mRNA_M-pyrifera_M_contig112788.2665.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A7X5WN89_9ACTN (Coproporphyrinogen III oxidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WN89_9ACTN) HSP 1 Score: 112 bits (279), Expect = 2.300e-27 Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 4 LRTELETTIGLSGDAAHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAVAD 231
LR EL TIG+ G+ RV+ WRR LPQYRPGHLDRCD+ID LA APG+V GA MRGLGLPACVRQGRAAVA
Sbjct: 378 LRRELAATIGMRGEPVVRVTPWRRSLPQYRPGHLDRCDRIDAELAASAPGLVATGAQMRGLGLPACVRQGRAAVAS 453
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A7K1Z8M4_9ACTN (Coproporphyrinogen III oxidase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8M4_9ACTN) HSP 1 Score: 109 bits (273), Expect = 1.510e-26 Identity = 51/71 (71.83%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 4 LRTELETTIGLSGDAAHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGR 216
LR EL TIGL G+ RV+ W + LPQYRPGHL+RCDQID +L R+APGV VAGASMRGLGLPACVRQ R
Sbjct: 374 LRQELALTIGLQGECVARVTPWHQSLPQYRPGHLERCDQIDSYLEREAPGVTVAGASMRGLGLPACVRQAR 444
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A2E8L966_9ACTN (Amino_oxidase domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L966_9ACTN) HSP 1 Score: 97.1 bits (240), Expect = 8.820e-24 Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 1 RLRTELETTIGLSGDAAHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAVA 228
+L EL T+GL + R++ WR+ LPQYRPGH+ RCD+ID LA A G++VAGA MRGLGLPACVRQGRA+ A
Sbjct: 85 QLGAELALTVGLHTEPVTRITPWRQSLPQYRPGHMARCDEIDTELALVAEGLIVAGAQMRGLGLPACVRQGRASAA 160
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A2E0SYI9_9ACTN (Coproporphyrinogen III oxidase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SYI9_9ACTN) HSP 1 Score: 100 bits (249), Expect = 3.950e-23 Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 1 RLRTELETTIGLSGDAAHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAVADS 234
+L ELE T+GL + R++ WR+ LPQYRPGH+ RC +ID LA A G+VVAGA MRGLGLPACVRQGRAAVA +
Sbjct: 377 QLGAELEQTVGLHAEPVTRITPWRQSLPQYRPGHMARCAEIDTELALVAEGLVVAGAQMRGLGLPACVRQGRAAVAGT 454
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A3M2G2H5_ACTSX (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G2H5_ACTSX) HSP 1 Score: 87.0 bits (214), Expect = 1.640e-20 Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 1 RLRTELETTIGLSGD-AAHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAV 225
RL E + T+G++G A RV+ W LPQYRPGHL+R +IDE LA + PG VVAGA+ GLGLPACV QGR A
Sbjct: 24 RLLAEADATLGVTGPPVAVRVTPWLAALPQYRPGHLERAREIDELLAAEHPGAVVAGAACHGLGLPACVAQGRRAA 99
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A5Q2RQG3_9ACTN (Coproporphyrinogen III oxidase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RQG3_9ACTN) HSP 1 Score: 84.7 bits (208), Expect = 1.990e-17 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 13 ELETTIGLSGDAAH-RVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAVAD 231
+L TT+ L+G+ + RV+ W R PQY PGHL+R D ID LAR+APG+ +AGA+ RG+G+PAC+ G A A+
Sbjct: 392 DLRTTMDLAGEPSEVRVTRWPRAFPQYTPGHLERVDAIDATLAREAPGIALAGAAYRGVGIPACINSGHQAAAE 465
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A6N7FUS3_9ACTN (Coproporphyrinogen III oxidase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FUS3_9ACTN) HSP 1 Score: 83.2 bits (204), Expect = 7.100e-17 Identity = 41/75 (54.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query: 4 LRTELETTIGLSGDAAH-RVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAV 225
LR +L TT+G+ + A RV+ W LPQYRPGHLDR ++ LA APGVV GA+ RG+GLPAC+ QGR A
Sbjct: 391 LRADLRTTMGIDAEPAQVRVTPWPASLPQYRPGHLDRLASLEASLAGAAPGVVATGAAFRGVGLPACIDQGRQAA 465
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A2N5JV27_9ACTN (Coproporphyrinogen III oxidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JV27_9ACTN) HSP 1 Score: 83.2 bits (204), Expect = 7.340e-17 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 1 RLRTELETTIGLSGDA-AHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAV 225
RL ELE +GL + A RV+ W PQYRPGHL R +I+ LARDAP V +AGA++RG+G+PAC+ QGRAA
Sbjct: 415 RLHHELEQALGLRREPLAGRVTRWAGAFPQYRPGHLARVARIEAALARDAPSVQLAGAALRGVGIPACIAQGRAAA 490
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A6B1H3C9_9ACTN (Coproporphyrinogen III oxidase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H3C9_9ACTN) HSP 1 Score: 80.5 bits (197), Expect = 6.120e-16 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 4 LRTELETTIGLSGDAAH-RVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAVADS 234
+RT+L T+GL+ + R+S W R LPQ+RPGHL+ I++ LA DAP V V GA RGLG+PAC+ QGR A S
Sbjct: 359 VRTDLAATMGLNAEPHEVRISRWERSLPQFRPGHLELVADIEQSLANDAPWVQVTGAWARGLGIPACIHQGRQAAQAS 436
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Match: A0A6N8YAV1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YAV1_9ACTN) HSP 1 Score: 74.7 bits (182), Expect = 1.410e-15 Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 55 RVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPGVVVAGASMRGLGLPACVRQGRAAV 225
RV+ W R LPQYRPGHL+R +D LA PG+V GA+ RGLGLPACVR RAA
Sbjct: 49 RVTPWLRSLPQYRPGHLERVAAVDACLADGTPGLVATGAAFRGLGLPACVRDARAAA 105 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112788.2665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112788.2665.1 >prot_M-pyrifera_M_contig112788.2665.1 ID=prot_M-pyrifera_M_contig112788.2665.1|Name=mRNA_M-pyrifera_M_contig112788.2665.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp RLRTELETTIGLSGDAAHRVSEWRRCLPQYRPGHLDRCDQIDEWLARDAPback to top mRNA from alignment at M-pyrifera_M_contig112788:15..254+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112788.2665.1 ID=mRNA_M-pyrifera_M_contig112788.2665.1|Name=mRNA_M-pyrifera_M_contig112788.2665.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig112788:15..254+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112788:15..254+ >mRNA_M-pyrifera_M_contig112788.2665.1 ID=mRNA_M-pyrifera_M_contig112788.2665.1|Name=mRNA_M-pyrifera_M_contig112788.2665.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig112788:15..254+ (Macrocystis pyrifera P11B4 male)back to top |