prot_M-pyrifera_M_contig113352.2791.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113352.2791.1
Unique Nameprot_M-pyrifera_M_contig113352.2791.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
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BLAST of mRNA_M-pyrifera_M_contig113352.2791.1 vs. uniprot
Match: A0A5C6AJX2_9BACT (Uncharacterized protein n=1 Tax=Botrimarina colliarenosi TaxID=2528001 RepID=A0A5C6AJX2_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 6.720e-8
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:    1 NATSGASEYDFLLDNFMVEIFGSNEGGDNCPGDANGDGTVDLLDLDI 47
            NATSGASE+DFLLDNF+VE+ GSN G    PGD NGD  VD  D  +
Sbjct:  409 NATSGASEFDFLLDNFLVEVNGSNAG---LPGDYNGDNVVDAADYTV 452
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BLAST of mRNA_M-pyrifera_M_contig113352.2791.1 vs. uniprot
Match: A0A517THN1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium MalM25 TaxID=2527998 RepID=A0A517THN1_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.510e-6
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0 
Query:    1 NATSGASEYDFLLDNFMVEIFGSNEGGDNCPGDANGDGTVDLLDLDILGSNFGS 54
            NA+SG  E+DF++DNF VE+ GSNE     PGD NGD TVD  D  +   N G+
Sbjct:  398 NASSGGGEFDFIMDNFTVEVEGSNEA---LPGDFNGDLTVDAADYTVWRDNLGA 448
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113352.2791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5C6AJX2_9BACT6.720e-863.83Uncharacterized protein n=1 Tax=Botrimarina collia... [more]
A0A517THN1_9BACT1.510e-651.85Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013424PEP-CTERM protein-sorting domainPFAMPF07589PEP-CTERMcoord: 90..112
e-value: 2.2E-4
score: 21.1
IPR013424PEP-CTERM protein-sorting domainTIGRFAMTIGR02595TIGR02595coord: 91..112
e-value: 2.2E-4
score: 19.9
IPR036439Dockerin domain superfamilyGENE3D1.10.1330.10coord: 28..92
e-value: 4.7E-12
score: 47.2
IPR036439Dockerin domain superfamilySUPERFAMILY63446Type I dockerin domaincoord: 35..83
IPR002105Dockerin type I repeatPROSITEPS00448CLOS_CELLULOSOME_RPTcoord: 63..82
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113352contigM-pyrifera_M_contig113352:149..493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113352.2791.1mRNA_M-pyrifera_M_contig113352.2791.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113352 149..493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113352.2791.1 ID=prot_M-pyrifera_M_contig113352.2791.1|Name=mRNA_M-pyrifera_M_contig113352.2791.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
NATSGASEYDFLLDNFMVEIFGSNEGGDNCPGDANGDGTVDLLDLDILGS
NFGSTGTTFAQGDFNEDGTVDLLDLDILGSNFGMSKSSTSIPEPTSLLMI
ASVALATALRRRAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013424PEP_exosort_dom
IPR036439Dockerin_dom_sf
IPR002105Dockerin_1_rpt
IPR018247EF_Hand_1_Ca_BS