mRNA_M-pyrifera_M_contig113498.2814.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: UPI000644A75F (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A75F) HSP 1 Score: 142 bits (358), Expect = 5.190e-40 Identity = 72/134 (53.73%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 1 DFNGVIDFQEFCSLYAKIYTNPELPISMGYKGVTKTA-VLEDGSNAPKIEKVKVILNDEELAACRAKFEKFDADKSGTIDAAELKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKMYA 399
+FNGVI+F+EF SLY+KI+ NPELPI MGYK + LE G+NAPK+ +V+L D ELA R F+K+DA+KSGTID EL +LL+ TI K++ EMM+ R VD + L DKD++G+IDF+EF +++ K+ A
Sbjct: 83 NFNGVIEFEEFASLYSKIHLNPELPIHMGYKKSPEVHHTLETGANAPKVVHQEVVLTDAELAEARVAFDKYDANKSGTIDRTELAQLLRATIAKRVGEMMMTRLVDSHMQLADKDNSGEIDFNEFIVIFKKVLA 216
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: F4Q1A1_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1A1_CAVFA) HSP 1 Score: 141 bits (356), Expect = 1.010e-39 Identity = 72/132 (54.55%), Postives = 93/132 (70.45%), Query Frame = 1
Query: 1 DFNGVIDFQEFCSLYAKIYTNPELPISMGYK-GVTKTAVLEDGSNAPKIEKVKVILNDEELAACRAKFEKFDADKSGTIDAAELKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKM 393
DFNGVIDF EFCSLY+KIY NPELPISM K G LE G NAPK++ V V L + E+ R F+K+D D SGTID +ELKEL+KE++ +KM ++++ R VD + L DKD +G IDF+EF +Y K+
Sbjct: 65 DFNGVIDFNEFCSLYSKIYLNPELPISMRAKPGAAPYKHLETGDNAPKVKHVTVELTEAEIEEARVVFQKYDKDNSGTIDRSELKELVKESLTRKMGDILVNRLVDSNMQLADKDGSGAIDFNEFIAIYGKL 196
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: D3BGZ3_POLPP (Putative importin subunit alpha A n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BGZ3_POLPP) HSP 1 Score: 109 bits (273), Expect = 3.190e-25 Identity = 60/132 (45.45%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 1 DFNGVIDFQEFCSLYAKIYTNPELPISMGYKGVTKT-AVLEDGSNAPKIEKVKVILNDEELAACRAKFEKFDADKSGTIDAAELKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKM 393
+FNGVIDF EF SLY KI+ NPELPI + K + LE G APK+E + L D E+ +A+F+K+D D SG ID EL +LL+ETI KKM +M+ R VD + L DEF ++Y K+
Sbjct: 592 NFNGVIDFDEFVSLYKKIHINPELPIHLQAKQSPEVHRTLETGDGAPKVESKVITLTDAEMVDAQAQFKKYDKDNSGKIDRQELADLLRETIAKKMGNLMMNRLVDSHMQLAXXXXXXXXXXDEFIIIYKKI 723
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: D2VRX1_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRX1_NAEGR) HSP 1 Score: 79.7 bits (195), Expect = 1.210e-15 Identity = 51/140 (36.43%), Postives = 76/140 (54.29%), Query Frame = 1
Query: 1 DFNGVIDFQEFCSLYAKIYTNPELPISMGYKGVTKTAVLEDGSNAPKIEKV------KVILNDEELAACRAKFEKFDADKSGTIDAAELKELLKETIGK--KMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKMY 396
D N VIDF EF LY +Y +PELPISM + K E +N+P + K L+++E + F+KFD DKSGTID +E+ +LL+ + KMS+++ R V+M + D+ FDEF +Y ++
Sbjct: 63 DKNQVIDFNEFVKLYTTLYFSPELPISMKVQYNVKKNYAEPHTNSPSGSGLESKLLQKKPLSEQERIKAKQTFDKFDLDKSGTIDRSEMAKLLESVYNENGKMSKVLFNRLVEMHMQ--KAGDDNVFSFDEFLSIYRNIF 200
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: A0A6A5BX93_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BX93_NAEFO) HSP 1 Score: 74.7 bits (182), Expect = 1.020e-13 Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 1
Query: 7 NGVIDFQEFCSLYAKIYTNPELPISMGYKGVTK------TAVLEDGSNAPKIEKVKVILNDEELAACRAKFEKFDADKSGTIDAAELKELLKETIGK--KMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKMY 396
N VID+ EF LY +Y +PELPISM + + T + AP + + K + E+ A + F+KFD DKSGTID E+ +LL+ + KMS+++ R VDM +N +N F+EF +Y ++
