mRNA_M-pyrifera_M_contig101262.271.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A7X5WSX8_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WSX8_9ACTN) HSP 1 Score: 243 bits (620), Expect = 7.020e-80 Identity = 116/151 (76.82%), Postives = 132/151 (87.42%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNE 453 LTLIQTGKS PAP+VLLDPPGGTYW RW+EFVEIEL + GLI+ DLALV+VTDSI+EAV+E+C FYRTYHSIR VGSRLVLRLRR +DD ELA LN RF HI+ +G IERI ATE E+RDDDHV L R+AFRFDRRSW+GVR++IDALNE Sbjct: 26 LTLIQTGKSVPAPVVLLDPPGGTYWTRWKEFVEIELLEPGLISADDLALVKVTDSIEEAVEEVCRFYRTYHSIRFVGSRLVLRLRREVDDGELAELNGRFAHIVERGTIERIPATEAEVRDDDHVDLPRLAFRFDRRSWAGVRMLIDALNE 176
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A3M2G1G2_ACTSX (LOG family protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G1G2_ACTSX) HSP 1 Score: 195 bits (495), Expect = 1.700e-59 Identity = 94/151 (62.25%), Postives = 112/151 (74.17%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNE 453 LTL+QTGK+ PAP+VL+DPPGGTYW RW +FV EL GLI+P D LV +TDS+DEAV +CGFYR YHS+R VGSRLV+RLRR + D LA L+ F I KG IERI+ TE E RDDD V L RIA RFDR W+ +R +IDA+NE Sbjct: 129 LTLMQTGKTPPAPVVLIDPPGGTYWHRWLDFVRTELEGHGLISPDDTGLVTLTDSVDEAVAVVCGFYRIYHSMRFVGSRLVIRLRRALSDEHLARLDRDFRDICEKGGIERIDTTEAERRDDDEVHLPRIALRFDRHHWARLRRLIDAINE 279
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A2E8LE51_9ACTN (TIGR00730 family Rossman fold protein (Fragment) n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LE51_9ACTN) HSP 1 Score: 193 bits (491), Expect = 8.620e-58 Identity = 88/154 (57.14%), Postives = 112/154 (72.73%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNENTP 462 LTLIQTGK+ PAP+VLLD PGGTYW W +FV EL + GLI+P D+ L RV +++EAVDE+C FYRTYHS+R VG L+ RL RP++D ELA L+E F ++ +G I I+AT+ E+ D DHV L RI F FD+ WS +R +ID LN NTP Sbjct: 218 LTLIQTGKTAPAPVVLLDEPGGTYWDHWYDFVTTELGNAGLISPDDMCLARVAHTVEEAVDEVCDFYRTYHSMRFVGDHLIFRLNRPVEDGELAALSEEFAPMIVQGGITAIDATKSEVHDGDHVDLPRIMFEFDKHQWSMLRRLIDRLNANTP 371
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A7C4TH58_9ACTN (LOG family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C4TH58_9ACTN) HSP 1 Score: 186 bits (471), Expect = 1.770e-55 Identity = 94/161 (58.39%), Postives = 110/161 (68.32%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNEN-TPDDLPPT 480 LTL+QTGK+ P+PIVLLD PGGTYWK WR FVE EL G + DL LVRVTD + EAVDE+ GFY YHS R VG RLVLRLRR DD L L E+F I+ +G IER++A E+ DDDH L R+A FDRR W +R +IDALN T DD P+ Sbjct: 130 LTLVQTGKAQPSPIVLLDVPGGTYWKTWRSFVEDELEQRGYVGEHDLCLVRVTDDVTEAVDELRGFYSNYHSQRFVGGRLVLRLRRAPDDETLEQLTEQFADIITRGSIERVQAAPVELADDDHPELDRVALWFDRRGWPRLRELIDALNGRPTNDDRRPS 290
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A520XQS2_9ACTN (LOG family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XQS2_9ACTN) HSP 1 Score: 181 bits (460), Expect = 1.920e-53 Identity = 88/150 (58.67%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALN 450 LTL+QTGK+ AP+VLLDPPG TYW+RWR FV EL +GLI+ D+ LV +T+S+++A +E+ FYRTYHS R VG RLV+R +R I D EL LN F I+ +G IERI AT+ EIRDDD++ LHRIAFRF+R ++ +RL+IDALN Sbjct: 194 LTLMQTGKTFLAPVVLLDPPGSTYWERWRAFVVDELLSDGLISEADMGLVFITNSVEDAANEVNRFYRTYHSSRAVGHRLVIRTKREIRDDELGALNRDFDDIIEEGAIERISATDSEIRDDDNLDLHRIAFRFNRHGYARLRLLIDALN 343
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A2E0ZTA4_9ACTN (Cytochrome D ubiquinol oxidase subunit II n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0ZTA4_9ACTN) HSP 1 Score: 178 bits (452), Expect = 3.120e-52 Identity = 86/155 (55.48%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNENTPD 465 LTL+QTGK+ AP+VLLDPPG TYW W EF + EL L++P DL+L+ TD A + + FYRTYHS+R+VG LVLRL R +DDAE+ATL+E FG +L G IER E T E+RDDD V R+ FDRRS + +R +IDALN+ TPD Sbjct: 192 LTLMQTGKTHLAPVVLLDPPGDTYWSHWTEFXQAELVARNLVSPHDLSLIHATDDPRAAAEHVRDFYRTYHSMRYVGRHLVLRLEREVDDAEVATLDEEFGDLLVDGHIERCETTSHELRDDDEVARPRLRLHFDRRSHARLRQLIDALNDATPD 346
