mRNA_M-pyrifera_M_contig101312.276.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: D3Q9A0_STANL (Acyl-CoA dehydrogenase domain protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / CIP 108903 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) TaxID=446470 RepID=D3Q9A0_STANL) HSP 1 Score: 139 bits (349), Expect = 3.340e-37 Identity = 74/108 (68.52%), Postives = 89/108 (82.41%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQ 324 +++RANIQDWIAEARI+ID ARLLTL+TA +MDT G++AAA E+S IKV + A VIDRAIQV G AGV+DD PLA +A LR+LR+ADGPDEVH AIARRELR+ Sbjct: 293 LSTRANIQDWIAEARIEIDMARLLTLKTAYLMDTMGNQAAATEISAIKVAAPQAALNVIDRAIQVHGGAGVTDDFPLAMAWAHLRALRLADGPDEVHKRAIARRELRK 400
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A857L457_9ACTN (Acyl-CoA dehydrogenase n=4 Tax=Gordonia TaxID=2053 RepID=A0A857L457_9ACTN) HSP 1 Score: 138 bits (347), Expect = 6.340e-37 Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQQAAA 336 +A RANIQDWIAEARIDI+ RLLTL+ A +MDT G+K AA E++ IKV A ++DRAIQVFG GV+DDVPLA YA LR+LR+ADGPDEVH AIARRELR A Sbjct: 275 LADRANIQDWIAEARIDIEMVRLLTLKAAHMMDTVGNKQAATEIAAIKVAAPNVALKIVDRAIQVFGGMGVTDDVPLAAFYAHLRTLRLADGPDEVHKRAIARRELRPYVKA 386
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A6G3S843_9ACTN (Acyl-CoA dehydrogenase n=5 Tax=Streptomyces TaxID=1883 RepID=A0A6G3S843_9ACTN) HSP 1 Score: 138 bits (347), Expect = 6.680e-37 Identity = 74/113 (65.49%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQQAAAR 339 VA RANIQDWIAE+RI+ID ARLLTL+ A +MDT G+K A E++ IKV A V+DRAIQV G AGVSDD PLA MYA LR+LR+ADGPDEVH IARRELR++ R Sbjct: 291 VADRANIQDWIAESRIEIDMARLLTLKAAYLMDTVGNKQARTEIAAIKVAAPEVALKVVDRAIQVHGGAGVSDDFPLASMYAHLRTLRLADGPDEVHKRTIARRELRRRQTER 403
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A3D1L503_9MICO (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Janibacter terrae TaxID=103817 RepID=A0A3D1L503_9MICO) HSP 1 Score: 130 bits (327), Expect = 1.190e-36 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQQA 330 +A+RANI DW+AE+RI+I+ ARLLTL+ A +MDT G+K A E++ IKV A VIDRAIQV G GVSDD PLA YA +R+LR+ADGPDEVH M IARRE R+++ Sbjct: 33 IANRANIMDWVAESRIEIEMARLLTLKAAHMMDTVGNKVARTEIAAIKVAAPNVALKVIDRAIQVHGGGGVSDDFPLAMWYAHMRTLRLADGPDEVHKMTIARREYRRRS 142
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A7W0L109_9ACTN (Acyl-CoA dehydrogenase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0L109_9ACTN) HSP 1 Score: 137 bits (344), Expect = 1.810e-36 Identity = 72/108 (66.67%), Postives = 84/108 (77.78%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQ 324 VA R+NI DWIAEARID++ RLLT +TA +MDT G+KAAA E+S IKV A ++DRAIQV GA GV DD PLA MYA LR+LR+ADGPDEVH M IARRELR+ Sbjct: 291 VAERSNIMDWIAEARIDLEMVRLLTFKTAWMMDTVGNKAAAVEISAIKVAAPNVALRIVDRAIQVHGAGGVCDDFPLASMYAHLRTLRLADGPDEVHKMTIARRELRK 398
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A6I1YRY2_9ACTN ((R)-benzylsuccinyl-CoA dehydrogenase n=2 Tax=Streptomyces sp. RB17 TaxID=2585197 RepID=A0A6I1YRY2_9ACTN) HSP 1 Score: 137 bits (344), Expect = 1.840e-36 Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQQAAAR 339 +A RANIQDWIAEARI+ID ARLLTL+ A +MDT G+K A E++ IKV A VIDRAIQV G AGVSDD PLA MYA LR+LR+ADGPDEVH IA RELR++ A R Sbjct: 291 LAERANIQDWIAEARIEIDMARLLTLQAAHLMDTVGNKEARTEIAAIKVAAPDIALRVIDRAIQVHGGAGVSDDFPLASMYAHLRTLRLADGPDEVHKRTIAHRELRRREAER 403