Sbjct: 70 NNVIDYDEFVKLYTTLYFSPELPISMRLENKSSSFRKEPTTSTPSNTVAPPLPQKKPLTEQEKRKAKQC-FDKFDLDKSGTIDRNEMSKLLESVYNENGKMSKVLFNRLVDMHMN--KAGNNNVFSFNEFLGIYRNIF 204
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: A0A7S4K864_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K864_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 1.940e-7 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 172 EELAACRAKFEKFDADKSGTIDAAE---LKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFT-LLYAKMYAAKE 408
+++ R F+K+D D SGTID E L + L+ T KMS+ M++RY + DKDD+G+IDFDEF LY ++
Sbjct: 8 QQIEIARLAFDKYDLDGSGTIDRGEILCLMQHLQRTGVLKMSDAMLRRYCNQNFKQIDKDDSGEIDFDEFLEFLYGSSVLTRD 90
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: A0A7M7HJ16_STRPU (Uncharacterized protein n=4 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HJ16_STRPU) HSP 1 Score: 57.4 bits (137), Expect = 6.070e-7 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 175 ELAACRAKFEKFDADKSGTIDAAELKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKMY 396
++A +AKFEK+D DKSG+ID EL+ L + M++RYV + DKD + IDFDEF +Y +++
Sbjct: 159 QIADAKAKFEKYDLDKSGSIDKNELRNLFVDMFPN-FHRNMLERYVQDEFQAGDKDFSSVIDFDEFLAMYRRLF 231
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: A0A7S4K812_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K812_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 8.480e-7 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 172 EELAACRAKFEKFDADKSGTIDAAE---LKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFT-LLYAKMYAAKE 408
+++ R F+K+D D SGTID E L + L+ T KMS+ M++RY + DKDD+G+IDFDEF LY ++
Sbjct: 111 QQIEIARLAFDKYDLDGSGTIDRGEILCLMQHLQRTGVLKMSDAMLRRYCNQNFKQIDKDDSGEIDFDEFLEFLYGSSVLTRD 193
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Match: UPI001BB1C460 (centrosomal protein 43-like isoform X1 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1C460) HSP 1 Score: 54.3 bits (129), Expect = 7.160e-6 Identity = 33/99 (33.33%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 100 TKTAVLEDGSNAPKIEKVKVILNDEELAACRAKFEKFDADKSGTIDAAELKELLKETIGKKMSEMMIKRYVDMQLNLWDKDDNGQIDFDEFTLLYAKMY 396
+ TA+ E+ PK L ++A + KFEK+D +KSG+ID EL+ L + M++RYV + + DKD + IDF+EF +Y +++
Sbjct: 140 SSTAIDEEAVAIPKD------LTSAQIADAKEKFEKYDVNKSGSIDKDELRSLFVDMFPN-FHRNMLERYVQDEFHAGDKDFSSVIDFEEFLAMYRRLF 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113498.2814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113498.2814.1 >prot_M-pyrifera_M_contig113498.2814.1 ID=prot_M-pyrifera_M_contig113498.2814.1|Name=mRNA_M-pyrifera_M_contig113498.2814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp DFNGVIDFQEFCSLYAKIYTNPELPISMGYKGVTKTAVLEDGSNAPKIEKback to top mRNA from alignment at M-pyrifera_M_contig113498:5..519- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113498.2814.1 ID=mRNA_M-pyrifera_M_contig113498.2814.1|Name=mRNA_M-pyrifera_M_contig113498.2814.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=515bp|location=Sequence derived from alignment at M-pyrifera_M_contig113498:5..519- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113498:5..519- >mRNA_M-pyrifera_M_contig113498.2814.1 ID=mRNA_M-pyrifera_M_contig113498.2814.1|Name=mRNA_M-pyrifera_M_contig113498.2814.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig113498:5..519- (Macrocystis pyrifera P11B4 male)back to top |