mRNA_M-pyrifera_M_contig113535.2823.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A849YRD6_9DELT (Sulfatase-like hydrolase/transferase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A849YRD6_9DELT) HSP 1 Score: 68.6 bits (166), Expect = 3.730e-11 Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTSLAPLLAGAPGVERAHPILTRTAGPGEHVAIRFGDFKLIHETREGGPWHLFDLAADPGE 336
YDE++RVP+++R P + VVD PV+L D+ PT+++LF+L A SL PL+ G G PI+ A+ GD K+IH++R +FDLAADPGE
Sbjct: 518 YDELLRVPLIIRTPTRG----AKVVDAPVSLLDLGPTILDLFNLETPPHAMGQSLVPLMRGT-GTTLTRPIVAEAR---LKRAMLIGDTKVIHDSRMRTV-EVFDLAADPGE 620
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A7C2FF52_9PROT (Sulfatase domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2FF52_9PROT) HSP 1 Score: 65.5 bits (158), Expect = 1.880e-10 Identity = 52/127 (40.94%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTSLAPLLAG----APG------VERAHPILTRTAGPG-----EHVAIRFGDFKLIHETREGGPWHLFDLAADPGE 336
Y+E VRVP+++R P +PA VV P+ALAD+APT++EL + +APLL G AP + R H AG G E A+R G +KLI E E G LFDL DPGE
Sbjct: 70 YEEAVRVPLIVRWPGR--IPAGSVVSTPLALADLAPTVLELVGEPADGTLAPRGIAPLLLGETADAPADPEPIFLYRRHYSGEEEAGDGPYALGEKFAVREGRWKLI-EGPEEGTLELFDLERDPGE 193
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A833HGB7_9BACT (Sulfatase n=1 Tax=Thermoanaerobaculia bacterium TaxID=2651171 RepID=A0A833HGB7_9BACT) HSP 1 Score: 61.2 bits (147), Expect = 1.310e-8 Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTSLAPLLAGAPGVERAHPILTRTAGPGEHVAIRFGDFKLIHETREGGPWHLFDLAADPGE 336
Y+E+ RVP++LRLPA G+PA G ++ D+APTL++L L A A+ SLAP++ GA + A +L ++ E A+R D KLI +DL ADPGE
Sbjct: 303 YEEIARVPLILRLPARWGVPA-GPRATVASVVDLAPTLLDLIGLPPLAGATGRSLAPVVRGAE--DAARQVLIQSE---EGWALRAADAKLIARPDR---IEFYDLVADPGE 405
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A6L4ATS9_9BACT (Sulfatase-like hydrolase/transferase n=1 Tax=Thermoanaerobaculia bacterium TaxID=2651171 RepID=A0A6L4ATS9_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 1.800e-8 Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTSLAPLLAGAPGVERAHPILTRTAGPGEHVAIRFGDFKLIHETREGGPW--HLFDLAADPGE 336
YDE++RVP+++RLP G A G V PV L D+APTL+EL + SL PL+ G E A + + G A+R G +KL W LFDLA+DPGE
Sbjct: 324 YDELLRVPLLIRLPG--GEAAGGEVTLPVRLLDLAPTLLELAGVEAPPEFEGRSLLPLVRGTATRELA-ALASLDDGSDASHALRLGGWKL---------WDGRLFDLASDPGE 425
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A2D5ZQI1_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZQI1_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 3.660e-8 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASST---SLAPLLAGAPGVERAHPILTRTAGPGEHV-AIRFGDFKLIHETREGGPWH---LFDLAADPGE 336
Y+E+ VP++++ LP VVD PV L D+ PT++ DL G P SS SL + G + P+ + T G G V ++R GD+KLI +G LFDLA+DP E
Sbjct: 1299 YEEITHVPLIIKPAKTWMLPRRRVVDTPVELVDLMPTVL---DLVGAPPVSSVQGRSLVGAMKGDAPFDPERPVFSETRGYGSTVRSVRQGDWKLILSEADGSAERAIELFDLASDPNE 1414
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A534Z283_9DELT (Sulfatase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Z283_9DELT) HSP 1 Score: 59.7 bits (143), Expect = 4.750e-8 Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTSLAPLLAGAPGVERA-HPILTRTAGPG-EHVAIRFGDFKLIHETREGGPWHLFDLAADPGEE 339
YDE++RVP++LRLP +PA V V+L D+ PTL++L + A SL PLL A P+ G E V +R+ +K + + G +DL ADPGE+
Sbjct: 494 YDEVLRVPLILRLPRI--VPAGLRVPVQVSLVDLMPTLLDLLHIPVPDTAQGRSLVPLLGDPRAAAFASRPVFAELKVAGLEAVGVRYAGYKWVFPRQPGAQVETYDLGADPGEQ 606