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A538KX70_9ACTN (Acyl-CoA dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538KX70_9ACTN) HSP 1 Score: 137 bits (344), Expect = 2.250e-36 Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQQA 330 VA+R+N+QDWIAE+RI+I+ ARLLT++TA +MDT G+K A E++ IKV + A VIDRAIQV G GVSDD PLA MYA +R+LR+ADGPDEVH M IARRELR+ A Sbjct: 292 VATRSNVQDWIAESRIEIEMARLLTMKTAWLMDTVGNKHARTEIAAIKVAAPQVALKVIDRAIQVHGGGGVSDDFPLASMYAHMRTLRLADGPDEVHKMTIARRELRRHA 401
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: UPI0016670985 (acyl-CoA dehydrogenase family protein n=1 Tax=Gordonia jinhuaensis TaxID=1517702 RepID=UPI0016670985) HSP 1 Score: 137 bits (344), Expect = 2.360e-36 Identity = 72/108 (66.67%), Postives = 85/108 (78.70%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQ 324 +A RANIQDWIAEARIDI+ RLLTL+ A +MDT G+KAAA E++ IKV A +IDRAIQV G AGV+DD PLA YA +R+LR+ADGPDEVH AIARRELR+ Sbjct: 292 LAERANIQDWIAEARIDIEMVRLLTLKAAEMMDTVGNKAAATEIAAIKVAAPNVALKIIDRAIQVHGGAGVTDDFPLAMAYAHIRTLRLADGPDEVHKRAIARRELRK 399
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: H6MTC1_GORPV (Putative acyl-CoA dehydrogenase n=6 Tax=Gordonia TaxID=2053 RepID=H6MTC1_GORPV) HSP 1 Score: 136 bits (343), Expect = 3.360e-36 Identity = 74/112 (66.07%), Postives = 85/112 (75.89%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQQAAA 336 +A RANIQDWIAEARIDI+ RLLTL+ A +MDT G+KAAA E++ IKV A +IDRAIQV G AGV+DD PLA YA LR+LR+ADGPDEVH AIARRELR A Sbjct: 292 LADRANIQDWIAEARIDIEMVRLLTLKAAYMMDTVGNKAAATEIAAIKVAAPNMALKIIDRAIQVHGGAGVTDDFPLAMAYAHLRTLRLADGPDEVHKRAIARRELRSYREA 403
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Match: A0A2Z3YWZ7_9CORY ((R)-benzylsuccinyl-CoA dehydrogenase n=4 Tax=Corynebacterium TaxID=1716 RepID=A0A2Z3YWZ7_9CORY) HSP 1 Score: 136 bits (342), Expect = 3.870e-36 Identity = 70/108 (64.81%), Postives = 88/108 (81.48%), Query Frame = 1 Query: 1 VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHVMRTATTVIDRAIQVFGAAGVSDDVPLARMYAQLRSLRIADGPDEVHLMAIARRELRQ 324 ++ R NI+DWIAEARI I++ARLLT++ A +MDT G+KAA E++ IKV RTA ++DRAIQVFG GV+DD PLA+MYA LR+LR+ADGPDEVHLM IAR ELR+ Sbjct: 293 LSDRDNIRDWIAEARISIESARLLTMKAAWMMDTVGNKAARQEIAAIKVLAPRTALRIVDRAIQVFGGEGVTDDTPLAQMYAGLRTLRLADGPDEVHLMTIARTELRR 400 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101312.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101312.276.1 >prot_M-pyrifera_M_contig101312.276.1 ID=prot_M-pyrifera_M_contig101312.276.1|Name=mRNA_M-pyrifera_M_contig101312.276.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp VASRANIQDWIAEARIDIDAARLLTLRTASIMDTDGDKAAAPEMSVIKVHback to top mRNA from alignment at M-pyrifera_M_contig101312:322..663- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101312.276.1 ID=mRNA_M-pyrifera_M_contig101312.276.1|Name=mRNA_M-pyrifera_M_contig101312.276.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig101312:322..663- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101312:322..663- >mRNA_M-pyrifera_M_contig101312.276.1 ID=mRNA_M-pyrifera_M_contig101312.276.1|Name=mRNA_M-pyrifera_M_contig101312.276.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig101312:322..663- (Macrocystis pyrifera P11B4 male)back to top |