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A7Y2DEC2_9ACTN (TIGR00730 family Rossman fold protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DEC2_9ACTN) HSP 1 Score: 176 bits (447), Expect = 1.840e-51 Identity = 90/151 (59.60%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNE 453 LTL+QTGK+ AP+VLLDPPG TYW WR+FV EL + G I TDL LV +TD I EAV+EIC FY +YHS+R VG RLVLRL R DAELA L + F I G +ER+ A++ EI DDDHV L RIAF FDR +RLMID LN+ Sbjct: 195 LTLMQTGKTYLAPVVLLDPPGDTYWDTWRDFVVKELLEPGYINGTDLKLVHITDDIPEAVNEICHFYSSYHSMRFVGKRLVLRLNREPSDAELAQLTKEFAPITVSGGVERVTASQSEIDDDDHVDLPRIAFHFDRHGNDKLRLMIDHLND 345
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A2E8LGZ5_9ACTN (Cytochrome D ubiquinol oxidase subunit II n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LGZ5_9ACTN) HSP 1 Score: 175 bits (444), Expect = 4.810e-51 Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNENTP 462 LTL+QTGK+ +P+VLLDPPG TYW W EFV EL D L++ DLALV TD A D +CGFYR +HS+R+VG LVLRL RP+ + ELA LN FG +L G IE IEAT E+ DDD + R+ FDRRS + +R +IDALN TP Sbjct: 192 LTLMQTGKTHLSPVVLLDPPGSTYWSHWTEFVRCELVDRNLVSDHDLALVHATDDPVAAADHVCGFYRAFHSMRYVGGHLVLRLERPVGEDELAGLNTAFGDLLVDGSIEAIEATPAEVADDDEIHRPRLRLHFDRRSHARLRQLIDALNAGTP 345
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A7V9BXR9_9ACTN (TIGR00730 family Rossman fold protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9BXR9_9ACTN) HSP 1 Score: 174 bits (441), Expect = 6.410e-51 Identity = 87/155 (56.13%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGE-IERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNENTP 462 LTL+QTGK+ PAPIVLLD PGGTYW+ WR FVE EL G + DL V VTD +D AVDE+ GFY YHS R VG +LV+RL + AELA L+E F I+ +G+ I+RIEAT E+ D+DHV L RI RFDRR+ + +R +ID LN P Sbjct: 157 LTLVQTGKTQPAPIVLLDVPGGTYWESWRSFVESELTGRGYVGKDDLDFVLVTDDVDTAVDEVTGFYANYHSQRFVGGKLVIRLHHAPEPAELAALSEEFADIVVRGDGIQRIEATPTEVADNDHVDLERIVLRFDRRNHARLRALIDRLNGFAP 311
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Match: A0A800IBB9_9ACTN (LOG family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBB9_9ACTN) HSP 1 Score: 173 bits (439), Expect = 2.630e-50 Identity = 82/151 (54.30%), Postives = 108/151 (71.52%), Query Frame = 1 Query: 1 LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVRVTDSIDEAVDEICGFYRTYHSIRHVGSRLVLRLRRPIDDAELATLNERFGHILAKGEIERIEATEPEIRDDDHVGLHRIAFRFDRRSWSGVRLMIDALNE 453 LTL+QTGKS +P+VLLDPPG TYW+RW +F+ EL + LI+ DLA + VT+ +A + +C FY T+HS R VG RLVLRL R ++DAEL+ LN FG +L G IERIE T E++D+D V LHR+A R+ R + +RLMIDALN+ Sbjct: 191 LTLMQTGKSPISPVVLLDPPGSTYWERWVDFIRAELLEGQLISENDLAFISVTNDPAQAANHLCHFYSTFHSTRFVGGRLVLRLNRMVEDAELSALNTEFGDLLESGSIERIEVTSAELKDNDQVSLHRLALRYHRAGQARLRLMIDALND 341 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101262.271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101262.271.1 >prot_M-pyrifera_M_contig101262.271.1 ID=prot_M-pyrifera_M_contig101262.271.1|Name=mRNA_M-pyrifera_M_contig101262.271.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp LTLIQTGKSTPAPIVLLDPPGGTYWKRWREFVEIELRDEGLIAPTDLALVback to top mRNA from alignment at M-pyrifera_M_contig101262:2..493+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101262.271.1 ID=mRNA_M-pyrifera_M_contig101262.271.1|Name=mRNA_M-pyrifera_M_contig101262.271.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig101262:2..493+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101262:2..493+ >mRNA_M-pyrifera_M_contig101262.271.1 ID=mRNA_M-pyrifera_M_contig101262.271.1|Name=mRNA_M-pyrifera_M_contig101262.271.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig101262:2..493+ (Macrocystis pyrifera P11B4 male)back to top |