mRNA_M-pyrifera_M_contig101364.292.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A7S0D8H3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D8H3_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 5.900e-8 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDVAAV-DLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLSRLAK 309 F S+ R +FL+ AR ++ SL G GPDGE L D+A + D G++ D FLH+SGVHGAEG+AGSAIQ L R+++ Sbjct: 18 FSSSYRAARTKFLDVAR-EAHAKIISLE-LEGVRGPDGEVLTIDIAILGDHGTK-----------DPANVFLHSSGVHGAEGFAGSAIQIDFLRRVSR 102
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: UPI001E4F24AE (M14 family metallopeptidase n=1 Tax=Streptomyces sp. UNOC14_S4 TaxID=2872340 RepID=UPI001E4F24AE) HSP 1 Score: 57.4 bits (137), Expect = 2.010e-7 Identity = 40/95 (42.11%), Postives = 45/95 (47.37%), Query Frame = 1 Query: 13 GGFGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLS 297 G F S+AE R FL R R S A GP GEPL TDVA + P + L SG HG EGYAGSA+QCALL+ Sbjct: 7 GFFSESYAEARSAFL--TRATARGAALSSHRNTRATGPGGEPLYTDVARIG-------------PPGARRVVLCVSGTHGIEGYAGSALQCALLA 86
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A813AEC1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AEC1_9DINO) HSP 1 Score: 55.8 bits (133), Expect = 6.730e-7 Identity = 40/99 (40.40%), Postives = 48/99 (48.48%), Query Frame = 1 Query: 4 RERGGFGRSFAECRDRFLEAARCLPRCRLYSL--APFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALL 294 R+ G F ++ R FL AA+ +P CR SL GP GE L +A V S P FLHTSG+HG EGYAGSAIQ +L Sbjct: 21 RDDGYFHATYHTARQDFLAAAQTVPHCRTLSLRIGEEEDLRGPFGEELCITLAIV------RSPDDEEEPAQPSAVFLHTSGLHGVEGYAGSAIQIKML 113
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: UPI001EE1705C (M14 family metallopeptidase n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=UPI001EE1705C) HSP 1 Score: 54.7 bits (130), Expect = 1.790e-6 Identity = 40/94 (42.55%), Postives = 50/94 (53.19%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAAR-CLPRCRLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLS 297 F RS+AE R +FL+AAR C + P VG DGE L DVA LG++ D+P L TSG HGAEG+ GS Q A+L+ Sbjct: 16 FARSYAEARQKFLDAARGCGAALTEF---PHPTEVGRDGETLAMDVAW--LGAQ-----------DAPRVLLVTSGTHGAEGFCGSGAQVAMLA 93
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A535N536_9CHLR (DUF2817 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535N536_9CHLR) HSP 1 Score: 54.3 bits (129), Expect = 2.440e-6 Identity = 40/92 (43.48%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALL 294 F S+ E R +FL AA R + SL P +GA GP GEPL+TDV V G PT++ + TSGVHG EG+ GSA Q L Sbjct: 10 FSESYTEARQKFLAAADDA-RLAVESL-PNSGAQGPGGEPLLTDV--VRAG-----------PTEAERIVVATSGVHGVEGFCGSACQIGFL 86
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: UPI00126A49AA (DUF2817 domain-containing protein n=1 Tax=Sphingomonas sp. ERG5 TaxID=1381597 RepID=UPI00126A49AA) HSP 1 Score: 53.5 bits (127), Expect = 4.550e-6 Identity = 37/94 (39.36%), Postives = 48/94 (51.06%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLSR 300 F S+AE R+RFL AA+ + P A GP GE L+ DVA + +SP + +SGVHG EGYAGSA+Q L+R Sbjct: 15 FSASYAEARERFLAAAQASDATIAHFQCP---ANGPSGEALMMDVAYIK--------------GESPDIVVISSGVHGVEGYAGSAVQIDTLTR 91
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A2E9CB62_9EURY (Uncharacterized protein n=2 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E9CB62_9EURY) HSP 1 Score: 53.5 bits (127), Expect = 4.570e-6 Identity = 42/99 (42.42%), Postives = 48/99 (48.48%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRC--RLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLSRLAK 309 F S+AE RFL A L ++ + G GPDGEPL DVA V GS S L TSGVHG EGY GSAIQ A++ L K Sbjct: 7 FANSYAEAAGRFLIACDELREAGHKVENERLEIGMTGPDGEPLCIDVAIV--GSL-----------QSGKVLLSTSGVHGVEGYPGSAIQLAVMDDLCK 92
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A2D7AUV9_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D7AUV9_9EURY) HSP 1 Score: 51.2 bits (121), Expect = 6.090e-6 Identity = 41/97 (42.27%), Postives = 48/97 (49.48%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRC--RLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLSRL 303 F S+AE RFL A L R+ + G GP GEPL DVA V GS +S L +SGVHG EGY GSAIQ A++S L Sbjct: 7 FANSYAEAAGRFLIACDDLRDAGHRVSNERLEIGMTGPAGEPLCIDVAVV--GSL-----------ESGKVLLSSSGVHGVEGYPGSAIQLAIMSDL 90
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A7S2X6X9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X6X9_9EUKA) HSP 1 Score: 53.1 bits (126), Expect = 6.320e-6 Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLSRL 303 F + + + RF++ A+ + ++SL G GP GE L D+A LG S+ + L LHTSGVHG EG+AGSAIQ LLSRL Sbjct: 5 FSIDYLQAKTRFVDLAKKI-NAHVFSLE-LKGTKGPKGEALTIDLAV--LGDVKCSTPKNIL--------LHTSGVHGVEGFAGSAIQIDLLSRL 87
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Match: A0A2E9Y9C3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y9C3_9PROT) HSP 1 Score: 52.8 bits (125), Expect = 8.430e-6 Identity = 37/93 (39.78%), Postives = 48/93 (51.61%), Query Frame = 1 Query: 19 FGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDVAAVDLGSRTLSSASSPLPTDSPTTFLHTSGVHGAEGYAGSAIQCALLS 297 F +A CR+ FL + L + ++ P A GPDG L TD + LG PTD+ + SG HGAEG+AGSAIQCA L+ Sbjct: 7 FRPDYAACREHFLNLSNVLGGELMRAINP---ASGPDGLELSTDF--LRLG-----------PTDAERALILVSGTHGAEGFAGSAIQCAWLA 83 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101364.292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101364.292.1 >prot_M-pyrifera_M_contig101364.292.1 ID=prot_M-pyrifera_M_contig101364.292.1|Name=mRNA_M-pyrifera_M_contig101364.292.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp PRERGGFGRSFAECRDRFLEAARCLPRCRLYSLAPFAGAVGPDGEPLVTDback to top mRNA from alignment at M-pyrifera_M_contig101364:192..563+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101364.292.1 ID=mRNA_M-pyrifera_M_contig101364.292.1|Name=mRNA_M-pyrifera_M_contig101364.292.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig101364:192..563+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101364:192..563+ >mRNA_M-pyrifera_M_contig101364.292.1 ID=mRNA_M-pyrifera_M_contig101364.292.1|Name=mRNA_M-pyrifera_M_contig101364.292.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig101364:192..563+ (Macrocystis pyrifera P11B4 male)back to top |