolinea soli TaxID=2321403 RepID=A0A385SSQ1_9BACT) HSP 1 Score: 108 bits (270), Expect = 4.720e-26 Identity = 65/163 (39.88%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 73 ILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQSSLQTGTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGK-SNDQIVRDVSKIRRMDTCEVGILKGEVPN 558
I D VN +KR ++ I ++ L+E + + I T + K +A RLS D + L F QD+ + F + Q + LKV+ D+AC KFHTD Y LRL TY G GTEW+ +R VN+ +L SN I+RD SK+++ + EV ILKGEVP+
Sbjct: 27 IHDPYVNFVYYKRPIDDDIELFIWYLIENDFNGISESVTPHNVAKTLA-ARLSNDDAHLLWKRKFMQDILNITQVFFNITKAQQIQLILKVVSDDACRKFHTDAYDLRLLCTYQGSGTEWIEDRYVNQKKLVTGSNKDIIRDFSKVKQTEPFEVAILKGEVPS 188
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A6N4EAA0_9RHOO (Uncharacterized protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EAA0_9RHOO) HSP 1 Score: 108 bits (269), Expect = 1.720e-25 Identity = 62/166 (37.35%), Postives = 93/166 (56.02%), Query Frame = 1
Query: 73 ILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQSSLQTGTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKS-NDQIVRDVSKIRRMDTCEVGILKGEVPNGSN 567
IL +VNL +KR+ + I Y+ L+++ I L ++N+ + +SL + +D+ + + F + + LK++ D+AC KFHTD Y LRL TY GKGTEW+ +R VNR +L + N I+RD +KIR M+ EV ILKGEVP+ N
Sbjct: 69 ILHPNVNLVYYKRTPDREIDSYIRLLMQRPFKGITTVINQQNLATVISNQLMDVGSTSLGKSRM-QEDIIAMASVFFKITGAAHLRLILKIVADDACRKFHTDAYDLRLLCTYSGKGTEWVNDRFVNRKKLFRGENKDIIRDATKIRCMEPFEVAILKGEVPSRPN 233
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A7Y4R2N5_9BACT (DUF1826 domain-containing protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4R2N5_9BACT) HSP 1 Score: 105 bits (263), Expect = 5.060e-25 Identity = 62/178 (34.83%), Postives = 95/178 (53.37%), Query Frame = 1
Query: 25 RAPRQIIDESWSTRDAILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQSSLQT--GTLFWQDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRL-GKSNDQIVRDVSKIRRMDTCEVGILKGE 549
R P ++ + + I D +VN W+R + I + LL + T + +++ E +D+S++ T L D+ L FL+ + ++LK + D+AC KFHTD Y LRL TY+G GTEW+ +R VNR RL G N+ I++D SK++ M EVGIL+GE
Sbjct: 10 RKPYSLLVPAMLDLEKISDPEVNFVHWQRLPDEDIHQFGNALLTSAFTGFSLTATAQTVREQLQEE---FDKSAIHTVGKLLLVDDMVALTCQFLSITGQPQTRLYLKAVSDDACRKFHTDRYDLRLLCTYVGAGTEWIDDRYVNRHRLMGGDNESIIKDFSKVKCMQPFEVGILRGE 184
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A2T4DQG3_9BACT (Uncharacterized protein n=2 Tax=Marivirga lumbricoides TaxID=1046115 RepID=A0A2T4DQG3_9BACT) HSP 1 Score: 104 bits (259), Expect = 2.130e-24 Identity = 63/187 (33.69%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 7 LLSRKKRAPRQIIDESW-STRDAILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQSSLQTGTLFW-----QDVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKSNDQIVRDVSKIRRMDTCEVGILKGE 549
+L+ K+ IDE W + +A ++D NL W+R + I ++ L + IG +++ + +S+L T D+ L FL + ++ +HL+++ DNAC+KFH DGY RL TY G GT+WL + V R LGK+N IV++ SKI +M EVG+LKGE
Sbjct: 5 MLNILKKKLNYTIDEDWIAIEEAFHNADFNLVVWRRGINPNIVRLIKFLYTTNFRKLQQKINIGTIEEDLTFTL----KSNLPTSPFISYEDLKDDLCLLCYHFLQLTGKENVDMHLRIVTDNACSKFHVDGYESRLLCTYDGAGTQWLSDDNVRRHFLGKTNSDIVKNESKIMQMQPFEVGLLKGE 187
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A395LZS2_9BACT (DUF1826 domain-containing protein n=1 Tax=Candidatus Thermochlorobacter aerophilum TaxID=1868324 RepID=A0A395LZS2_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 6.260e-20 Identity = 60/163 (36.81%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 70 AILDSDVNLFCWKRSMETTISGYLEQLLEKELSPIIFHTTIGELDKKVANERLSWDQSSLQTGTLFWQDVSRLIADFLAYSSDQSGT-VHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRLGKSNDQIVRDVSKIRRMDTCEVGILKGEVP 555
AI + NL WKR I +L + +++ I ++ + LS + + L D+++ IA+F A +D + +L+ I + C KFH D YPLRL TY+GKGTE+L VNR GK+ND+IVRD K+RR++ +V ILKGE P
Sbjct: 22 AIFTPECNLAVWKRQPNKAIEAFLMKHRHEDIH--ICKVLSARDVEQTLRQELSAFEDDIGKEALI-ADIAQ-IANFFAELTDANELHFYLETIRTDQCRKFHRDFYPLRLLCTYIGKGTEYLENDNVNRD--GKTNDEIVRDWQKVRRLNAFDVAILKGEAP 178
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Match: A0A3B8WDV4_9BACT (DUF1826 domain-containing protein (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8WDV4_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 1.800e-19 Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 1
Query: 274 DVSRLIADFLAYSSDQSGTVHLKVIEDNACTKFHTDGYPLRLFTTYLGKGTEWLPERAVNRSRL-GKSNDQIVRDVSKIRRMDTCEVGILKGE 549
D+S + F+ + + LKV+ D+AC +FHTD Y LRL TY G GTEW P+ VNR +L G +ND+I+RD S+I R+ +V ILKGE
Sbjct: 1 DLSTITRAFIQITGRSKVKLILKVVSDDACERFHTDRYDLRLLCTYYGPGTEWTPDDNVNRKKLMGGTNDEIIRDWSRINRLQQFDVAILKGE 93 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114056.2929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114056.2929.1 >prot_M-pyrifera_M_contig114056.2929.1 ID=prot_M-pyrifera_M_contig114056.2929.1|Name=mRNA_M-pyrifera_M_contig114056.2929.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp IPLLSRKKRAPRQIIDESWSTRDAILDSDVNLFCWKRSMETTISGYLEQLback to top mRNA from alignment at M-pyrifera_M_contig114056:4..570- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114056.2929.1 ID=mRNA_M-pyrifera_M_contig114056.2929.1|Name=mRNA_M-pyrifera_M_contig114056.2929.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig114056:4..570- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114056:4..570- >mRNA_M-pyrifera_M_contig114056.2929.1 ID=mRNA_M-pyrifera_M_contig114056.2929.1|Name=mRNA_M-pyrifera_M_contig114056.2929.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig114056:4..570- (Macrocystis pyrifera P11B4 male)back to top |