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A6M1MJS5_9RHOB (Sulfatase-like hydrolase/transferase n=1 Tax=Rhodobacter sp. SGA-6-6 TaxID=2710882 RepID=A0A6M1MJS5_9RHOB) HSP 1 Score: 58.9 bits (141), Expect = 8.440e-8 Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTSLAPLLAGAPGVERAHPILTRTAGPGEHVAIRFGDFKLIHETREGG--PWHLFDLAAD 327
+++ + VP V+ P PA VV+ PVAL D+ PTL++ L A+ SL P++ GA +RA P G V IR GD+++I G W LFDL D
Sbjct: 302 WEQALHVPFVIFDPTQ---PAGRVVEDPVALVDLGPTLLDFAGLAPPPAAAGRSLRPMMQGARDPDRAIPSFY-----GHSVTIRKGDYRIIRYASAPGVEDWQLFDLRTD 404
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A3M1EKM2_9CHLR (DUF4976 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1EKM2_9CHLR) HSP 1 Score: 58.5 bits (140), Expect = 1.160e-7 Identity = 45/115 (39.13%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPAS-STSLAPLLAGAPGV-ERAHPILTRTAGPGEH-VAIRFGDFKLIHETREGGPWHLFDLAADPGE 336
YDE+VRVP+V+R+P GL V+ VA D APT+++L + + P SL P L G+ V ER I GP H +A+R K IH + L+DL ADP E
Sbjct: 306 YDEIVRVPLVMRIP---GLEQPKVISRLVAHIDFAPTILDLVGISEKDPRMCGKSLLPFLDGSGDVPEREWVISEMVMGPKSHYLAVRTLTHKYIHWMAKPQEPELYDLTADPEE 417
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A523PHV5_9BACT (Sulfatase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PHV5_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 2.220e-7 Identity = 52/124 (41.94%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGG-RAPASSTSLAPLLA--GAPGVERAHPILTRTA--------GPGE-HVAIRFGDFKLIHETREGGPWHLFDLAADPGE 336
Y+EMVR+P+V P +S +P VVD PV L DV PTL++L L R SL LL GA R + R+ P + H AIR G KL+ TR GG L+DL ADPGE
Sbjct: 403 YEEMVRIPLVFYAP-ESPIPVGQVVDAPVTLLDVMPTLIDLCALEPPRHRLRGASLVGLLESHGASVRSRPESFVPRSIFMTSRYKDDPAKLHAAIRIGRHKLV--TR-GGRAFLYDLVADPGE 522
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Match: A0A1R1DEM5_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus sp. FSL H8-0548 TaxID=1920422 RepID=A0A1R1DEM5_9BACL) HSP 1 Score: 56.6 bits (135), Expect = 5.500e-7 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1
Query: 1 YDEMVRVPMVLRLP----ADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPAS--STSLAPLLAGAPGVERAHPILTRTAGP--GEHVA--IRFGDFKLIHETREGGPWHLFDLAADPGE 336
YD++VRVP+++R+P A++GL V + D+ PTL+EL DL R P +SL PLLAGA E I++ G G + IR D+K I + L+DLA DPGE
Sbjct: 308 YDDVVRVPLIIRMPGSQEAEAGLHCDQFVYN---FLDLPPTLLELLDLQTRDPGDLQGSSLVPLLAGAERAEWRDAIVSTYNGQQFGLYTLRMIRTADWKYIWNLSDVD--ELYDLAGDPGE 424 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113535.2823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113535.2823.1 >prot_M-pyrifera_M_contig113535.2823.1 ID=prot_M-pyrifera_M_contig113535.2823.1|Name=mRNA_M-pyrifera_M_contig113535.2823.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp MVRVPMVLRLPADSGLPASGVVDHPVALADVAPTLMELFDLGGRAPASSTback to top mRNA from alignment at M-pyrifera_M_contig113535:238..576- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113535.2823.1 ID=mRNA_M-pyrifera_M_contig113535.2823.1|Name=mRNA_M-pyrifera_M_contig113535.2823.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=339bp|location=Sequence derived from alignment at M-pyrifera_M_contig113535:238..576- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113535:238..576- >mRNA_M-pyrifera_M_contig113535.2823.1 ID=mRNA_M-pyrifera_M_contig113535.2823.1|Name=mRNA_M-pyrifera_M_contig113535.2823.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig113535:238..576- (Macrocystis pyrifera P11B4 male)back to top |